RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 OR2D3Q8NGH3 330 aa3.22□□□□□ -1.89
ATXN3-220ENST00000553491 RASL10AQ92737 203 aa3.22□□□□□ -1.89
ATXN3-220ENST00000553491 VSIG2Q96IQ7 327 aa3.22□□□□□ -1.89
ATXN3-220ENST00000553491 TXNDC17Q9BRA2 123 aa3.22□□□□□ -1.89
ATXN3-220ENST00000553491 PRADC1Q9BSG0 188 aa3.22□□□□□ -1.89
ATXN3-220ENST00000553491 JPT2Q9H910 190 aa3.22□□□□□ -1.89
ATXN3-220ENST00000553491 Q9HAA7 133 aa3.22□□□□□ -1.89
ATXN3-220ENST00000553491 LINC00588Q9Y4M8 146 aa3.22□□□□□ -1.89
ATXN3-220ENST00000553491 CSMD3Q7Z407 3707 aa3.21□□□□□ -1.9
ATXN3-220ENST00000553491 A0A087WWC5 75 aa3.21□□□□□ -1.9
ATXN3-220ENST00000553491 TRBV6-1A0A0K0K1D8 114 aa3.21□□□□□ -1.9
ATXN3-220ENST00000553491 COLCA2A8K830 154 aa3.21□□□□□ -1.9
ATXN3-220ENST00000553491 ZNF727A8MUV8 499 aa3.21□□□□□ -1.9
ATXN3-220ENST00000553491 A8MWV9 139 aa3.21□□□□□ -1.9
ATXN3-220ENST00000553491 RS1O15537 224 aa3.21□□□□□ -1.9
ATXN3-220ENST00000553491 S100A6P06703 90 aa3.21□□□□□ -1.9
ATXN3-220ENST00000553491 MGPP08493 103 aa3.21□□□□□ -1.9
ATXN3-220ENST00000553491 RNASE3P12724 160 aaKnown RBP3.21□□□□□ -1.9
ATXN3-220ENST00000553491 ADCYAP1P18509 176 aa3.21□□□□□ -1.9
ATXN3-220ENST00000553491 TAGLN2P37802 199 aaKnown RBP3.21□□□□□ -1.9
ATXN3-220ENST00000553491 CFAP126Q5VTH2 177 aa3.21□□□□□ -1.9
ATXN3-220ENST00000553491 LYPD5Q6UWN5 251 aa3.21□□□□□ -1.9
ATXN3-220ENST00000553491 NEGR1Q7Z3B1 354 aa3.21□□□□□ -1.9
ATXN3-220ENST00000553491 LINC00612Q8N6U2 182 aa3.21□□□□□ -1.9
ATXN3-220ENST00000553491 C9orf85Q96MD7 179 aa3.21□□□□□ -1.9
ATXN3-220ENST00000553491 IL36BQ9NZH7 164 aa3.21□□□□□ -1.9
ATXN3-220ENST00000553491 XKRY2A2RUG3 117 aa3.2□□□□□ -1.9
ATXN3-220ENST00000553491 KRTAP9-6A8MVA2 160 aa3.2□□□□□ -1.9
ATXN3-220ENST00000553491 GATCO43716 136 aaKnown RBP3.2□□□□□ -1.9
ATXN3-220ENST00000553491 S100PP25815 95 aa3.2□□□□□ -1.9
ATXN3-220ENST00000553491 RPS20P60866 119 aaKnown RBP3.2□□□□□ -1.9
ATXN3-220ENST00000553491 ZNF56Q15929 161 aa3.2□□□□□ -1.9
ATXN3-220ENST00000553491 OR10J3Q5JRS4 329 aa3.2□□□□□ -1.9
ATXN3-220ENST00000553491 SOHLH1Q5JUK2 328 aa3.2□□□□□ -1.9
ATXN3-220ENST00000553491 C1orf134Q5TEV5 83 aa3.2□□□□□ -1.9
ATXN3-220ENST00000553491 ZFP82Q8N141 532 aa3.2□□□□□ -1.9
ATXN3-220ENST00000553491 C14orf178Q8N769 122 aaPredicted RBP3.2□□□□□ -1.9
ATXN3-220ENST00000553491 SLC25A29Q8N8R3 303 aa3.2□□□□□ -1.9
ATXN3-220ENST00000553491 OR10AG1Q8NH19 301 aa3.2□□□□□ -1.9
ATXN3-220ENST00000553491 ATP6V0E2Q8NHE4 81 aa3.2□□□□□ -1.9
ATXN3-220ENST00000553491 C12orf57Q99622 126 aa3.2□□□□□ -1.9
ATXN3-220ENST00000553491 SMIM7Q9BQ49 75 aa3.2□□□□□ -1.9
ATXN3-220ENST00000553491 SAMD10Q9BYL1 202 aa3.2□□□□□ -1.9
ATXN3-220ENST00000553491 RNASE7Q9H1E1 156 aaKnown RBP3.2□□□□□ -1.9
ATXN3-220ENST00000553491 TMEM242Q9NWH2 141 aa3.2□□□□□ -1.9
ATXN3-220ENST00000553491 TRAV9-2A0A087WT02 112 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 TRAV8-6A0A0B4J262 113 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 NBDYA0A0U1RRE5 68 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 C7orf77A4D0Y5 90 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 H3BNG1 76 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 SIVA1O15304 175 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 IGLV2-8P01709 118 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 IGHV3-30P01768 117 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 IGHV3-33P01772 117 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 SRP19P09132 144 aaKnown RBP3.19□□□□□ -1.9
ATXN3-220ENST00000553491 IGHV3-30-3P0DP02 117 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 IGHV3-30-5P0DP03 117 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 GATA1P15976 413 aaPredicted RBP3.19□□□□□ -1.9
ATXN3-220ENST00000553491 RHOHQ15669 191 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 TMEM241Q24JQ0 296 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 LYZL1Q6UWQ5 148 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 FER1L6-AS1Q8NA97 138 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 ZNRF2Q8NHG8 242 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 BORCS7Q96B45 105 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 SFRP2Q96HF1 295 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 BTF3L4Q96K17 158 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 PGLYRP4Q96LB8 373 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 C18orf15Q96N68 181 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 RPS10P5Q9NQ39 176 aa3.19□□□□□ -1.9
ATXN3-220ENST00000553491 TRBV6-4A0A1B0GX49 114 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 A8MWL6 223 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 TMEM262E9PQX1 116 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 F2Z2F3 143 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 TMEM250H0YL14 139 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 K7EN84 100 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 RAB5AP20339 215 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 NTF3P20783 257 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 EVI2AP22794 236 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 AKR1D1P51857 326 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 CACNG7P62955 275 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 ADIRFQ15847 76 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 KCNIP4Q6PIL6 250 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 REG3GQ6UW15 175 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 ZFP2Q6ZN57 461 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 SMIM15Q7Z3B0 74 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 SH2D6Q7Z4S9 175 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 CBLN2Q8IUK8 224 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 DEFB104AQ8WTQ1 72 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 PTH2Q96A98 100 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 RPP21Q9H633 154 aaKnown RBP3.18□□□□□ -1.9
ATXN3-220ENST00000553491 Q9UF83 564 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 MRPS16Q9Y3D3 137 aaKnown RBP3.18□□□□□ -1.9
ATXN3-220ENST00000553491 LY96Q9Y6Y9 160 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 URGCP-MRPS24S4R325 110 aa3.18□□□□□ -1.9
ATXN3-220ENST00000553491 DNAH7Q8WXX0 4024 aa3.17□□□□□ -1.9
ATXN3-220ENST00000553491 TRBV20OR9-2A0A075B6H5 130 aa3.17□□□□□ -1.9
ATXN3-220ENST00000553491 C19orf71A6NCJ1 209 aa3.17□□□□□ -1.9
ATXN3-220ENST00000553491 PSCAO43653 123 aa3.17□□□□□ -1.9
ATXN3-220ENST00000553491 CRYGDP07320 174 aa3.17□□□□□ -1.9
ATXN3-220ENST00000553491 OR5AL1P0C617 328 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms