RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 PRELID3AQ96N28 172 aa10.06□□□□□ -0.8
MTHFD1-204ENST00000553405 HECTD4Q9Y4D8 3996 aa10.06□□□□□ -0.8
MTHFD1-204ENST00000553405 TRAV8-6A0A0B4J262 113 aa10.05□□□□□ -0.8
MTHFD1-204ENST00000553405 I3L3M4 83 aa10.05□□□□□ -0.8
MTHFD1-204ENST00000553405 ATP6V1G1O75348 118 aa10.05□□□□□ -0.8
MTHFD1-204ENST00000553405 APCSP02743 223 aa10.05□□□□□ -0.8
MTHFD1-204ENST00000553405 MT-ND6P03923 174 aa10.05□□□□□ -0.8
MTHFD1-204ENST00000553405 KIAA1644Q3SXP7 199 aa10.05□□□□□ -0.8
MTHFD1-204ENST00000553405 LAMTOR2Q9Y2Q5 125 aa10.05□□□□□ -0.8
MTHFD1-204ENST00000553405 COLCA2A8K830 154 aa10.04□□□□□ -0.8
MTHFD1-204ENST00000553405 SCO1O75880 301 aa10.04□□□□□ -0.8
MTHFD1-204ENST00000553405 ESDP10768 282 aa10.04□□□□□ -0.8
MTHFD1-204ENST00000553405 COTL1Q14019 142 aa10.04□□□□□ -0.8
MTHFD1-204ENST00000553405 CHCHD7Q9BUK0 85 aa10.04□□□□□ -0.8
MTHFD1-204ENST00000553405 SMIM2Q9BVW6 85 aa10.04□□□□□ -0.8
MTHFD1-204ENST00000553405 MRPL18Q9H0U6 180 aaKnown RBP10.04□□□□□ -0.8
MTHFD1-204ENST00000553405 IGHV1-24A0A0C4DH33 117 aa10.03□□□□□ -0.8
MTHFD1-204ENST00000553405 VCYO14598 125 aa10.03□□□□□ -0.8
MTHFD1-204ENST00000553405 ALKBH7Q9BT30 221 aaPredicted RBP10.03□□□□□ -0.8
MTHFD1-204ENST00000553405 TRBV25-1A0A075B6N4 114 aa10.02□□□□□ -0.81
MTHFD1-204ENST00000553405 M0R2N4 97 aa10.02□□□□□ -0.81
MTHFD1-204ENST00000553405 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.02□□□□□ -0.81
MTHFD1-204ENST00000553405 DNAH5Q8TE73 4624 aa10.02□□□□□ -0.81
MTHFD1-204ENST00000553405 K7EP13 123 aa10.01□□□□□ -0.81
MTHFD1-204ENST00000553405 PMCHP20382 165 aa10.01□□□□□ -0.81
MTHFD1-204ENST00000553405 MPV17L2Q567V2 206 aa10.01□□□□□ -0.81
MTHFD1-204ENST00000553405 TMEM243Q9BU79 118 aa10.01□□□□□ -0.81
MTHFD1-204ENST00000553405 EPPK1P58107 5090 aaKnown RBP10.01□□□□□ -0.81
MTHFD1-204ENST00000553405 AMTP48728 403 aa10□□□□□ -0.81
MTHFD1-204ENST00000553405 FABP9Q0Z7S8 132 aa10□□□□□ -0.81
MTHFD1-204ENST00000553405 TTC32Q5I0X7 151 aa10□□□□□ -0.81
MTHFD1-204ENST00000553405 CHCHD5Q9BSY4 110 aa10□□□□□ -0.81
MTHFD1-204ENST00000553405 IGHV3-30P01768 117 aa9.99□□□□□ -0.81
MTHFD1-204ENST00000553405 IGHV3-33P01772 117 aa9.99□□□□□ -0.81
MTHFD1-204ENST00000553405 IGHV3-30-3P0DP02 117 aa9.99□□□□□ -0.81
MTHFD1-204ENST00000553405 IGHV3-30-5P0DP03 117 aa9.99□□□□□ -0.81
MTHFD1-204ENST00000553405 S100A1P23297 94 aa9.99□□□□□ -0.81
MTHFD1-204ENST00000553405 GAGE6Q13070 117 aa9.99□□□□□ -0.81
MTHFD1-204ENST00000553405 Q6ZRN7 208 aaPredicted RBP9.99□□□□□ -0.81
MTHFD1-204ENST00000553405 TRAPPC1Q9Y5R8 145 aa9.99□□□□□ -0.81
MTHFD1-204ENST00000553405 DYNC1H1Q14204 4646 aaKnown RBP9.98□□□□□ -0.81
MTHFD1-204ENST00000553405 IBA57-AS1B1ANH7 110 aa9.98□□□□□ -0.81
MTHFD1-204ENST00000553405 RTL8CO15255 209 aa9.98□□□□□ -0.81
MTHFD1-204ENST00000553405 RBX1P62877 108 aa9.98□□□□□ -0.81
MTHFD1-204ENST00000553405 Q8N8P6 123 aa9.98□□□□□ -0.81
MTHFD1-204ENST00000553405 Q8N976 141 aa9.98□□□□□ -0.81
MTHFD1-204ENST00000553405 MAP1LC3AQ9H492 121 aa9.98□□□□□ -0.81
MTHFD1-204ENST00000553405 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.97□□□□□ -0.81
MTHFD1-204ENST00000553405 A0A1B0GUV1 79 aa9.97□□□□□ -0.81
MTHFD1-204ENST00000553405 IGKV2-29A2NJV5 120 aaPredicted RBP9.97□□□□□ -0.81
MTHFD1-204ENST00000553405 LINC01546A6NGU7 62 aa9.97□□□□□ -0.81
MTHFD1-204ENST00000553405 H7C423 109 aa9.97□□□□□ -0.81
MTHFD1-204ENST00000553405 BTF3P20290 206 aaKnown RBP9.97□□□□□ -0.81
MTHFD1-204ENST00000553405 C20orf203Q8NBC4 194 aa9.97□□□□□ -0.81
MTHFD1-204ENST00000553405 KIR2DL4Q99706 377 aa9.97□□□□□ -0.81
MTHFD1-204ENST00000553405 PKHD1P08F94 4074 aa9.96□□□□□ -0.81
MTHFD1-204ENST00000553405 IGLV4-60A0A075B6I1 120 aa9.96□□□□□ -0.82
MTHFD1-204ENST00000553405 LOC389332A0A1B0GUA5 103 aa9.96□□□□□ -0.82
MTHFD1-204ENST00000553405 TCAPO15273 167 aa9.96□□□□□ -0.82
MTHFD1-204ENST00000553405 RAB5AP20339 215 aa9.96□□□□□ -0.82
MTHFD1-204ENST00000553405 LAGE3Q14657 143 aa9.96□□□□□ -0.82
MTHFD1-204ENST00000553405 C10orf126Q8N4M7 172 aa9.96□□□□□ -0.82
MTHFD1-204ENST00000553405 FAM104AQ969W3 186 aa9.96□□□□□ -0.82
MTHFD1-204ENST00000553405 URB1-AS1Q96HZ7 61 aa9.96□□□□□ -0.82
MTHFD1-204ENST00000553405 TRAV9-2A0A087WT02 112 aa9.95□□□□□ -0.82
MTHFD1-204ENST00000553405 A0A087WX48 190 aa9.95□□□□□ -0.82
MTHFD1-204ENST00000553405 TMEM262E9PQX1 116 aa9.95□□□□□ -0.82
MTHFD1-204ENST00000553405 IFI27P40305 119 aaPredicted RBP9.95□□□□□ -0.82
MTHFD1-204ENST00000553405 PKIAP61925 76 aa9.95□□□□□ -0.82
MTHFD1-204ENST00000553405 MRPL52Q86TS9 123 aaKnown RBP9.95□□□□□ -0.82
MTHFD1-204ENST00000553405 C6orf223Q8N319 242 aa9.95□□□□□ -0.82
MTHFD1-204ENST00000553405 C18orf32Q8TCD1 76 aa9.95□□□□□ -0.82
MTHFD1-204ENST00000553405 PRR34Q9NV39 138 aa9.95□□□□□ -0.82
MTHFD1-204ENST00000553405 FGF6P10767 208 aa9.94□□□□□ -0.82
MTHFD1-204ENST00000553405 FCER1GP30273 86 aa9.94□□□□□ -0.82
MTHFD1-204ENST00000553405 ENHOQ6UWT2 76 aa9.94□□□□□ -0.82
MTHFD1-204ENST00000553405 NXT2Q9NPJ8 142 aaKnown RBP9.94□□□□□ -0.82
MTHFD1-204ENST00000553405 KLK12Q9UKR0 248 aa9.94□□□□□ -0.82
MTHFD1-204ENST00000553405 TRGC2P03986 189 aa9.93□□□□□ -0.82
MTHFD1-204ENST00000553405 RPL39P62891 51 aaKnown RBP9.93□□□□□ -0.82
MTHFD1-204ENST00000553405 C1orf134Q5TEV5 83 aa9.93□□□□□ -0.82
MTHFD1-204ENST00000553405 UBE2D4Q9Y2X8 147 aa9.93□□□□□ -0.82
MTHFD1-204ENST00000553405 K7EMI3 77 aa9.92□□□□□ -0.82
MTHFD1-204ENST00000553405 TIMM21Q9BVV7 248 aa9.92□□□□□ -0.82
MTHFD1-204ENST00000553405 UBE2L6O14933 153 aa9.91□□□□□ -0.82
MTHFD1-204ENST00000553405 ZNF25P17030 456 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-204ENST00000553405 KRTAP26-1Q6PEX3 210 aa9.91□□□□□ -0.82
MTHFD1-204ENST00000553405 CSDC2Q9Y534 153 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-204ENST00000553405 LINC00269Q8N2A0 174 aa9.9□□□□□ -0.82
MTHFD1-204ENST00000553405 CDC42SE2Q9NRR3 84 aa9.9□□□□□ -0.82
MTHFD1-204ENST00000553405 LRP1BQ9NZR2 4599 aa9.89□□□□□ -0.83
MTHFD1-204ENST00000553405 A0A096LNJ9 63 aa9.89□□□□□ -0.83
MTHFD1-204ENST00000553405 ANGP03950 147 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-204ENST00000553405 ORMDL2Q53FV1 153 aa9.89□□□□□ -0.83
MTHFD1-204ENST00000553405 UBE2WQ96B02 151 aa9.89□□□□□ -0.83
MTHFD1-204ENST00000553405 TRAV8-3A0A0A6YYJ7 113 aa9.88□□□□□ -0.83
MTHFD1-204ENST00000553405 LINC00310P59036 64 aa9.88□□□□□ -0.83
MTHFD1-204ENST00000553405 REG3AQ06141 175 aa9.88□□□□□ -0.83
MTHFD1-204ENST00000553405 RNASEKQ6P5S7 137 aaKnown RBP9.88□□□□□ -0.83
MTHFD1-204ENST00000553405 MAPKAPK5-AS1Q8N8E1 139 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms