RNA–Protein interactions for RNA: ENST00000552412.1

CCDC59-206, Transcript of coiled-coil domain containing 59, humanhuman

TSL 3

Gene CCDC59, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-206ENST00000552412 RPL39P62891 51 aaKnown RBP4.94□□□□□ -1.62
CCDC59-206ENST00000552412 SMAGPQ0VAQ4 97 aa4.94□□□□□ -1.62
CCDC59-206ENST00000552412 ZNF124Q15973 351 aa4.94□□□□□ -1.62
CCDC59-206ENST00000552412 NEGR1Q7Z3B1 354 aa4.94□□□□□ -1.62
CCDC59-206ENST00000552412 C1orf158Q8N1D5 194 aa4.94□□□□□ -1.62
CCDC59-206ENST00000552412 C16orf74Q96GX8 76 aa4.94□□□□□ -1.62
CCDC59-206ENST00000552412 TIMM21Q9BVV7 248 aa4.94□□□□□ -1.62
CCDC59-206ENST00000552412 C19orf73Q9NVV2 129 aa4.94□□□□□ -1.62
CCDC59-206ENST00000552412 IGLV4-3A0A075B6K6 122 aa4.93□□□□□ -1.62
CCDC59-206ENST00000552412 TRAV8-6A0A0B4J262 113 aa4.93□□□□□ -1.62
CCDC59-206ENST00000552412 C9orf118A6NHY6 69 aa4.93□□□□□ -1.62
CCDC59-206ENST00000552412 LY6G6DO95868 133 aa4.93□□□□□ -1.62
CCDC59-206ENST00000552412 P0DMU3 169 aa4.93□□□□□ -1.62
CCDC59-206ENST00000552412 FAM231AP0DMU4 169 aa4.93□□□□□ -1.62
CCDC59-206ENST00000552412 FAM231CP0DMU5 169 aa4.93□□□□□ -1.62
CCDC59-206ENST00000552412 HTN1P15515 57 aa4.93□□□□□ -1.62
CCDC59-206ENST00000552412 PTTG1IPP53801 180 aa4.93□□□□□ -1.62
CCDC59-206ENST00000552412 COTL1Q14019 142 aa4.93□□□□□ -1.62
CCDC59-206ENST00000552412 VAMP3Q15836 100 aa4.93□□□□□ -1.62
CCDC59-206ENST00000552412 CEND1Q8N111 149 aa4.93□□□□□ -1.62
CCDC59-206ENST00000552412 C11orf44Q8N8P7 122 aa4.93□□□□□ -1.62
CCDC59-206ENST00000552412 AMELXQ99217 191 aa4.93□□□□□ -1.62
CCDC59-206ENST00000552412 PRADC1Q9BSG0 188 aa4.93□□□□□ -1.62
CCDC59-206ENST00000552412 XCL2Q9UBD3 114 aa4.93□□□□□ -1.62
CCDC59-206ENST00000552412 FASNP49327 2511 aaKnown RBP4.93□□□□□ -1.62
CCDC59-206ENST00000552412 PF4P02776 101 aa4.92□□□□□ -1.62
CCDC59-206ENST00000552412 SMIM13P0DJ93 91 aa4.92□□□□□ -1.62
CCDC59-206ENST00000552412 AZU1P20160 251 aa4.92□□□□□ -1.62
CCDC59-206ENST00000552412 MRPS36P82909 103 aaKnown RBP4.92□□□□□ -1.62
CCDC59-206ENST00000552412 GTF2H5Q6ZYL4 71 aa4.92□□□□□ -1.62
CCDC59-206ENST00000552412 DAZ4Q86SG3 579 aaKnown RBP4.92□□□□□ -1.62
CCDC59-206ENST00000552412 LINC00482Q8N8I6 264 aa4.92□□□□□ -1.62
CCDC59-206ENST00000552412 OR4C5Q8NGB2 326 aa4.92□□□□□ -1.62
CCDC59-206ENST00000552412 VCX2Q9H322 139 aa4.92□□□□□ -1.62
CCDC59-206ENST00000552412 DAZ3Q9NR90 486 aaKnown RBP4.92□□□□□ -1.62
CCDC59-206ENST00000552412 MRPL16Q9NX20 251 aaKnown RBP4.92□□□□□ -1.62
CCDC59-206ENST00000552412 NF1P21359 2839 aa4.91□□□□□ -1.62
CCDC59-206ENST00000552412 TRBV7-3A0A075B6L6 115 aa4.91□□□□□ -1.62
CCDC59-206ENST00000552412 A0A1B0GWB2 263 aa4.91□□□□□ -1.62
CCDC59-206ENST00000552412 ZNF815PA8K554 130 aa4.91□□□□□ -1.62
CCDC59-206ENST00000552412 K7EQD1 137 aa4.91□□□□□ -1.62
CCDC59-206ENST00000552412 GIG44P09565 113 aaPredicted RBP4.91□□□□□ -1.62
CCDC59-206ENST00000552412 GCSHP23434 173 aa4.91□□□□□ -1.62
CCDC59-206ENST00000552412 RPL36AP83881 106 aaKnown RBP4.91□□□□□ -1.62
CCDC59-206ENST00000552412 MAPKAPK5-AS1Q8N8E1 139 aa4.91□□□□□ -1.62
CCDC59-206ENST00000552412 ZNRF2Q8NHG8 242 aa4.91□□□□□ -1.62
CCDC59-206ENST00000552412 RPL36ALQ969Q0 106 aaKnown RBP4.91□□□□□ -1.62
CCDC59-206ENST00000552412 PLEKHB2Q96CS7 222 aa4.91□□□□□ -1.62
CCDC59-206ENST00000552412 HIST1H4GQ99525 98 aa4.91□□□□□ -1.62
CCDC59-206ENST00000552412 OVOL2Q9BRP0 275 aa4.91□□□□□ -1.62
CCDC59-206ENST00000552412 CHCHD7Q9BUK0 85 aa4.91□□□□□ -1.62
CCDC59-206ENST00000552412 SPANXB1Q9NS25 103 aaPredicted RBP4.91□□□□□ -1.62
CCDC59-206ENST00000552412 CSDC2Q9Y534 153 aaKnown RBP4.91□□□□□ -1.62
CCDC59-206ENST00000552412 TRGV1A0A0A0MS02 117 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 IGHV3-73A0A0B4J1V6 119 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 TINCRA0A1B0GVN0 87 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 TMEM223A0PJW6 202 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 H7C423 109 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 LEPROTO15243 131 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 CCL25O15444 150 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 ZNF22P17026 224 aaPredicted RBP4.9□□□□□ -1.63
CCDC59-206ENST00000552412 FXYD2P54710 66 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 TCTAP57738 103 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 RRN3P1Q2M238 152 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 TMEM170BQ5T4T1 132 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 C9orf66Q5T8R8 295 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 SCGB1D4Q6XE38 83 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 CSNK1G2-AS1Q8NCQ2 148 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 OR5A1Q8NGJ0 315 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 TTTY13Q9BZ97 58 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 GTSF1LQ9H1H1 148 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 UBE2D4Q9Y2X8 147 aa4.9□□□□□ -1.63
CCDC59-206ENST00000552412 SETD2Q9BYW2 2564 aaPredicted RBP4.9□□□□□ -1.63
CCDC59-206ENST00000552412 TRBV6-4A0A1B0GX49 114 aa4.89□□□□□ -1.63
CCDC59-206ENST00000552412 A0A1W2PPM0 123 aa4.89□□□□□ -1.63
CCDC59-206ENST00000552412 PLAC8L1A1L4L8 177 aa4.89□□□□□ -1.63
CCDC59-206ENST00000552412 GAGE10A6NGK3 116 aa4.89□□□□□ -1.63
CCDC59-206ENST00000552412 SMIM9A6NGZ8 99 aa4.89□□□□□ -1.63
CCDC59-206ENST00000552412 J3QQQ9 107 aa4.89□□□□□ -1.63
CCDC59-206ENST00000552412 K7EP13 123 aa4.89□□□□□ -1.63
CCDC59-206ENST00000552412 FABP2P12104 132 aa4.89□□□□□ -1.63
CCDC59-206ENST00000552412 LGALS3P17931 250 aaKnown RBP4.89□□□□□ -1.63
CCDC59-206ENST00000552412 AMMECR1LQ6DCA0 310 aa4.89□□□□□ -1.63
CCDC59-206ENST00000552412 Q6ZSN1 163 aa4.89□□□□□ -1.63
CCDC59-206ENST00000552412 FAM19A3Q7Z5A8 133 aa4.89□□□□□ -1.63
CCDC59-206ENST00000552412 PHLDA1Q8WV24 401 aaPredicted RBP4.89□□□□□ -1.63
CCDC59-206ENST00000552412 SETXQ7Z333 2677 aaKnown RBP4.88□□□□□ -1.63
CCDC59-206ENST00000552412 GCN1Q92616 2671 aaKnown RBP4.88□□□□□ -1.63
CCDC59-206ENST00000552412 NSD1Q96L73 2696 aaPredicted RBP4.88□□□□□ -1.63
CCDC59-206ENST00000552412 IGHV3OR16-12A0A075B7B8 117 aa4.88□□□□□ -1.63
CCDC59-206ENST00000552412 IGLV5-45A0A087WSX0 123 aa4.88□□□□□ -1.63
CCDC59-206ENST00000552412 A0A0J9YY99 117 aa4.88□□□□□ -1.63
CCDC59-206ENST00000552412 K7EP34 96 aa4.88□□□□□ -1.63
CCDC59-206ENST00000552412 TIRAPP58753 221 aa4.88□□□□□ -1.63
CCDC59-206ENST00000552412 KRTAP10-3P60369 221 aa4.88□□□□□ -1.63
CCDC59-206ENST00000552412 UBE2D3P61077 147 aa4.88□□□□□ -1.63
CCDC59-206ENST00000552412 UBE2D2P62837 147 aa4.88□□□□□ -1.63
CCDC59-206ENST00000552412 HIST2H2BDQ6DRA6 164 aa4.88□□□□□ -1.63
CCDC59-206ENST00000552412 Q6ZTI0 123 aa4.88□□□□□ -1.63
CCDC59-206ENST00000552412 SLC25A29Q8N8R3 303 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms