RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 SFT2D1Q8WV19 159 aa13.45□□□□□ -0.26
SMARCD1-212ENST00000551966 NIT2Q9NQR4 276 aa13.45□□□□□ -0.26
SMARCD1-212ENST00000551966 IGKV3OR2-268A0A0C4DH90 116 aa13.44□□□□□ -0.26
SMARCD1-212ENST00000551966 A0A1B0GV50 99 aa13.44□□□□□ -0.26
SMARCD1-212ENST00000551966 TPPP3Q9BW30 176 aa13.44□□□□□ -0.26
SMARCD1-212ENST00000551966 UBE2L6O14933 153 aa13.43□□□□□ -0.26
SMARCD1-212ENST00000551966 REG3GQ6UW15 175 aa13.43□□□□□ -0.26
SMARCD1-212ENST00000551966 FER1L6-AS1Q8NA97 138 aa13.43□□□□□ -0.26
SMARCD1-212ENST00000551966 GVQW2A0A096LPI5 108 aaPredicted RBP13.42□□□□□ -0.26
SMARCD1-212ENST00000551966 AMTP48728 403 aa13.42□□□□□ -0.26
SMARCD1-212ENST00000551966 CHCHD10Q8WYQ3 142 aaPredicted RBP13.42□□□□□ -0.26
SMARCD1-212ENST00000551966 RPL35P42766 123 aaKnown RBP13.41□□□□□ -0.26
SMARCD1-212ENST00000551966 CACNG7P62955 275 aa13.41□□□□□ -0.26
SMARCD1-212ENST00000551966 ARPC5O15511 151 aa13.4□□□□□ -0.26
SMARCD1-212ENST00000551966 PFDN1O60925 122 aa13.4□□□□□ -0.26
SMARCD1-212ENST00000551966 COTL1Q14019 142 aa13.4□□□□□ -0.26
SMARCD1-212ENST00000551966 LPAP08519 4548 aa13.39□□□□□ -0.27
SMARCD1-212ENST00000551966 OR2D3Q8NGH3 330 aa13.39□□□□□ -0.27
SMARCD1-212ENST00000551966 FAM213BQ8TBF2 198 aa13.39□□□□□ -0.27
SMARCD1-212ENST00000551966 C19orf71A6NCJ1 209 aa13.38□□□□□ -0.27
SMARCD1-212ENST00000551966 KCNRGQ8N5I3 272 aa13.38□□□□□ -0.27
SMARCD1-212ENST00000551966 NTF3P20783 257 aa13.37□□□□□ -0.27
SMARCD1-212ENST00000551966 RPS20P60866 119 aaKnown RBP13.37□□□□□ -0.27
SMARCD1-212ENST00000551966 FOXI1Q12951 378 aa13.37□□□□□ -0.27
SMARCD1-212ENST00000551966 LYZL1Q6UWQ5 148 aa13.37□□□□□ -0.27
SMARCD1-212ENST00000551966 Q6ZRP5 223 aa13.36□□□□□ -0.27
SMARCD1-212ENST00000551966 F2Z2F3 143 aa13.35□□□□□ -0.27
SMARCD1-212ENST00000551966 TRGC1P0CF51 173 aa13.35□□□□□ -0.27
SMARCD1-212ENST00000551966 LINC00526Q96FQ7 95 aa13.35□□□□□ -0.27
SMARCD1-212ENST00000551966 LINC00474Q9P2X8 69 aa13.35□□□□□ -0.27
SMARCD1-212ENST00000551966 CCL20P78556 96 aa13.34□□□□□ -0.27
SMARCD1-212ENST00000551966 CENPWQ5EE01 88 aa13.34□□□□□ -0.27
SMARCD1-212ENST00000551966 Q6ZNX1 250 aa13.34□□□□□ -0.27
SMARCD1-212ENST00000551966 GATD1Q8NB37 220 aa13.34□□□□□ -0.27
SMARCD1-212ENST00000551966 C11orf52Q96A22 123 aa13.34□□□□□ -0.27
SMARCD1-212ENST00000551966 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.33□□□□□ -0.28
SMARCD1-212ENST00000551966 IGKV2-29A2NJV5 120 aaPredicted RBP13.33□□□□□ -0.28
SMARCD1-212ENST00000551966 H2AFB1P0C5Y9 115 aa13.33□□□□□ -0.28
SMARCD1-212ENST00000551966 TRAV26-2A0A0B4J265 109 aa13.32□□□□□ -0.28
SMARCD1-212ENST00000551966 RAB19A4D1S5 217 aa13.32□□□□□ -0.28
SMARCD1-212ENST00000551966 UMAD1C9J7I0 102 aa13.32□□□□□ -0.28
SMARCD1-212ENST00000551966 AMMECR1LQ6DCA0 310 aa13.32□□□□□ -0.28
SMARCD1-212ENST00000551966 RNASEKQ6P5S7 137 aaKnown RBP13.32□□□□□ -0.28
SMARCD1-212ENST00000551966 SMLR1H3BR10 107 aa13.31□□□□□ -0.28
SMARCD1-212ENST00000551966 C9orf62Q8N4C0 152 aa13.31□□□□□ -0.28
SMARCD1-212ENST00000551966 IFNA1P01562 189 aa13.3□□□□□ -0.28
SMARCD1-212ENST00000551966 FGF6P10767 208 aa13.3□□□□□ -0.28
SMARCD1-212ENST00000551966 RPL39LQ96EH5 51 aaKnown RBP13.3□□□□□ -0.28
SMARCD1-212ENST00000551966 H7C423 109 aa13.29□□□□□ -0.28
SMARCD1-212ENST00000551966 XCL1P47992 114 aa13.29□□□□□ -0.28
SMARCD1-212ENST00000551966 CARD19Q96LW7 228 aa13.29□□□□□ -0.28
SMARCD1-212ENST00000551966 XKRY2A2RUG3 117 aa13.28□□□□□ -0.28
SMARCD1-212ENST00000551966 OR5A1Q8NGJ0 315 aa13.28□□□□□ -0.28
SMARCD1-212ENST00000551966 IGHV1-58A0A0C4DH39 117 aa13.27□□□□□ -0.29
SMARCD1-212ENST00000551966 LINC00959A0A1B0GUT2 108 aa13.27□□□□□ -0.29
SMARCD1-212ENST00000551966 CCL25O15444 150 aa13.27□□□□□ -0.29
SMARCD1-212ENST00000551966 NCR2O95944 276 aa13.27□□□□□ -0.29
SMARCD1-212ENST00000551966 TWIST1Q15672 202 aa13.27□□□□□ -0.29
SMARCD1-212ENST00000551966 GNG13Q9P2W3 67 aa13.27□□□□□ -0.29
SMARCD1-212ENST00000551966 TRBV20OR9-2A0A075B6H5 130 aa13.26□□□□□ -0.29
SMARCD1-212ENST00000551966 A0A1W2PNN7 141 aa13.26□□□□□ -0.29
SMARCD1-212ENST00000551966 FAM231BA6NCW3 169 aa13.26□□□□□ -0.29
SMARCD1-212ENST00000551966 CTRLP40313 264 aa13.26□□□□□ -0.29
SMARCD1-212ENST00000551966 CNFNQ9BYD5 112 aa13.26□□□□□ -0.29
SMARCD1-212ENST00000551966 PKIGQ9Y2B9 76 aa13.26□□□□□ -0.29
SMARCD1-212ENST00000551966 GNG4P50150 75 aa13.25□□□□□ -0.29
SMARCD1-212ENST00000551966 PTTG1IPP53801 180 aa13.25□□□□□ -0.29
SMARCD1-212ENST00000551966 FOXA3P55318 350 aaPredicted RBP13.25□□□□□ -0.29
SMARCD1-212ENST00000551966 SYCNQ0VAF6 134 aa13.25□□□□□ -0.29
SMARCD1-212ENST00000551966 NUDT10Q8NFP7 164 aa13.25□□□□□ -0.29
SMARCD1-212ENST00000551966 SMIM12Q96EX1 92 aa13.25□□□□□ -0.29
SMARCD1-212ENST00000551966 NUDT11Q96G61 164 aa13.25□□□□□ -0.29
SMARCD1-212ENST00000551966 MANBALQ9NQG1 85 aa13.25□□□□□ -0.29
SMARCD1-212ENST00000551966 APCSP02743 223 aa13.24□□□□□ -0.29
SMARCD1-212ENST00000551966 ZNF345Q14585 488 aa13.24□□□□□ -0.29
SMARCD1-212ENST00000551966 GAGE2BQ13066 116 aa13.23□□□□□ -0.29
SMARCD1-212ENST00000551966 SDHAF1A6NFY7 115 aa13.22□□□□□ -0.29
SMARCD1-212ENST00000551966 ZNF25P17030 456 aaPredicted RBP13.22□□□□□ -0.29
SMARCD1-212ENST00000551966 PSORS1C2Q9UIG4 136 aa13.22□□□□□ -0.29
SMARCD1-212ENST00000551966 TRAV1-1A0A0B4J248 108 aa13.21□□□□□ -0.29
SMARCD1-212ENST00000551966 ZNF561-AS1K7EIQ3 104 aa13.21□□□□□ -0.29
SMARCD1-212ENST00000551966 ESDP10768 282 aa13.2□□□□□ -0.3
SMARCD1-212ENST00000551966 LOC107984640A0A0U1RRK4 108 aa13.19□□□□□ -0.3
SMARCD1-212ENST00000551966 BCL2L11O43521 198 aa13.19□□□□□ -0.3
SMARCD1-212ENST00000551966 CD164L2Q6UWJ8 174 aa13.19□□□□□ -0.3
SMARCD1-212ENST00000551966 TMEM101Q96IK0 257 aa13.19□□□□□ -0.3
SMARCD1-212ENST00000551966 BTF3L4Q96K17 158 aa13.19□□□□□ -0.3
SMARCD1-212ENST00000551966 IGLV4-69A0A075B6H9 119 aa13.18□□□□□ -0.3
SMARCD1-212ENST00000551966 I3L3M4 83 aa13.18□□□□□ -0.3
SMARCD1-212ENST00000551966 BCL2P10415 239 aa13.18□□□□□ -0.3
SMARCD1-212ENST00000551966 PMCHP20382 165 aa13.18□□□□□ -0.3
SMARCD1-212ENST00000551966 CAMPP49913 170 aa13.18□□□□□ -0.3
SMARCD1-212ENST00000551966 SS18Q15532 418 aa13.18□□□□□ -0.3
SMARCD1-212ENST00000551966 ZNF664Q8N3J9 261 aa13.18□□□□□ -0.3
SMARCD1-212ENST00000551966 PRR26Q8N8Z3 221 aa13.18□□□□□ -0.3
SMARCD1-212ENST00000551966 BIN3Q9NQY0 253 aa13.18□□□□□ -0.3
SMARCD1-212ENST00000551966 CDC42SE2Q9NRR3 84 aa13.18□□□□□ -0.3
SMARCD1-212ENST00000551966 MED9Q9NWA0 146 aa13.18□□□□□ -0.3
SMARCD1-212ENST00000551966 HMSDA8MTL9 139 aa13.17□□□□□ -0.3
SMARCD1-212ENST00000551966 TSHBP01222 138 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms