RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 LOC100131303A0A0U1RQF7 123 aa7.26□□□□□ -1.25
NEK3-203ENST00000551355 NUDT3O95989 172 aa7.26□□□□□ -1.25
NEK3-203ENST00000551355 TSHBP01222 138 aa7.26□□□□□ -1.25
NEK3-203ENST00000551355 S100A2P29034 98 aa7.26□□□□□ -1.25
NEK3-203ENST00000551355 TIRAPP58753 221 aa7.26□□□□□ -1.25
NEK3-203ENST00000551355 URB1-AS1Q96HZ7 61 aa7.26□□□□□ -1.25
NEK3-203ENST00000551355 Q9UF83 564 aa7.26□□□□□ -1.25
NEK3-203ENST00000551355 NUPR2A6NF83 97 aa7.25□□□□□ -1.25
NEK3-203ENST00000551355 H7C423 109 aa7.25□□□□□ -1.25
NEK3-203ENST00000551355 HBDP02042 147 aa7.25□□□□□ -1.25
NEK3-203ENST00000551355 TCTAP57738 103 aa7.25□□□□□ -1.25
NEK3-203ENST00000551355 SNRPEP62304 92 aaKnown RBP7.25□□□□□ -1.25
NEK3-203ENST00000551355 TRBV25-1A0A075B6N4 114 aa7.24□□□□□ -1.25
NEK3-203ENST00000551355 A0A096LPF7 62 aa7.24□□□□□ -1.25
NEK3-203ENST00000551355 TRBV6-8A0A0A6YYG3 113 aa7.24□□□□□ -1.25
NEK3-203ENST00000551355 IGHV1-24A0A0C4DH33 117 aa7.24□□□□□ -1.25
NEK3-203ENST00000551355 AMTP48728 403 aa7.24□□□□□ -1.25
NEK3-203ENST00000551355 LINC00310P59036 64 aa7.24□□□□□ -1.25
NEK3-203ENST00000551355 PKIAP61925 76 aa7.24□□□□□ -1.25
NEK3-203ENST00000551355 HSPB8Q9UJY1 196 aa7.24□□□□□ -1.25
NEK3-203ENST00000551355 CYSLTR1Q9Y271 337 aa7.24□□□□□ -1.25
NEK3-203ENST00000551355 KLK5Q9Y337 293 aaPredicted RBP7.24□□□□□ -1.25
NEK3-203ENST00000551355 NACAE9PAV3 2078 aa7.23□□□□□ -1.25
NEK3-203ENST00000551355 IGHV3-38A0A0C4DH36 116 aa7.23□□□□□ -1.25
NEK3-203ENST00000551355 NUPR1O60356 82 aa7.23□□□□□ -1.25
NEK3-203ENST00000551355 NPSP0C0P6 89 aa7.23□□□□□ -1.25
NEK3-203ENST00000551355 BTF3P20290 206 aaKnown RBP7.23□□□□□ -1.25
NEK3-203ENST00000551355 CEMP1Q6PRD7 247 aaPredicted RBP7.23□□□□□ -1.25
NEK3-203ENST00000551355 HIST3H2BBQ8N257 126 aa7.23□□□□□ -1.25
NEK3-203ENST00000551355 C20orf203Q8NBC4 194 aa7.23□□□□□ -1.25
NEK3-203ENST00000551355 TOMM6Q96B49 74 aa7.23□□□□□ -1.25
NEK3-203ENST00000551355 TMEM243Q9BU79 118 aa7.23□□□□□ -1.25
NEK3-203ENST00000551355 IGLL5B9A064 214 aa7.22□□□□□ -1.25
NEK3-203ENST00000551355 UBE2L6O14933 153 aa7.22□□□□□ -1.25
NEK3-203ENST00000551355 ATP5LO75964 103 aa7.22□□□□□ -1.25
NEK3-203ENST00000551355 LEPROTL1O95214 131 aa7.22□□□□□ -1.25
NEK3-203ENST00000551355 C2orf66Q6UXQ4 117 aa7.22□□□□□ -1.25
NEK3-203ENST00000551355 TENM3Q9P273 2699 aa7.22□□□□□ -1.25
NEK3-203ENST00000551355 PAPPA-AS1Q5QFB9 102 aa7.21□□□□□ -1.26
NEK3-203ENST00000551355 LELP1Q5T871 98 aa7.21□□□□□ -1.26
NEK3-203ENST00000551355 LYPD5Q6UWN5 251 aa7.21□□□□□ -1.26
NEK3-203ENST00000551355 NTM-AS1Q6ZSK4 140 aa7.21□□□□□ -1.26
NEK3-203ENST00000551355 FAM19A2Q8N3H0 131 aa7.21□□□□□ -1.26
NEK3-203ENST00000551355 TMEM141Q96I45 108 aa7.21□□□□□ -1.26
NEK3-203ENST00000551355 CHCHD7Q9BUK0 85 aa7.21□□□□□ -1.26
NEK3-203ENST00000551355 TIMM21Q9BVV7 248 aa7.21□□□□□ -1.26
NEK3-203ENST00000551355 SPANXA1Q9NS26 97 aa7.21□□□□□ -1.26
NEK3-203ENST00000551355 PYGO1Q9Y3Y4 419 aa7.21□□□□□ -1.26
NEK3-203ENST00000551355 HUWE1Q7Z6Z7 4374 aaKnown RBP7.21□□□□□ -1.26
NEK3-203ENST00000551355 TRAV8-6A0A0B4J262 113 aa7.2□□□□□ -1.26
NEK3-203ENST00000551355 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.2□□□□□ -1.26
NEK3-203ENST00000551355 J3QL48 77 aa7.2□□□□□ -1.26
NEK3-203ENST00000551355 ZNF25P17030 456 aaPredicted RBP7.2□□□□□ -1.26
NEK3-203ENST00000551355 CCL18P55774 89 aa7.2□□□□□ -1.26
NEK3-203ENST00000551355 PDZD11Q5EBL8 140 aa7.2□□□□□ -1.26
NEK3-203ENST00000551355 ERASQ7Z444 233 aa7.2□□□□□ -1.26
NEK3-203ENST00000551355 WWC2-AS2Q96NR7 200 aa7.2□□□□□ -1.26
NEK3-203ENST00000551355 SCGB3A1Q96QR1 104 aa7.2□□□□□ -1.26
NEK3-203ENST00000551355 TIMM17AQ99595 171 aa7.2□□□□□ -1.26
NEK3-203ENST00000551355 HIST1H2BLQ99880 126 aa7.2□□□□□ -1.26
NEK3-203ENST00000551355 CSDC2Q9Y534 153 aaKnown RBP7.2□□□□□ -1.26
NEK3-203ENST00000551355 DNAH9Q9NYC9 4486 aa7.19□□□□□ -1.26
NEK3-203ENST00000551355 A0A096LNJ9 63 aa7.19□□□□□ -1.26
NEK3-203ENST00000551355 FABP4P15090 132 aa7.19□□□□□ -1.26
NEK3-203ENST00000551355 PMCHL1Q16048 86 aa7.19□□□□□ -1.26
NEK3-203ENST00000551355 MRPL52Q86TS9 123 aaKnown RBP7.19□□□□□ -1.26
NEK3-203ENST00000551355 TMEM101Q96IK0 257 aa7.19□□□□□ -1.26
NEK3-203ENST00000551355 CHCHD5Q9BSY4 110 aa7.19□□□□□ -1.26
NEK3-203ENST00000551355 FBN3Q75N90 2809 aa7.19□□□□□ -1.26
NEK3-203ENST00000551355 IGIPA6NJ69 53 aa7.18□□□□□ -1.26
NEK3-203ENST00000551355 AMMECR1LQ6DCA0 310 aa7.18□□□□□ -1.26
NEK3-203ENST00000551355 DGAT2L7PQ6IED9 249 aa7.18□□□□□ -1.26
NEK3-203ENST00000551355 Q6ZN92 141 aa7.18□□□□□ -1.26
NEK3-203ENST00000551355 MUC7Q8TAX7 377 aa7.18□□□□□ -1.26
NEK3-203ENST00000551355 IFI27L1Q96BM0 104 aa7.18□□□□□ -1.26
NEK3-203ENST00000551355 MAP1LC3CQ9BXW4 147 aa7.18□□□□□ -1.26
NEK3-203ENST00000551355 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.17□□□□□ -1.26
NEK3-203ENST00000551355 A0A1B0GUV1 79 aa7.17□□□□□ -1.26
NEK3-203ENST00000551355 IGKV2-29A2NJV5 120 aaPredicted RBP7.17□□□□□ -1.26
NEK3-203ENST00000551355 FGF6P10767 208 aa7.17□□□□□ -1.26
NEK3-203ENST00000551355 AKR1D1P51857 326 aa7.17□□□□□ -1.26
NEK3-203ENST00000551355 RPL39P62891 51 aaKnown RBP7.17□□□□□ -1.26
NEK3-203ENST00000551355 MRPS36P82909 103 aaKnown RBP7.17□□□□□ -1.26
NEK3-203ENST00000551355 ESRGQ1W209 222 aa7.17□□□□□ -1.26
NEK3-203ENST00000551355 DEFB104AQ8WTQ1 72 aa7.17□□□□□ -1.26
NEK3-203ENST00000551355 UBE2D4Q9Y2X8 147 aa7.17□□□□□ -1.26
NEK3-203ENST00000551355 STAB2Q8WWQ8 2551 aa7.16□□□□□ -1.26
NEK3-203ENST00000551355 COL7A1Q02388 2944 aa7.16□□□□□ -1.26
NEK3-203ENST00000551355 A0A087WX48 190 aa7.16□□□□□ -1.26
NEK3-203ENST00000551355 IFITM10A6NMD0 228 aa7.16□□□□□ -1.26
NEK3-203ENST00000551355 TMEM262E9PQX1 116 aa7.16□□□□□ -1.26
NEK3-203ENST00000551355 EREGO14944 169 aa7.16□□□□□ -1.26
NEK3-203ENST00000551355 SPATA12Q7Z6I5 190 aa7.16□□□□□ -1.26
NEK3-203ENST00000551355 OR5A1Q8NGJ0 315 aa7.16□□□□□ -1.26
NEK3-203ENST00000551355 APLNQ9ULZ1 77 aa7.16□□□□□ -1.26
NEK3-203ENST00000551355 MRPS16Q9Y3D3 137 aaKnown RBP7.16□□□□□ -1.26
NEK3-203ENST00000551355 PRKDCP78527 4128 aaKnown RBP7.16□□□□□ -1.26
NEK3-203ENST00000551355 PRSS1P07477 247 aa7.15□□□□□ -1.26
NEK3-203ENST00000551355 GAGE6Q13070 117 aa7.15□□□□□ -1.26
NEK3-203ENST00000551355 PET117Q6UWS5 81 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms