RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 ALKBH7Q9BT30 221 aaPredicted RBP8.05□□□□□ -1.12
PRPF40B-213ENST00000551269 TMEM243Q9BU79 118 aa8.05□□□□□ -1.12
PRPF40B-213ENST00000551269 LCE6AA0A183 80 aa8.04□□□□□ -1.12
PRPF40B-213ENST00000551269 SIVA1O15304 175 aa8.04□□□□□ -1.12
PRPF40B-213ENST00000551269 IQCJQ1A5X6 159 aa8.04□□□□□ -1.12
PRPF40B-213ENST00000551269 NXT2Q9NPJ8 142 aaKnown RBP8.04□□□□□ -1.12
PRPF40B-213ENST00000551269 A0A087WX48 190 aa8.03□□□□□ -1.12
PRPF40B-213ENST00000551269 TSHBP01222 138 aa8.03□□□□□ -1.12
PRPF40B-213ENST00000551269 TRGC2P03986 189 aa8.03□□□□□ -1.12
PRPF40B-213ENST00000551269 TTC32Q5I0X7 151 aa8.03□□□□□ -1.12
PRPF40B-213ENST00000551269 NTM-AS1Q6ZSK4 140 aa8.03□□□□□ -1.12
PRPF40B-213ENST00000551269 Q8N8P6 123 aa8.03□□□□□ -1.12
PRPF40B-213ENST00000551269 PRSS3P2Q8NHM4 247 aa8.03□□□□□ -1.12
PRPF40B-213ENST00000551269 IGLV2-18A0A075B6J9 118 aa8.02□□□□□ -1.13
PRPF40B-213ENST00000551269 TMEM262E9PQX1 116 aa8.02□□□□□ -1.13
PRPF40B-213ENST00000551269 SMAGPQ0VAQ4 97 aa8.02□□□□□ -1.13
PRPF40B-213ENST00000551269 FA2HQ7L5A8 372 aa8.02□□□□□ -1.13
PRPF40B-213ENST00000551269 TMEM18Q96B42 140 aa8.02□□□□□ -1.13
PRPF40B-213ENST00000551269 Q9H8V8 135 aa8.02□□□□□ -1.13
PRPF40B-213ENST00000551269 DNAH6Q9C0G6 4158 aa8.02□□□□□ -1.13
PRPF40B-213ENST00000551269 DNAH1Q9P2D7 4330 aa8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 TRAV9-2A0A087WT02 112 aa8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 IGKV2-29A2NJV5 120 aaPredicted RBP8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 PRSS47A8MTI9 375 aa8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 K7EMI3 77 aa8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 IGHV3-30P01768 117 aa8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 IGHV3-33P01772 117 aa8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 DNAH10OSP0CZ25 163 aa8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 IGHV3-30-3P0DP02 117 aa8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 IGHV3-30-5P0DP03 117 aa8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 IFI27P40305 119 aaPredicted RBP8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 GAGE6Q13070 117 aa8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 ORMDL2Q53FV1 153 aa8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 LINC01556Q5JQF7 62 aa8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 AMMECR1LQ6DCA0 310 aa8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 NIT1Q86X76 327 aa8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 C18orf32Q8TCD1 76 aa8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 CHCHD7Q9BUK0 85 aa8.01□□□□□ -1.13
PRPF40B-213ENST00000551269 H7C423 109 aa8□□□□□ -1.13
PRPF40B-213ENST00000551269 RAB5BP61020 215 aa8□□□□□ -1.13
PRPF40B-213ENST00000551269 RNASEKQ6P5S7 137 aaKnown RBP8□□□□□ -1.13
PRPF40B-213ENST00000551269 C10orf126Q8N4M7 172 aa8□□□□□ -1.13
PRPF40B-213ENST00000551269 VPS13DQ5THJ4 4388 aa8□□□□□ -1.13
PRPF40B-213ENST00000551269 LAGE3Q14657 143 aa7.99□□□□□ -1.13
PRPF40B-213ENST00000551269 MPV17L2Q567V2 206 aa7.99□□□□□ -1.13
PRPF40B-213ENST00000551269 TMEM101Q96IK0 257 aa7.99□□□□□ -1.13
PRPF40B-213ENST00000551269 NBDYA0A0U1RRE5 68 aa7.98□□□□□ -1.13
PRPF40B-213ENST00000551269 K7EP13 123 aa7.98□□□□□ -1.13
PRPF40B-213ENST00000551269 CRPP02741 224 aa7.98□□□□□ -1.13
PRPF40B-213ENST00000551269 ANGP03950 147 aaKnown RBP7.98□□□□□ -1.13
PRPF40B-213ENST00000551269 ESDP10768 282 aa7.98□□□□□ -1.13
PRPF40B-213ENST00000551269 ZNF25P17030 456 aaPredicted RBP7.98□□□□□ -1.13
PRPF40B-213ENST00000551269 BTF3P20290 206 aaKnown RBP7.98□□□□□ -1.13
PRPF40B-213ENST00000551269 G0S2P27469 103 aa7.98□□□□□ -1.13
PRPF40B-213ENST00000551269 BAGE3Q86Y29 109 aa7.98□□□□□ -1.13
PRPF40B-213ENST00000551269 AP5S1Q9NUS5 200 aa7.98□□□□□ -1.13
PRPF40B-213ENST00000551269 M0R2N4 97 aa7.97□□□□□ -1.13
PRPF40B-213ENST00000551269 FGF6P10767 208 aa7.97□□□□□ -1.13
PRPF40B-213ENST00000551269 DGAT2L7PQ6IED9 249 aa7.97□□□□□ -1.13
PRPF40B-213ENST00000551269 C20orf203Q8NBC4 194 aa7.97□□□□□ -1.13
PRPF40B-213ENST00000551269 CYSLTR1Q9Y271 337 aa7.97□□□□□ -1.13
PRPF40B-213ENST00000551269 C1orf196B1AJZ1 125 aa7.96□□□□□ -1.14
PRPF40B-213ENST00000551269 RBX1P62877 108 aa7.96□□□□□ -1.14
PRPF40B-213ENST00000551269 Q8N3U1 123 aa7.96□□□□□ -1.14
PRPF40B-213ENST00000551269 Q8N976 141 aa7.96□□□□□ -1.14
PRPF40B-213ENST00000551269 OR5A1Q8NGJ0 315 aa7.96□□□□□ -1.14
PRPF40B-213ENST00000551269 KMT2AQ03164 3969 aa7.95□□□□□ -1.14
PRPF40B-213ENST00000551269 A0A1B0GUV1 79 aa7.95□□□□□ -1.14
PRPF40B-213ENST00000551269 LINC00614P0C842 121 aa7.95□□□□□ -1.14
PRPF40B-213ENST00000551269 RPL39P62891 51 aaKnown RBP7.95□□□□□ -1.14
PRPF40B-213ENST00000551269 C2orf66Q6UXQ4 117 aa7.95□□□□□ -1.14
PRPF40B-213ENST00000551269 MRPL52Q86TS9 123 aaKnown RBP7.95□□□□□ -1.14
PRPF40B-213ENST00000551269 CHCHD1Q96BP2 118 aaKnown RBP7.95□□□□□ -1.14
PRPF40B-213ENST00000551269 SPANXA1Q9NS26 97 aa7.95□□□□□ -1.14
PRPF40B-213ENST00000551269 KLK12Q9UKR0 248 aa7.95□□□□□ -1.14
PRPF40B-213ENST00000551269 LINC01549A6NIU2 74 aa7.94□□□□□ -1.14
PRPF40B-213ENST00000551269 HSBP1O75506 76 aa7.94□□□□□ -1.14
PRPF40B-213ENST00000551269 Q0VG73 95 aa7.94□□□□□ -1.14
PRPF40B-213ENST00000551269 CLPSL2Q6UWE3 100 aa7.94□□□□□ -1.14
PRPF40B-213ENST00000551269 UBE2WQ96B02 151 aa7.94□□□□□ -1.14
PRPF40B-213ENST00000551269 Q9HAA7 133 aa7.94□□□□□ -1.14
PRPF40B-213ENST00000551269 UBE2D4Q9Y2X8 147 aa7.94□□□□□ -1.14
PRPF40B-213ENST00000551269 SACSQ9NZJ4 4579 aa7.93□□□□□ -1.14
PRPF40B-213ENST00000551269 IGLV4-60A0A075B6I1 120 aa7.93□□□□□ -1.14
PRPF40B-213ENST00000551269 LINC01546A6NGU7 62 aa7.93□□□□□ -1.14
PRPF40B-213ENST00000551269 HIST1H2BKO60814 126 aa7.93□□□□□ -1.14
PRPF40B-213ENST00000551269 HBDP02042 147 aa7.93□□□□□ -1.14
PRPF40B-213ENST00000551269 HIST1H2BJP06899 126 aa7.93□□□□□ -1.14
PRPF40B-213ENST00000551269 HIST1H2BOP23527 126 aa7.93□□□□□ -1.14
PRPF40B-213ENST00000551269 HIST1H2BBP33778 126 aa7.93□□□□□ -1.14
PRPF40B-213ENST00000551269 HIST1H2BDP58876 126 aa7.93□□□□□ -1.14
PRPF40B-213ENST00000551269 HIST1H2BCP62807 126 aa7.93□□□□□ -1.14
PRPF40B-213ENST00000551269 HIST2H2BEQ16778 126 aa7.93□□□□□ -1.14
PRPF40B-213ENST00000551269 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.93□□□□□ -1.14
PRPF40B-213ENST00000551269 Q6ZN92 141 aa7.93□□□□□ -1.14
PRPF40B-213ENST00000551269 HIST1H2BHQ93079 126 aa7.93□□□□□ -1.14
PRPF40B-213ENST00000551269 HIST1H2BNQ99877 126 aa7.93□□□□□ -1.14
PRPF40B-213ENST00000551269 HIST1H2BMQ99879 126 aa7.93□□□□□ -1.14
PRPF40B-213ENST00000551269 TIMM21Q9BVV7 248 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms