RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 MRPL53Q96EL3 112 aaKnown RBP6.95□□□□□ -1.3
GPN3-208ENST00000550974 NUDT11Q96G61 164 aa6.95□□□□□ -1.3
GPN3-208ENST00000550974 BTF3L4Q96K17 158 aa6.95□□□□□ -1.3
GPN3-208ENST00000550974 HIST1H2BNQ99877 126 aa6.95□□□□□ -1.3
GPN3-208ENST00000550974 HIST1H2BMQ99879 126 aa6.95□□□□□ -1.3
GPN3-208ENST00000550974 AAMDCQ9H7C9 122 aa6.95□□□□□ -1.3
GPN3-208ENST00000550974 PSG8Q9UQ74 426 aa6.95□□□□□ -1.3
GPN3-208ENST00000550974 IGHV3-64A0A075B6Q5 118 aa6.94□□□□□ -1.3
GPN3-208ENST00000550974 IGKV2-40A0A087WW87 121 aaPredicted RBP6.94□□□□□ -1.3
GPN3-208ENST00000550974 IGHV3-73A0A0B4J1V6 119 aa6.94□□□□□ -1.3
GPN3-208ENST00000550974 FBLL1A6NHQ2 334 aaKnown RBP6.94□□□□□ -1.3
GPN3-208ENST00000550974 IGKV2D-40P01614 121 aaPredicted RBP6.94□□□□□ -1.3
GPN3-208ENST00000550974 Q0VG73 95 aa6.94□□□□□ -1.3
GPN3-208ENST00000550974 PRR26Q8N8Z3 221 aa6.94□□□□□ -1.3
GPN3-208ENST00000550974 AGPAT4-IT1Q9H0P7 198 aa6.94□□□□□ -1.3
GPN3-208ENST00000550974 BIN3Q9NQY0 253 aa6.94□□□□□ -1.3
GPN3-208ENST00000550974 MUC21A0A0G2JKD1 596 aa6.93□□□□□ -1.3
GPN3-208ENST00000550974 TRBV6-4A0A1B0GX49 114 aa6.93□□□□□ -1.3
GPN3-208ENST00000550974 RBAKDNA6NC62 111 aa6.93□□□□□ -1.3
GPN3-208ENST00000550974 GATCO43716 136 aaKnown RBP6.93□□□□□ -1.3
GPN3-208ENST00000550974 TRGC1P0CF51 173 aa6.93□□□□□ -1.3
GPN3-208ENST00000550974 CRISP2P16562 243 aa6.93□□□□□ -1.3
GPN3-208ENST00000550974 PRNTQ86SH4 94 aa6.93□□□□□ -1.3
GPN3-208ENST00000550974 ZFAND2AQ8N6M9 145 aa6.93□□□□□ -1.3
GPN3-208ENST00000550974 RPP21Q9H633 154 aaKnown RBP6.93□□□□□ -1.3
GPN3-208ENST00000550974 ZFP30Q9Y2G7 519 aa6.93□□□□□ -1.3
GPN3-208ENST00000550974 MUC17Q685J3 4493 aa6.93□□□□□ -1.3
GPN3-208ENST00000550974 A0A087WX48 190 aa6.92□□□□□ -1.3
GPN3-208ENST00000550974 A0A1B0GXF2 115 aa6.92□□□□□ -1.3
GPN3-208ENST00000550974 K7EQM0 130 aa6.92□□□□□ -1.3
GPN3-208ENST00000550974 CRIP1P50238 77 aa6.92□□□□□ -1.3
GPN3-208ENST00000550974 PRR27Q6MZM9 219 aa6.92□□□□□ -1.3
GPN3-208ENST00000550974 TSKUQ8WUA8 353 aa6.92□□□□□ -1.3
GPN3-208ENST00000550974 GAGE12JA6NER3 117 aa6.91□□□□□ -1.3
GPN3-208ENST00000550974 IFITM10A6NMD0 228 aa6.91□□□□□ -1.3
GPN3-208ENST00000550974 M0R2P5 195 aa6.91□□□□□ -1.3
GPN3-208ENST00000550974 CSN1S1P47710 185 aa6.91□□□□□ -1.3
GPN3-208ENST00000550974 SNRPEP62304 92 aaKnown RBP6.91□□□□□ -1.3
GPN3-208ENST00000550974 GAGE1Q13065 139 aa6.91□□□□□ -1.3
GPN3-208ENST00000550974 GAGE4Q13068 117 aa6.91□□□□□ -1.3
GPN3-208ENST00000550974 GAGE5Q13069 117 aa6.91□□□□□ -1.3
GPN3-208ENST00000550974 GAGE13Q4V321 117 aa6.91□□□□□ -1.3
GPN3-208ENST00000550974 COA6Q5JTJ3 125 aaKnown RBP6.91□□□□□ -1.3
GPN3-208ENST00000550974 TMEM136Q6ZRR5 245 aa6.91□□□□□ -1.3
GPN3-208ENST00000550974 TRGV11A0A075B6L2 103 aa6.9□□□□□ -1.3
GPN3-208ENST00000550974 P01737 135 aa6.9□□□□□ -1.3
GPN3-208ENST00000550974 MAJINQ3KP22 176 aa6.9□□□□□ -1.3
GPN3-208ENST00000550974 ENHOQ6UWT2 76 aa6.9□□□□□ -1.3
GPN3-208ENST00000550974 NUP35Q8NFH5 326 aa6.9□□□□□ -1.3
GPN3-208ENST00000550974 GFRA4Q9GZZ7 299 aa6.9□□□□□ -1.3
GPN3-208ENST00000550974 NAT8BQ9UHF3 227 aa6.9□□□□□ -1.3
GPN3-208ENST00000550974 SH2D1AO60880 128 aa6.89□□□□□ -1.31
GPN3-208ENST00000550974 CRPP02741 224 aa6.89□□□□□ -1.31
GPN3-208ENST00000550974 ZNF80P51504 273 aaPredicted RBP6.89□□□□□ -1.31
GPN3-208ENST00000550974 FOXA3P55318 350 aaPredicted RBP6.89□□□□□ -1.31
GPN3-208ENST00000550974 CNBPP62633 177 aaKnown RBP6.89□□□□□ -1.31
GPN3-208ENST00000550974 FABP9Q0Z7S8 132 aa6.89□□□□□ -1.31
GPN3-208ENST00000550974 RASL11AQ6T310 242 aa6.89□□□□□ -1.31
GPN3-208ENST00000550974 Q6ZRP5 223 aa6.89□□□□□ -1.31
GPN3-208ENST00000550974 ATP5L2Q7Z4Y8 100 aa6.89□□□□□ -1.31
GPN3-208ENST00000550974 STPG4Q8N801 248 aa6.89□□□□□ -1.31
GPN3-208ENST00000550974 GNB1LQ9BYB4 327 aa6.89□□□□□ -1.31
GPN3-208ENST00000550974 HIGD1CA8MV81 97 aa6.88□□□□□ -1.31
GPN3-208ENST00000550974 A8MWL6 223 aa6.88□□□□□ -1.31
GPN3-208ENST00000550974 MT-ND6P03923 174 aa6.88□□□□□ -1.31
GPN3-208ENST00000550974 S100A6P06703 90 aa6.88□□□□□ -1.31
GPN3-208ENST00000550974 COX19Q49B96 90 aa6.88□□□□□ -1.31
GPN3-208ENST00000550974 SAPCD1Q5SSQ6 148 aa6.88□□□□□ -1.31
GPN3-208ENST00000550974 TMEM78Q5T7P6 136 aa6.88□□□□□ -1.31
GPN3-208ENST00000550974 MRPL54Q6P161 138 aaKnown RBP6.88□□□□□ -1.31
GPN3-208ENST00000550974 FAM159AQ6UWV7 190 aa6.88□□□□□ -1.31
GPN3-208ENST00000550974 HIST3H2BBQ8N257 126 aa6.88□□□□□ -1.31
GPN3-208ENST00000550974 GATD1Q8NB37 220 aa6.88□□□□□ -1.31
GPN3-208ENST00000550974 MRPL18Q9H0U6 180 aaKnown RBP6.88□□□□□ -1.31
GPN3-208ENST00000550974 TRAPPC1Q9Y5R8 145 aa6.88□□□□□ -1.31
GPN3-208ENST00000550974 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.87□□□□□ -1.31
GPN3-208ENST00000550974 IGKV2-24A0A0C4DH68 120 aa6.87□□□□□ -1.31
GPN3-208ENST00000550974 hDV102S1A0JD36 115 aa6.87□□□□□ -1.31
GPN3-208ENST00000550974 GNRH2O43555 120 aa6.87□□□□□ -1.31
GPN3-208ENST00000550974 NDUFA6P56556 154 aa6.87□□□□□ -1.31
GPN3-208ENST00000550974 LINC00310P59036 64 aa6.87□□□□□ -1.31
GPN3-208ENST00000550974 CFAP126Q5VTH2 177 aa6.87□□□□□ -1.31
GPN3-208ENST00000550974 OR2D3Q8NGH3 330 aa6.87□□□□□ -1.31
GPN3-208ENST00000550974 NAGKQ9UJ70 344 aa6.87□□□□□ -1.31
GPN3-208ENST00000550974 IGLC6P0CF74 106 aa6.86□□□□□ -1.31
GPN3-208ENST00000550974 GZMBP10144 247 aa6.86□□□□□ -1.31
GPN3-208ENST00000550974 ZNF138P52744 262 aa6.86□□□□□ -1.31
GPN3-208ENST00000550974 COX6A2Q02221 97 aa6.86□□□□□ -1.31
GPN3-208ENST00000550974 LINC01559Q495D7 138 aa6.86□□□□□ -1.31
GPN3-208ENST00000550974 SMUG1Q53HV7 270 aa6.86□□□□□ -1.31
GPN3-208ENST00000550974 FAM162BQ5T6X4 162 aa6.86□□□□□ -1.31
GPN3-208ENST00000550974 DMRTA1Q5VZB9 504 aa6.86□□□□□ -1.31
GPN3-208ENST00000550974 CHCHD7Q9BUK0 85 aa6.86□□□□□ -1.31
GPN3-208ENST00000550974 LENEPQ9Y5L5 61 aa6.86□□□□□ -1.31
GPN3-208ENST00000550974 CIDEAO60543 219 aa6.85□□□□□ -1.31
GPN3-208ENST00000550974 SLPIP03973 132 aa6.85□□□□□ -1.31
GPN3-208ENST00000550974 LINC00694P0DN24 101 aa6.85□□□□□ -1.31
GPN3-208ENST00000550974 CTRLP40313 264 aa6.85□□□□□ -1.31
GPN3-208ENST00000550974 HBBP68871 147 aa6.85□□□□□ -1.31
GPN3-208ENST00000550974 Q6AWC8 147 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms