RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 GNG5P63218 68 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 PRDX4Q13162 271 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 HLA-DRB5Q30154 266 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 CENPWQ5EE01 88 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 C1orf195Q5TG92 126 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 MINOS1Q5TGZ0 78 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 TEX36Q5VZQ5 186 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 MRPL54Q6P161 138 aaKnown RBP2.18□□□□□ -2.06
LIMA1-205ENST00000550592 UNQ5815/PRO19632Q6UWF5 114 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 GLIPR1L1Q6UWM5 242 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 UBE2DNLQ8IWF7 75 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 C10orf111Q8N326 155 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 TOMM5Q8N4H5 51 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 TTC9CQ8N5M4 171 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 FAM216BQ8N7L0 139 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 OR51A4Q8NGJ6 313 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 OR51A2Q8NGJ7 313 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 OR4X1Q8NH49 305 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 STAG3L4Q8TBR4 150 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 SDF2Q99470 211 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 OR2H1Q9GZK4 316 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 AK3Q9UIJ7 227 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 NOP16Q9Y3C1 178 aaKnown RBP2.18□□□□□ -2.06
LIMA1-205ENST00000550592 MINOS1-NBL1R4GNA1 71 aa2.18□□□□□ -2.06
LIMA1-205ENST00000550592 A0A087WUU8 490 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 C9JAW5 83 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 TMEM262E9PQX1 116 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 ZNF670-ZNF695F2Z2N8 137 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 NDUFC2O95298 119 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 TTRP02766 147 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 TRGC2P03986 189 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 HMGN2P05204 90 aaKnown RBP2.17□□□□□ -2.06
LIMA1-205ENST00000550592 ADCYAP1P18509 176 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 CD24P25063 80 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 G6PCP35575 357 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 OR1E2P47887 323 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 HINT1P49773 126 aaPredicted RBP2.17□□□□□ -2.06
LIMA1-205ENST00000550592 CAV3P56539 151 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 LCN6P62502 163 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 HES1Q14469 280 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 ZNF345Q14585 488 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 MEIG1Q5JSS6 88 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 LCN8Q6JVE9 175 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 RASL11AQ6T310 242 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 C15orf53Q8NAA6 179 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 TMEM229BQ8NBD8 167 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 GPR32P1Q8NGA4 272 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 OR11H6Q8NGC7 330 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 BORCS7Q96B45 105 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 PPCDCQ96CD2 204 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 SLC35B3Q9H1N7 401 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 PRNDQ9UKY0 176 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 HIGD1AQ9Y241 93 aa2.17□□□□□ -2.06
LIMA1-205ENST00000550592 TRAV10A0A0B4J240 114 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 A0A1B0GV50 99 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 DUXBA0A1W2PPF3 345 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 IGLC7A0M8Q6 106 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 C7orf71A4D174 169 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 SDHAF1A6NFY7 115 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 RIIAD1A6NNX1 92 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 ODF3BA8MYP8 253 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 IQCF6A8MYZ5 107 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 UMAD1C9J7I0 102 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 F8W1H4 67 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 CDC42EP2O14613 210 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 ZNF73O43830 326 aaPredicted RBP2.16□□□□□ -2.06
LIMA1-205ENST00000550592 OR2H2O95918 312 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 CRYGDP07320 174 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 SLC25A4P12235 298 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 IFITM1P13164 125 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 CDK2P24941 298 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 PCBD1P61457 104 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 PMCHL1Q16048 86 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 SPATA45Q537H7 98 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 SPATA31B1PQ5VZV4 182 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 FAM19A5Q7Z5A7 132 aaPredicted RBP2.16□□□□□ -2.06
LIMA1-205ENST00000550592 ZFAND2AQ8N6M9 145 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 OR10P1Q8NGE3 313 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 OR8B12Q8NGG6 310 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 OR1L8Q8NGR8 309 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 OR5AK2Q8NH90 309 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 THEM6Q8WUY1 208 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 C20orf166-AS1Q96NR2 134 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 EIF5A2Q9GZV4 153 aaKnown RBP2.16□□□□□ -2.06
LIMA1-205ENST00000550592 SH3BGRL3Q9H299 93 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 MS4A6AQ9H2W1 248 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 TMEM242Q9NWH2 141 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 FUT9Q9Y231 359 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 IER3IP1Q9Y5U9 82 aa2.16□□□□□ -2.06
LIMA1-205ENST00000550592 PKHD1L1Q86WI1 4243 aa2.15□□□□□ -2.06
LIMA1-205ENST00000550592 TMEM212A6NML5 194 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 J3QRE1 110 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 K7EP34 96 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 RER1O15258 196 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 GPX1P07203 203 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 CD7P09564 240 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 IGLC2P0DOY2 106 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 IGLC3P0DOY3 106 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 FABP2P12104 132 aa2.15□□□□□ -2.07
LIMA1-205ENST00000550592 RPL7P18124 248 aaKnown RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms