RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 ALKAL2Q6UX46 152 aa13□□□□□ -0.33
GCN1-207ENST00000550471 DMBT1Q9UGM3 2413 aaPredicted RBP12.99□□□□□ -0.33
GCN1-207ENST00000550471 H7C423 109 aa12.99□□□□□ -0.33
GCN1-207ENST00000550471 SCXQ7RTU7 201 aa12.99□□□□□ -0.33
GCN1-207ENST00000550471 DEFB104AQ8WTQ1 72 aa12.99□□□□□ -0.33
GCN1-207ENST00000550471 FAT1Q14517 4588 aa12.99□□□□□ -0.33
GCN1-207ENST00000550471 VPS13BQ7Z7G8 4022 aa12.98□□□□□ -0.33
GCN1-207ENST00000550471 FOXA3P55318 350 aaPredicted RBP12.98□□□□□ -0.33
GCN1-207ENST00000550471 FAM231BA6NCW3 169 aa12.97□□□□□ -0.33
GCN1-207ENST00000550471 C20orf203Q8NBC4 194 aa12.97□□□□□ -0.33
GCN1-207ENST00000550471 KRTAP26-1Q6PEX3 210 aa12.96□□□□□ -0.33
GCN1-207ENST00000550471 C9orf163Q8N9P6 203 aa12.96□□□□□ -0.33
GCN1-207ENST00000550471 GATD1Q8NB37 220 aa12.96□□□□□ -0.33
GCN1-207ENST00000550471 EIF5A2Q9GZV4 153 aaKnown RBP12.96□□□□□ -0.33
GCN1-207ENST00000550471 GFRA4Q9GZZ7 299 aa12.96□□□□□ -0.33
GCN1-207ENST00000550471 PRSS1P07477 247 aa12.95□□□□□ -0.34
GCN1-207ENST00000550471 LINC01620Q4KN68 170 aa12.95□□□□□ -0.34
GCN1-207ENST00000550471 CFAP161Q6P656 301 aa12.95□□□□□ -0.34
GCN1-207ENST00000550471 CLPSL2Q6UWE3 100 aa12.95□□□□□ -0.34
GCN1-207ENST00000550471 GTSF1Q8WW33 167 aa12.95□□□□□ -0.34
GCN1-207ENST00000550471 AP5S1Q9NUS5 200 aa12.95□□□□□ -0.34
GCN1-207ENST00000550471 DNAH8Q96JB1 4490 aa12.95□□□□□ -0.34
GCN1-207ENST00000550471 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.94□□□□□ -0.34
GCN1-207ENST00000550471 CIRBP-AS1Q8TBR5 109 aa12.94□□□□□ -0.34
GCN1-207ENST00000550471 SMIM7Q9BQ49 75 aa12.94□□□□□ -0.34
GCN1-207ENST00000550471 SRRM2Q9UQ35 2752 aaKnown RBP12.93□□□□□ -0.34
GCN1-207ENST00000550471 CNBPP62633 177 aaKnown RBP12.93□□□□□ -0.34
GCN1-207ENST00000550471 AMMECR1LQ6DCA0 310 aa12.93□□□□□ -0.34
GCN1-207ENST00000550471 hCG_2014768A0A024R1R8 64 aa12.92□□□□□ -0.34
GCN1-207ENST00000550471 IGLV4-60A0A075B6I1 120 aa12.92□□□□□ -0.34
GCN1-207ENST00000550471 APCSP02743 223 aa12.92□□□□□ -0.34
GCN1-207ENST00000550471 TSKUQ8WUA8 353 aa12.92□□□□□ -0.34
GCN1-207ENST00000550471 OSTCQ9NRP0 149 aa12.92□□□□□ -0.34
GCN1-207ENST00000550471 FLG2Q5D862 2391 aaPredicted RBP12.92□□□□□ -0.34
GCN1-207ENST00000550471 TRBV6-5A0A0K0K1A5 114 aa12.91□□□□□ -0.34
GCN1-207ENST00000550471 ZNF727A8MUV8 499 aa12.91□□□□□ -0.34
GCN1-207ENST00000550471 ZNF25P17030 456 aaPredicted RBP12.91□□□□□ -0.34
GCN1-207ENST00000550471 CEBPGP53567 150 aa12.91□□□□□ -0.34
GCN1-207ENST00000550471 FAM74A3Q4VXF1 159 aa12.91□□□□□ -0.34
GCN1-207ENST00000550471 IGLV10-54A0A075B6I4 117 aa12.9□□□□□ -0.34
GCN1-207ENST00000550471 A0A1B0GUT8 65 aa12.9□□□□□ -0.34
GCN1-207ENST00000550471 SDHAF1A6NFY7 115 aa12.9□□□□□ -0.34
GCN1-207ENST00000550471 I3L3M4 83 aa12.9□□□□□ -0.34
GCN1-207ENST00000550471 J3QL48 77 aa12.9□□□□□ -0.34
GCN1-207ENST00000550471 PPP1R17O96001 155 aa12.9□□□□□ -0.34
GCN1-207ENST00000550471 LINC01551Q86U37 167 aa12.9□□□□□ -0.34
GCN1-207ENST00000550471 TRAV26-2A0A0B4J265 109 aa12.89□□□□□ -0.35
GCN1-207ENST00000550471 hDV102S1A0JD36 115 aa12.89□□□□□ -0.35
GCN1-207ENST00000550471 TMEM191AQ9H0A3 160 aa12.89□□□□□ -0.35
GCN1-207ENST00000550471 KRTAP29-1A8MX34 341 aaPredicted RBP12.88□□□□□ -0.35
GCN1-207ENST00000550471 PMCHP20382 165 aa12.88□□□□□ -0.35
GCN1-207ENST00000550471 MRAP2Q96G30 205 aa12.88□□□□□ -0.35
GCN1-207ENST00000550471 TMEM101Q96IK0 257 aa12.88□□□□□ -0.35
GCN1-207ENST00000550471 BTF3L4Q96K17 158 aa12.88□□□□□ -0.35
GCN1-207ENST00000550471 ST20Q9HBF5 79 aa12.88□□□□□ -0.35
GCN1-207ENST00000550471 IGHV3-64A0A075B6Q5 118 aa12.87□□□□□ -0.35
GCN1-207ENST00000550471 HIGD1CA8MV81 97 aa12.87□□□□□ -0.35
GCN1-207ENST00000550471 RPL39LQ96EH5 51 aaKnown RBP12.87□□□□□ -0.35
GCN1-207ENST00000550471 SRP19P09132 144 aaKnown RBP12.86□□□□□ -0.35
GCN1-207ENST00000550471 SMAGPQ0VAQ4 97 aa12.86□□□□□ -0.35
GCN1-207ENST00000550471 RIGQ13278 110 aa12.86□□□□□ -0.35
GCN1-207ENST00000550471 RNASEKQ6P5S7 137 aaKnown RBP12.86□□□□□ -0.35
GCN1-207ENST00000550471 SDIM1Q6ZPB5 146 aa12.86□□□□□ -0.35
GCN1-207ENST00000550471 RNF185Q96GF1 192 aa12.86□□□□□ -0.35
GCN1-207ENST00000550471 SMDT1Q9H4I9 107 aa12.86□□□□□ -0.35
GCN1-207ENST00000550471 FGF6P10767 208 aa12.85□□□□□ -0.35
GCN1-207ENST00000550471 TMEM241Q24JQ0 296 aa12.85□□□□□ -0.35
GCN1-207ENST00000550471 PKIGQ9Y2B9 76 aa12.85□□□□□ -0.35
GCN1-207ENST00000550471 GAGE12HA6NDE8 117 aa12.83□□□□□ -0.36
GCN1-207ENST00000550471 CIRBPQ14011 172 aaKnown RBP12.83□□□□□ -0.36
GCN1-207ENST00000550471 OR5A1Q8NGJ0 315 aa12.83□□□□□ -0.36
GCN1-207ENST00000550471 TRBV27A0A0K0K1C4 114 aa12.82□□□□□ -0.36
GCN1-207ENST00000550471 OXTP01178 125 aa12.82□□□□□ -0.36
GCN1-207ENST00000550471 RPL37AP61513 92 aaKnown RBP12.82□□□□□ -0.36
GCN1-207ENST00000550471 NAT8BQ9UHF3 227 aa12.82□□□□□ -0.36
GCN1-207ENST00000550471 ESDP10768 282 aa12.81□□□□□ -0.36
GCN1-207ENST00000550471 RAB4AP20338 218 aa12.81□□□□□ -0.36
GCN1-207ENST00000550471 PEA15Q15121 130 aa12.81□□□□□ -0.36
GCN1-207ENST00000550471 CHCHD10Q8WYQ3 142 aaPredicted RBP12.81□□□□□ -0.36
GCN1-207ENST00000550471 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.8□□□□□ -0.36
GCN1-207ENST00000550471 A0A1B0GW15 77 aa12.8□□□□□ -0.36
GCN1-207ENST00000550471 IGKV2-29A2NJV5 120 aaPredicted RBP12.8□□□□□ -0.36
GCN1-207ENST00000550471 VCYO14598 125 aa12.8□□□□□ -0.36
GCN1-207ENST00000550471 PPP1R2P9O14990 202 aa12.8□□□□□ -0.36
GCN1-207ENST00000550471 POLR2KP53803 58 aaKnown RBP12.8□□□□□ -0.36
GCN1-207ENST00000550471 MRPL52Q86TS9 123 aaKnown RBP12.8□□□□□ -0.36
GCN1-207ENST00000550471 ISOC2Q96AB3 205 aa12.8□□□□□ -0.36
GCN1-207ENST00000550471 NAT8Q9UHE5 227 aa12.8□□□□□ -0.36
GCN1-207ENST00000550471 V9GYV3 84 aa12.8□□□□□ -0.36
GCN1-207ENST00000550471 IGKV3OR2-268A0A0C4DH90 116 aa12.79□□□□□ -0.36
GCN1-207ENST00000550471 CCL25O15444 150 aa12.79□□□□□ -0.36
GCN1-207ENST00000550471 RPS10P46783 165 aaKnown RBP12.79□□□□□ -0.36
GCN1-207ENST00000550471 KRTAP10-4P60372 401 aaPredicted RBP12.79□□□□□ -0.36
GCN1-207ENST00000550471 MYCBP2O75592 4640 aa12.79□□□□□ -0.36
GCN1-207ENST00000550471 C7orf77A4D0Y5 90 aa12.78□□□□□ -0.36
GCN1-207ENST00000550471 TCAPO15273 167 aa12.78□□□□□ -0.36
GCN1-207ENST00000550471 NUP35Q8NFH5 326 aa12.78□□□□□ -0.36
GCN1-207ENST00000550471 DPH3Q96FX2 82 aa12.78□□□□□ -0.36
GCN1-207ENST00000550471 KIR2DL4Q99706 377 aa12.78□□□□□ -0.36
GCN1-207ENST00000550471 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms