RNA–Protein interactions for RNA: ENST00000550444.1

HCFC2-205, Transcript of host cell factor C2, humanhuman

TSL 4

Gene HCFC2, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-205ENST00000550444 FAM213BQ8TBF2 198 aa10.77□□□□□ -0.69
HCFC2-205ENST00000550444 ARPC5O15511 151 aa10.76□□□□□ -0.69
HCFC2-205ENST00000550444 AMTP48728 403 aa10.76□□□□□ -0.69
HCFC2-205ENST00000550444 FER1L6-AS1Q8NA97 138 aa10.76□□□□□ -0.69
HCFC2-205ENST00000550444 COTL1Q14019 142 aa10.75□□□□□ -0.69
HCFC2-205ENST00000550444 A0A0J9YXV3 536 aa10.74□□□□□ -0.69
HCFC2-205ENST00000550444 RPL35P42766 123 aaKnown RBP10.74□□□□□ -0.69
HCFC2-205ENST00000550444 KCNRGQ8N5I3 272 aa10.74□□□□□ -0.69
HCFC2-205ENST00000550444 OR2D3Q8NGH3 330 aa10.74□□□□□ -0.69
HCFC2-205ENST00000550444 MBD3L1Q8WWY6 194 aa10.74□□□□□ -0.69
HCFC2-205ENST00000550444 NIT2Q9NQR4 276 aa10.74□□□□□ -0.69
HCFC2-205ENST00000550444 IGLC6P0CF74 106 aa10.73□□□□□ -0.69
HCFC2-205ENST00000550444 CACNG7P62955 275 aa10.73□□□□□ -0.69
HCFC2-205ENST00000550444 PGLYRP4Q96LB8 373 aa10.73□□□□□ -0.69
HCFC2-205ENST00000550444 KRTAP10-8P60410 259 aa10.72□□□□□ -0.69
HCFC2-205ENST00000550444 RPS20P60866 119 aaKnown RBP10.72□□□□□ -0.69
HCFC2-205ENST00000550444 A0A096LNI7 61 aa10.71□□□□□ -0.69
HCFC2-205ENST00000550444 G3V3Q6 166 aa10.71□□□□□ -0.69
HCFC2-205ENST00000550444 TRGC1P0CF51 173 aa10.71□□□□□ -0.69
HCFC2-205ENST00000550444 REG3GQ6UW15 175 aa10.71□□□□□ -0.69
HCFC2-205ENST00000550444 SPINK6Q6UWN8 80 aa10.71□□□□□ -0.69
HCFC2-205ENST00000550444 CHCHD10Q8WYQ3 142 aaPredicted RBP10.71□□□□□ -0.69
HCFC2-205ENST00000550444 CENPWQ5EE01 88 aa10.7□□□□□ -0.7
HCFC2-205ENST00000550444 AMMECR1LQ6DCA0 310 aa10.7□□□□□ -0.7
HCFC2-205ENST00000550444 UMAD1C9J7I0 102 aa10.69□□□□□ -0.7
HCFC2-205ENST00000550444 H2AFB1P0C5Y9 115 aa10.69□□□□□ -0.7
HCFC2-205ENST00000550444 NTF3P20783 257 aa10.69□□□□□ -0.7
HCFC2-205ENST00000550444 RNASEKQ6P5S7 137 aaKnown RBP10.69□□□□□ -0.7
HCFC2-205ENST00000550444 LYZL1Q6UWQ5 148 aa10.69□□□□□ -0.7
HCFC2-205ENST00000550444 XKRY2A2RUG3 117 aa10.68□□□□□ -0.7
HCFC2-205ENST00000550444 F2Z2F3 143 aa10.68□□□□□ -0.7
HCFC2-205ENST00000550444 SMLR1H3BR10 107 aa10.68□□□□□ -0.7
HCFC2-205ENST00000550444 GAS8-AS1O95177 125 aa10.68□□□□□ -0.7
HCFC2-205ENST00000550444 GVQW2A0A096LPI5 108 aaPredicted RBP10.67□□□□□ -0.7
HCFC2-205ENST00000550444 RAB19A4D1S5 217 aa10.67□□□□□ -0.7
HCFC2-205ENST00000550444 C19orf71A6NCJ1 209 aa10.67□□□□□ -0.7
HCFC2-205ENST00000550444 IFNA1P01562 189 aa10.67□□□□□ -0.7
HCFC2-205ENST00000550444 GNG13Q9P2W3 67 aa10.67□□□□□ -0.7
HCFC2-205ENST00000550444 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.66□□□□□ -0.7
HCFC2-205ENST00000550444 IGKV2-29A2NJV5 120 aaPredicted RBP10.66□□□□□ -0.7
HCFC2-205ENST00000550444 LINC00526Q96FQ7 95 aa10.66□□□□□ -0.7
HCFC2-205ENST00000550444 LINC00474Q9P2X8 69 aa10.66□□□□□ -0.7
HCFC2-205ENST00000550444 TRAV26-2A0A0B4J265 109 aa10.65□□□□□ -0.7
HCFC2-205ENST00000550444 CCL20P78556 96 aa10.65□□□□□ -0.7
HCFC2-205ENST00000550444 FOXI1Q12951 378 aa10.65□□□□□ -0.7
HCFC2-205ENST00000550444 SRSF9Q13242 221 aaKnown RBP eCLIP10.65□□□□□ -0.7
HCFC2-205ENST00000550444 TWIST1Q15672 202 aa10.65□□□□□ -0.7
HCFC2-205ENST00000550444 Q6ZNX1 250 aa10.65□□□□□ -0.7
HCFC2-205ENST00000550444 GATD1Q8NB37 220 aa10.65□□□□□ -0.7
HCFC2-205ENST00000550444 C11orf52Q96A22 123 aa10.65□□□□□ -0.7
HCFC2-205ENST00000550444 XCL1P47992 114 aa10.64□□□□□ -0.71
HCFC2-205ENST00000550444 GNG4P50150 75 aa10.64□□□□□ -0.71
HCFC2-205ENST00000550444 Q6ZRP5 223 aa10.64□□□□□ -0.71
HCFC2-205ENST00000550444 MANBALQ9NQG1 85 aa10.64□□□□□ -0.71
HCFC2-205ENST00000550444 FGF6P10767 208 aa10.63□□□□□ -0.71
HCFC2-205ENST00000550444 APCSP02743 223 aa10.62□□□□□ -0.71
HCFC2-205ENST00000550444 C9orf62Q8N4C0 152 aa10.62□□□□□ -0.71
HCFC2-205ENST00000550444 RPL39LQ96EH5 51 aaKnown RBP10.62□□□□□ -0.71
HCFC2-205ENST00000550444 CARD19Q96LW7 228 aa10.62□□□□□ -0.71
HCFC2-205ENST00000550444 PKIGQ9Y2B9 76 aa10.62□□□□□ -0.71
HCFC2-205ENST00000550444 IGHV1-58A0A0C4DH39 117 aa10.61□□□□□ -0.71
HCFC2-205ENST00000550444 KANTRA0A1W2PQU2 76 aa10.61□□□□□ -0.71
HCFC2-205ENST00000550444 CCL25O15444 150 aa10.61□□□□□ -0.71
HCFC2-205ENST00000550444 OR5A1Q8NGJ0 315 aa10.61□□□□□ -0.71
HCFC2-205ENST00000550444 H7C423 109 aa10.6□□□□□ -0.71
HCFC2-205ENST00000550444 NCR2O95944 276 aa10.6□□□□□ -0.71
HCFC2-205ENST00000550444 ZNF345Q14585 488 aa10.6□□□□□ -0.71
HCFC2-205ENST00000550444 NUDT10Q8NFP7 164 aa10.6□□□□□ -0.71
HCFC2-205ENST00000550444 NUDT11Q96G61 164 aa10.6□□□□□ -0.71
HCFC2-205ENST00000550444 BTF3L4Q96K17 158 aa10.6□□□□□ -0.71
HCFC2-205ENST00000550444 LINC00959A0A1B0GUT2 108 aa10.59□□□□□ -0.71
HCFC2-205ENST00000550444 ZNF561-AS1K7EIQ3 104 aa10.59□□□□□ -0.71
HCFC2-205ENST00000550444 CTRLP40313 264 aa10.59□□□□□ -0.71
HCFC2-205ENST00000550444 SMIM12Q96EX1 92 aa10.59□□□□□ -0.71
HCFC2-205ENST00000550444 TMEM101Q96IK0 257 aa10.59□□□□□ -0.71
HCFC2-205ENST00000550444 BIN3Q9NQY0 253 aa10.59□□□□□ -0.71
HCFC2-205ENST00000550444 MED9Q9NWA0 146 aa10.59□□□□□ -0.71
HCFC2-205ENST00000550444 BCL2L11O43521 198 aa10.58□□□□□ -0.72
HCFC2-205ENST00000550444 PMCHP20382 165 aa10.58□□□□□ -0.72
HCFC2-205ENST00000550444 FOXA3P55318 350 aaPredicted RBP10.58□□□□□ -0.72
HCFC2-205ENST00000550444 SYCNQ0VAF6 134 aa10.58□□□□□ -0.72
HCFC2-205ENST00000550444 GAGE2BQ13066 116 aa10.58□□□□□ -0.72
HCFC2-205ENST00000550444 LPAP08519 4548 aa10.57□□□□□ -0.72
HCFC2-205ENST00000550444 SDHAF1A6NFY7 115 aa10.57□□□□□ -0.72
HCFC2-205ENST00000550444 EIF5AP63241 154 aaKnown RBP10.57□□□□□ -0.72
HCFC2-205ENST00000550444 SMIM15Q7Z3B0 74 aa10.57□□□□□ -0.72
HCFC2-205ENST00000550444 TRBV20OR9-2A0A075B6H5 130 aa10.56□□□□□ -0.72
HCFC2-205ENST00000550444 ZNF25P17030 456 aaPredicted RBP10.56□□□□□ -0.72
HCFC2-205ENST00000550444 PTTG1IPP53801 180 aa10.56□□□□□ -0.72
HCFC2-205ENST00000550444 SS18Q15532 418 aa10.56□□□□□ -0.72
HCFC2-205ENST00000550444 TRAV1-1A0A0B4J248 108 aa10.55□□□□□ -0.72
HCFC2-205ENST00000550444 FAM231BA6NCW3 169 aa10.55□□□□□ -0.72
HCFC2-205ENST00000550444 TEX46H3BTG2 121 aa10.55□□□□□ -0.72
HCFC2-205ENST00000550444 I3L3M4 83 aa10.55□□□□□ -0.72
HCFC2-205ENST00000550444 PDE6DO43924 150 aa10.55□□□□□ -0.72
HCFC2-205ENST00000550444 MEF2BQ02080 365 aaPredicted RBP10.55□□□□□ -0.72
HCFC2-205ENST00000550444 CNFNQ9BYD5 112 aa10.55□□□□□ -0.72
HCFC2-205ENST00000550444 RNASE7Q9H1E1 156 aaKnown RBP10.55□□□□□ -0.72
HCFC2-205ENST00000550444 RPP21Q9H633 154 aaKnown RBP10.55□□□□□ -0.72
HCFC2-205ENST00000550444 LOC107984640A0A0U1RRK4 108 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms