RNA–Protein interactions for RNA: ENST00000549718.5

LINC00661-205, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-205ENST00000549718 A0A1B0GUV1 79 aa10.45□□□□□ -0.74
LINC00661-205ENST00000549718 AMTP48728 403 aa10.45□□□□□ -0.74
LINC00661-205ENST00000549718 BLOC1S1P78537 153 aa10.45□□□□□ -0.74
LINC00661-205ENST00000549718 COTL1Q14019 142 aa10.45□□□□□ -0.74
LINC00661-205ENST00000549718 GFRA4Q9GZZ7 299 aa10.45□□□□□ -0.74
LINC00661-205ENST00000549718 TRAV26-2A0A0B4J265 109 aa10.44□□□□□ -0.74
LINC00661-205ENST00000549718 TMEM250H0YL14 139 aa10.44□□□□□ -0.74
LINC00661-205ENST00000549718 UBE2L6O14933 153 aa10.44□□□□□ -0.74
LINC00661-205ENST00000549718 GATD1Q8NB37 220 aa10.44□□□□□ -0.74
LINC00661-205ENST00000549718 J3QL48 77 aa10.43□□□□□ -0.74
LINC00661-205ENST00000549718 DGAT2L7PQ6IED9 249 aa10.43□□□□□ -0.74
LINC00661-205ENST00000549718 GTSF1Q8WW33 167 aa10.43□□□□□ -0.74
LINC00661-205ENST00000549718 TRAV8-4A0A0B4J246 113 aa10.42□□□□□ -0.74
LINC00661-205ENST00000549718 GATCO43716 136 aaKnown RBP10.42□□□□□ -0.74
LINC00661-205ENST00000549718 KRTAP10-4P60372 401 aaPredicted RBP10.42□□□□□ -0.74
LINC00661-205ENST00000549718 C9orf163Q8N9P6 203 aa10.42□□□□□ -0.74
LINC00661-205ENST00000549718 CEBPGP53567 150 aa10.41□□□□□ -0.74
LINC00661-205ENST00000549718 FAM231DQ6ZW35 169 aa10.41□□□□□ -0.74
LINC00661-205ENST00000549718 SMIM15Q7Z3B0 74 aa10.41□□□□□ -0.74
LINC00661-205ENST00000549718 CLRN3Q8NCR9 226 aa10.41□□□□□ -0.74
LINC00661-205ENST00000549718 LYPD6BQ8NI32 183 aa10.41□□□□□ -0.74
LINC00661-205ENST00000549718 RPL39LQ96EH5 51 aaKnown RBP10.41□□□□□ -0.74
LINC00661-205ENST00000549718 FOXA3P55318 350 aaPredicted RBP10.4□□□□□ -0.74
LINC00661-205ENST00000549718 hDV102S1A0JD36 115 aa10.39□□□□□ -0.75
LINC00661-205ENST00000549718 A8MWL6 223 aa10.39□□□□□ -0.75
LINC00661-205ENST00000549718 KRTAP29-1A8MX34 341 aaPredicted RBP10.39□□□□□ -0.75
LINC00661-205ENST00000549718 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.39□□□□□ -0.75
LINC00661-205ENST00000549718 CNBPP62633 177 aaKnown RBP10.38□□□□□ -0.75
LINC00661-205ENST00000549718 CT83Q5H943 113 aa10.38□□□□□ -0.75
LINC00661-205ENST00000549718 TEX261Q6UWH6 196 aa10.38□□□□□ -0.75
LINC00661-205ENST00000549718 SMIM7Q9BQ49 75 aa10.38□□□□□ -0.75
LINC00661-205ENST00000549718 SDHAF1A6NFY7 115 aa10.37□□□□□ -0.75
LINC00661-205ENST00000549718 PANO1I0J062 215 aa10.37□□□□□ -0.75
LINC00661-205ENST00000549718 NCR2O95944 276 aa10.37□□□□□ -0.75
LINC00661-205ENST00000549718 APCSP02743 223 aa10.37□□□□□ -0.75
LINC00661-205ENST00000549718 EIF5A2Q9GZV4 153 aaKnown RBP10.37□□□□□ -0.75
LINC00661-205ENST00000549718 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.36□□□□□ -0.75
LINC00661-205ENST00000549718 IGKV3OR2-268A0A0C4DH90 116 aa10.36□□□□□ -0.75
LINC00661-205ENST00000549718 IGKV2-29A2NJV5 120 aaPredicted RBP10.36□□□□□ -0.75
LINC00661-205ENST00000549718 AMMECR1LQ6DCA0 310 aa10.36□□□□□ -0.75
LINC00661-205ENST00000549718 SDIM1Q6ZPB5 146 aa10.36□□□□□ -0.75
LINC00661-205ENST00000549718 BORCS7Q96B45 105 aa10.36□□□□□ -0.75
LINC00661-205ENST00000549718 AP5S1Q9NUS5 200 aa10.36□□□□□ -0.75
LINC00661-205ENST00000549718 RPL37AP61513 92 aaKnown RBP10.35□□□□□ -0.75
LINC00661-205ENST00000549718 RNASEKQ6P5S7 137 aaKnown RBP10.35□□□□□ -0.75
LINC00661-205ENST00000549718 LINC01551Q86U37 167 aa10.35□□□□□ -0.75
LINC00661-205ENST00000549718 FAM210AQ96ND0 272 aa10.35□□□□□ -0.75
LINC00661-205ENST00000549718 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.34□□□□□ -0.75
LINC00661-205ENST00000549718 GAGE12HA6NDE8 117 aa10.34□□□□□ -0.75
LINC00661-205ENST00000549718 H7C423 109 aa10.34□□□□□ -0.75
LINC00661-205ENST00000549718 C15orf56Q8N910 161 aa10.34□□□□□ -0.75
LINC00661-205ENST00000549718 IGHV3-64A0A075B6Q5 118 aa10.33□□□□□ -0.76
LINC00661-205ENST00000549718 TRBV6-5A0A0K0K1A5 114 aa10.33□□□□□ -0.76
LINC00661-205ENST00000549718 ZNF727A8MUV8 499 aa10.33□□□□□ -0.76
LINC00661-205ENST00000549718 HIGD1CA8MV81 97 aa10.33□□□□□ -0.76
LINC00661-205ENST00000549718 NDUFS6O75380 124 aaKnown RBP10.33□□□□□ -0.76
LINC00661-205ENST00000549718 SLPIP03973 132 aa10.33□□□□□ -0.76
LINC00661-205ENST00000549718 FGF6P10767 208 aa10.33□□□□□ -0.76
LINC00661-205ENST00000549718 TSKUQ8WUA8 353 aa10.33□□□□□ -0.76
LINC00661-205ENST00000549718 A0A1B0GUT8 65 aa10.32□□□□□ -0.76
LINC00661-205ENST00000549718 I3L3M4 83 aa10.32□□□□□ -0.76
LINC00661-205ENST00000549718 GAS8-AS1O95177 125 aa10.32□□□□□ -0.76
LINC00661-205ENST00000549718 PMCHP20382 165 aa10.32□□□□□ -0.76
LINC00661-205ENST00000549718 CIRBPQ14011 172 aaKnown RBP10.32□□□□□ -0.76
LINC00661-205ENST00000549718 CHCHD10Q8WYQ3 142 aaPredicted RBP10.32□□□□□ -0.76
LINC00661-205ENST00000549718 SRP19P09132 144 aaKnown RBP10.31□□□□□ -0.76
LINC00661-205ENST00000549718 ZNF25P17030 456 aaPredicted RBP10.31□□□□□ -0.76
LINC00661-205ENST00000549718 TMEM191AQ9H0A3 160 aa10.31□□□□□ -0.76
LINC00661-205ENST00000549718 OSTCQ9NRP0 149 aa10.31□□□□□ -0.76
LINC00661-205ENST00000549718 TMEM242Q9NWH2 141 aa10.31□□□□□ -0.76
LINC00661-205ENST00000549718 LRP1Q07954 4544 aaKnown RBP10.31□□□□□ -0.76
LINC00661-205ENST00000549718 PKHD1L1Q86WI1 4243 aa10.31□□□□□ -0.76
LINC00661-205ENST00000549718 FAM231BA6NCW3 169 aa10.3□□□□□ -0.76
LINC00661-205ENST00000549718 TSHBP01222 138 aa10.3□□□□□ -0.76
LINC00661-205ENST00000549718 CHTF8P0CG12 524 aa10.3□□□□□ -0.76
LINC00661-205ENST00000549718 HIGD2BQ4VC39 106 aa10.3□□□□□ -0.76
LINC00661-205ENST00000549718 CFAP161Q6P656 301 aa10.3□□□□□ -0.76
LINC00661-205ENST00000549718 RNF185Q96GF1 192 aa10.3□□□□□ -0.76
LINC00661-205ENST00000549718 ST20Q9HBF5 79 aa10.3□□□□□ -0.76
LINC00661-205ENST00000549718 OXTP01178 125 aa10.29□□□□□ -0.76
LINC00661-205ENST00000549718 RPS10P46783 165 aaKnown RBP10.29□□□□□ -0.76
LINC00661-205ENST00000549718 HNRNPA3P51991 378 aaKnown RBP10.29□□□□□ -0.76
LINC00661-205ENST00000549718 OR5A1Q8NGJ0 315 aa10.29□□□□□ -0.76
LINC00661-205ENST00000549718 BTF3L4Q96K17 158 aa10.29□□□□□ -0.76
LINC00661-205ENST00000549718 V9GYV3 84 aa10.29□□□□□ -0.76
LINC00661-205ENST00000549718 ESDP10768 282 aa10.28□□□□□ -0.76
LINC00661-205ENST00000549718 RAB4AP20338 218 aa10.28□□□□□ -0.76
LINC00661-205ENST00000549718 AMN1Q8IY45 258 aa10.28□□□□□ -0.76
LINC00661-205ENST00000549718 SPACA4Q8TDM5 124 aa10.28□□□□□ -0.76
LINC00661-205ENST00000549718 MRAP2Q96G30 205 aa10.28□□□□□ -0.76
LINC00661-205ENST00000549718 TMEM101Q96IK0 257 aa10.28□□□□□ -0.76
LINC00661-205ENST00000549718 FAT3Q8TDW7 4589 aa10.28□□□□□ -0.76
LINC00661-205ENST00000549718 A0A087WYN8 130 aa10.27□□□□□ -0.77
LINC00661-205ENST00000549718 A0A1B0GVG6 124 aa10.27□□□□□ -0.77
LINC00661-205ENST00000549718 ISOC2Q96AB3 205 aa10.27□□□□□ -0.77
LINC00661-205ENST00000549718 GVQW2A0A096LPI5 108 aaPredicted RBP10.26□□□□□ -0.77
LINC00661-205ENST00000549718 TRBV27A0A0K0K1C4 114 aa10.26□□□□□ -0.77
LINC00661-205ENST00000549718 XCL1P47992 114 aa10.26□□□□□ -0.77
LINC00661-205ENST00000549718 POLR2KP53803 58 aaKnown RBP10.26□□□□□ -0.77
LINC00661-205ENST00000549718 FOXI1Q12951 378 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms