RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 GTSF1Q8WW33 167 aa12.67□□□□□ -0.38
ATF1-202ENST00000549612 CIRBP-AS1Q8TBR5 109 aa12.66□□□□□ -0.38
ATF1-202ENST00000549612 IGLV4-60A0A075B6I1 120 aa12.65□□□□□ -0.38
ATF1-202ENST00000549612 COTL1Q14019 142 aa12.65□□□□□ -0.38
ATF1-202ENST00000549612 DGAT2L7PQ6IED9 249 aa12.65□□□□□ -0.38
ATF1-202ENST00000549612 FAM231DQ6ZW35 169 aa12.65□□□□□ -0.38
ATF1-202ENST00000549612 GATD1Q8NB37 220 aa12.65□□□□□ -0.38
ATF1-202ENST00000549612 TRAV8-4A0A0B4J246 113 aa12.64□□□□□ -0.39
ATF1-202ENST00000549612 GFRA4Q9GZZ7 299 aa12.64□□□□□ -0.39
ATF1-202ENST00000549612 IGLV10-54A0A075B6I4 117 aa12.63□□□□□ -0.39
ATF1-202ENST00000549612 TRAV26-2A0A0B4J265 109 aa12.63□□□□□ -0.39
ATF1-202ENST00000549612 GATCO43716 136 aaKnown RBP12.63□□□□□ -0.39
ATF1-202ENST00000549612 AMTP48728 403 aa12.63□□□□□ -0.39
ATF1-202ENST00000549612 UBE2L6O14933 153 aa12.62□□□□□ -0.39
ATF1-202ENST00000549612 CT83Q5H943 113 aa12.62□□□□□ -0.39
ATF1-202ENST00000549612 SMIM15Q7Z3B0 74 aa12.62□□□□□ -0.39
ATF1-202ENST00000549612 C9orf163Q8N9P6 203 aa12.62□□□□□ -0.39
ATF1-202ENST00000549612 CLRN3Q8NCR9 226 aa12.62□□□□□ -0.39
ATF1-202ENST00000549612 DEFB104AQ8WTQ1 72 aa12.62□□□□□ -0.39
ATF1-202ENST00000549612 A8MWL6 223 aa12.61□□□□□ -0.39
ATF1-202ENST00000549612 NDUFS6O75380 124 aaKnown RBP12.61□□□□□ -0.39
ATF1-202ENST00000549612 FOXA3P55318 350 aaPredicted RBP12.61□□□□□ -0.39
ATF1-202ENST00000549612 KRTAP10-4P60372 401 aaPredicted RBP12.61□□□□□ -0.39
ATF1-202ENST00000549612 TEX261Q6UWH6 196 aa12.6□□□□□ -0.39
ATF1-202ENST00000549612 RPL39LQ96EH5 51 aaKnown RBP12.6□□□□□ -0.39
ATF1-202ENST00000549612 NCR2O95944 276 aa12.59□□□□□ -0.39
ATF1-202ENST00000549612 CEBPGP53567 150 aa12.59□□□□□ -0.39
ATF1-202ENST00000549612 CNBPP62633 177 aaKnown RBP12.58□□□□□ -0.4
ATF1-202ENST00000549612 SMIM7Q9BQ49 75 aa12.58□□□□□ -0.4
ATF1-202ENST00000549612 EIF5A2Q9GZV4 153 aaKnown RBP12.58□□□□□ -0.4
ATF1-202ENST00000549612 LINC01551Q86U37 167 aa12.57□□□□□ -0.4
ATF1-202ENST00000549612 FAM210AQ96ND0 272 aa12.57□□□□□ -0.4
ATF1-202ENST00000549612 hDV102S1A0JD36 115 aa12.56□□□□□ -0.4
ATF1-202ENST00000549612 SDHAF1A6NFY7 115 aa12.56□□□□□ -0.4
ATF1-202ENST00000549612 SDIM1Q6ZPB5 146 aa12.56□□□□□ -0.4
ATF1-202ENST00000549612 TRBV6-5A0A0K0K1A5 114 aa12.55□□□□□ -0.4
ATF1-202ENST00000549612 KRTAP29-1A8MX34 341 aaPredicted RBP12.55□□□□□ -0.4
ATF1-202ENST00000549612 H7C423 109 aa12.55□□□□□ -0.4
ATF1-202ENST00000549612 J3QL48 77 aa12.55□□□□□ -0.4
ATF1-202ENST00000549612 APCSP02743 223 aa12.55□□□□□ -0.4
ATF1-202ENST00000549612 TSKUQ8WUA8 353 aa12.55□□□□□ -0.4
ATF1-202ENST00000549612 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.55□□□□□ -0.4
ATF1-202ENST00000549612 FAM231BA6NCW3 169 aa12.54□□□□□ -0.4
ATF1-202ENST00000549612 BORCS7Q96B45 105 aa12.54□□□□□ -0.4
ATF1-202ENST00000549612 OSTCQ9NRP0 149 aa12.54□□□□□ -0.4
ATF1-202ENST00000549612 A0A1B0GUT8 65 aa12.53□□□□□ -0.4
ATF1-202ENST00000549612 ZNF727A8MUV8 499 aa12.53□□□□□ -0.4
ATF1-202ENST00000549612 HIGD1CA8MV81 97 aa12.53□□□□□ -0.4
ATF1-202ENST00000549612 SRP19P09132 144 aaKnown RBP12.53□□□□□ -0.4
ATF1-202ENST00000549612 AMMECR1LQ6DCA0 310 aa12.53□□□□□ -0.4
ATF1-202ENST00000549612 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.52□□□□□ -0.41
ATF1-202ENST00000549612 IGKV2-29A2NJV5 120 aaPredicted RBP12.52□□□□□ -0.41
ATF1-202ENST00000549612 PANO1I0J062 215 aa12.52□□□□□ -0.41
ATF1-202ENST00000549612 I3L3M4 83 aa12.52□□□□□ -0.41
ATF1-202ENST00000549612 TMEM191AQ9H0A3 160 aa12.52□□□□□ -0.41
ATF1-202ENST00000549612 AP5S1Q9NUS5 200 aa12.52□□□□□ -0.41
ATF1-202ENST00000549612 GAGE12HA6NDE8 117 aa12.51□□□□□ -0.41
ATF1-202ENST00000549612 GAS8-AS1O95177 125 aa12.51□□□□□ -0.41
ATF1-202ENST00000549612 SLPIP03973 132 aa12.51□□□□□ -0.41
ATF1-202ENST00000549612 FGF6P10767 208 aa12.51□□□□□ -0.41
ATF1-202ENST00000549612 CIRBPQ14011 172 aaKnown RBP12.51□□□□□ -0.41
ATF1-202ENST00000549612 RNASEKQ6P5S7 137 aaKnown RBP12.51□□□□□ -0.41
ATF1-202ENST00000549612 C15orf56Q8N910 161 aa12.51□□□□□ -0.41
ATF1-202ENST00000549612 IGHV3-64A0A075B6Q5 118 aa12.5□□□□□ -0.41
ATF1-202ENST00000549612 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.5□□□□□ -0.41
ATF1-202ENST00000549612 IGKV3OR2-268A0A0C4DH90 116 aa12.5□□□□□ -0.41
ATF1-202ENST00000549612 ZNF25P17030 456 aaPredicted RBP12.5□□□□□ -0.41
ATF1-202ENST00000549612 PMCHP20382 165 aa12.5□□□□□ -0.41
ATF1-202ENST00000549612 RNF185Q96GF1 192 aa12.5□□□□□ -0.41
ATF1-202ENST00000549612 A0A1B0GVG6 124 aa12.49□□□□□ -0.41
ATF1-202ENST00000549612 RPL37AP61513 92 aaKnown RBP12.49□□□□□ -0.41
ATF1-202ENST00000549612 CFAP161Q6P656 301 aa12.49□□□□□ -0.41
ATF1-202ENST00000549612 CHCHD10Q8WYQ3 142 aaPredicted RBP12.49□□□□□ -0.41
ATF1-202ENST00000549612 ST20Q9HBF5 79 aa12.49□□□□□ -0.41
ATF1-202ENST00000549612 V9GYV3 84 aa12.49□□□□□ -0.41
ATF1-202ENST00000549612 TSHBP01222 138 aa12.48□□□□□ -0.41
ATF1-202ENST00000549612 ESDP10768 282 aa12.48□□□□□ -0.41
ATF1-202ENST00000549612 RAB4AP20338 218 aa12.48□□□□□ -0.41
ATF1-202ENST00000549612 MRAP2Q96G30 205 aa12.48□□□□□ -0.41
ATF1-202ENST00000549612 RPS10P46783 165 aaKnown RBP12.47□□□□□ -0.41
ATF1-202ENST00000549612 POLR2KP53803 58 aaKnown RBP12.47□□□□□ -0.41
ATF1-202ENST00000549612 FAM74A3Q4VXF1 159 aa12.47□□□□□ -0.41
ATF1-202ENST00000549612 ISOC2Q96AB3 205 aa12.47□□□□□ -0.41
ATF1-202ENST00000549612 LRP1Q07954 4544 aaKnown RBP12.47□□□□□ -0.41
ATF1-202ENST00000549612 PKHD1L1Q86WI1 4243 aa12.46□□□□□ -0.41
ATF1-202ENST00000549612 TRBV27A0A0K0K1C4 114 aa12.46□□□□□ -0.41
ATF1-202ENST00000549612 AMN1Q8IY45 258 aa12.46□□□□□ -0.41
ATF1-202ENST00000549612 NUP35Q8NFH5 326 aa12.46□□□□□ -0.41
ATF1-202ENST00000549612 OR5A1Q8NGJ0 315 aa12.46□□□□□ -0.41
ATF1-202ENST00000549612 TMEM242Q9NWH2 141 aa12.46□□□□□ -0.41
ATF1-202ENST00000549612 RIGQ13278 110 aa12.45□□□□□ -0.42
ATF1-202ENST00000549612 TMEM241Q24JQ0 296 aa12.45□□□□□ -0.42
ATF1-202ENST00000549612 TMEM101Q96IK0 257 aa12.45□□□□□ -0.42
ATF1-202ENST00000549612 BTF3L4Q96K17 158 aa12.45□□□□□ -0.42
ATF1-202ENST00000549612 OXTP01178 125 aa12.44□□□□□ -0.42
ATF1-202ENST00000549612 RPL23P62829 140 aaKnown RBP12.44□□□□□ -0.42
ATF1-202ENST00000549612 FOXI1Q12951 378 aa12.44□□□□□ -0.42
ATF1-202ENST00000549612 MRPL52Q86TS9 123 aaKnown RBP12.44□□□□□ -0.42
ATF1-202ENST00000549612 SPACA4Q8TDM5 124 aa12.44□□□□□ -0.42
ATF1-202ENST00000549612 GVQW2A0A096LPI5 108 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms