RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 Q0VG73 95 aa10.43□□□□□ -0.74
DDX54-205ENST00000548786 COTL1Q14019 142 aa10.43□□□□□ -0.74
DDX54-205ENST00000548786 NUP35Q8NFH5 326 aa10.43□□□□□ -0.74
DDX54-205ENST00000548786 C1orf43Q9BWL3 253 aa10.43□□□□□ -0.74
DDX54-205ENST00000548786 KRTAP4-5Q9BYR2 181 aa10.43□□□□□ -0.74
DDX54-205ENST00000548786 COX11Q9Y6N1 276 aa10.43□□□□□ -0.74
DDX54-205ENST00000548786 HLA-DQA1P01909 254 aa10.42□□□□□ -0.74
DDX54-205ENST00000548786 FAM231BA6NCW3 169 aa10.41□□□□□ -0.74
DDX54-205ENST00000548786 UBE2L6O14933 153 aa10.41□□□□□ -0.74
DDX54-205ENST00000548786 RAB14P61106 215 aa10.41□□□□□ -0.74
DDX54-205ENST00000548786 AMN1Q8IY45 258 aa10.41□□□□□ -0.74
DDX54-205ENST00000548786 NTN5Q8WTR8 489 aaPredicted RBP10.41□□□□□ -0.74
DDX54-205ENST00000548786 SMDT1Q9H4I9 107 aa10.41□□□□□ -0.74
DDX54-205ENST00000548786 IGLV4-60A0A075B6I1 120 aa10.4□□□□□ -0.74
DDX54-205ENST00000548786 IGLV10-54A0A075B6I4 117 aa10.4□□□□□ -0.74
DDX54-205ENST00000548786 SDHAF1A6NFY7 115 aa10.4□□□□□ -0.74
DDX54-205ENST00000548786 SMKR1H3BMG3 65 aa10.4□□□□□ -0.74
DDX54-205ENST00000548786 NCR2O95944 276 aa10.4□□□□□ -0.74
DDX54-205ENST00000548786 RIGQ13278 110 aa10.4□□□□□ -0.74
DDX54-205ENST00000548786 LINC01620Q4KN68 170 aa10.4□□□□□ -0.74
DDX54-205ENST00000548786 RNF185Q96GF1 192 aa10.4□□□□□ -0.74
DDX54-205ENST00000548786 TMEM191AQ9H0A3 160 aa10.4□□□□□ -0.74
DDX54-205ENST00000548786 NAT8BQ9UHF3 227 aa10.4□□□□□ -0.74
DDX54-205ENST00000548786 RPS10P46783 165 aaKnown RBP10.39□□□□□ -0.75
DDX54-205ENST00000548786 C20orf203Q8NBC4 194 aa10.39□□□□□ -0.75
DDX54-205ENST00000548786 FRZBQ92765 325 aa10.39□□□□□ -0.75
DDX54-205ENST00000548786 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.38□□□□□ -0.75
DDX54-205ENST00000548786 SMIM27A0A1W2PRY6 76 aa10.38□□□□□ -0.75
DDX54-205ENST00000548786 IGKV2-29A2NJV5 120 aaPredicted RBP10.38□□□□□ -0.75
DDX54-205ENST00000548786 RAB4AP20338 218 aa10.38□□□□□ -0.75
DDX54-205ENST00000548786 CAMPP49913 170 aa10.38□□□□□ -0.75
DDX54-205ENST00000548786 REG3AQ06141 175 aa10.38□□□□□ -0.75
DDX54-205ENST00000548786 MIAQ16674 131 aa10.38□□□□□ -0.75
DDX54-205ENST00000548786 IGKV3OR2-268A0A0C4DH90 116 aa10.37□□□□□ -0.75
DDX54-205ENST00000548786 APCSP02743 223 aa10.37□□□□□ -0.75
DDX54-205ENST00000548786 PMCHP20382 165 aa10.37□□□□□ -0.75
DDX54-205ENST00000548786 XGP55808 180 aa10.37□□□□□ -0.75
DDX54-205ENST00000548786 MRPL54Q6P161 138 aaKnown RBP10.37□□□□□ -0.75
DDX54-205ENST00000548786 ST20Q9HBF5 79 aa10.37□□□□□ -0.75
DDX54-205ENST00000548786 PRR34Q9NV39 138 aa10.37□□□□□ -0.75
DDX54-205ENST00000548786 TMEM242Q9NWH2 141 aa10.37□□□□□ -0.75
DDX54-205ENST00000548786 AMMECR1LQ6DCA0 310 aa10.36□□□□□ -0.75
DDX54-205ENST00000548786 DNAH8Q96JB1 4490 aa10.35□□□□□ -0.75
DDX54-205ENST00000548786 USP17L23D6RBM5 183 aa10.35□□□□□ -0.75
DDX54-205ENST00000548786 I3L3M4 83 aa10.35□□□□□ -0.75
DDX54-205ENST00000548786 IFITM2Q01629 132 aa10.35□□□□□ -0.75
DDX54-205ENST00000548786 RNASEKQ6P5S7 137 aaKnown RBP10.35□□□□□ -0.75
DDX54-205ENST00000548786 Q8N1X5 172 aa10.35□□□□□ -0.75
DDX54-205ENST00000548786 MRAP2Q96G30 205 aa10.35□□□□□ -0.75
DDX54-205ENST00000548786 TMEM70Q9BUB7 260 aa10.35□□□□□ -0.75
DDX54-205ENST00000548786 TRBV6-5A0A0K0K1A5 114 aa10.34□□□□□ -0.75
DDX54-205ENST00000548786 A0A1B0GUV1 79 aa10.34□□□□□ -0.75
DDX54-205ENST00000548786 TSHBP01222 138 aa10.34□□□□□ -0.75
DDX54-205ENST00000548786 SMR3BP02814 79 aaPredicted RBP10.34□□□□□ -0.75
DDX54-205ENST00000548786 FAM30AQ9NZY2 134 aa10.34□□□□□ -0.75
DDX54-205ENST00000548786 MRPL51Q4U2R6 128 aaKnown RBP10.33□□□□□ -0.76
DDX54-205ENST00000548786 CLLU1Q5K131 121 aa10.33□□□□□ -0.76
DDX54-205ENST00000548786 KRTAP26-1Q6PEX3 210 aa10.33□□□□□ -0.76
DDX54-205ENST00000548786 FAT1Q14517 4588 aa10.32□□□□□ -0.76
DDX54-205ENST00000548786 FGF6P10767 208 aa10.32□□□□□ -0.76
DDX54-205ENST00000548786 FAM104BQ5XKR9 115 aa10.32□□□□□ -0.76
DDX54-205ENST00000548786 HBBP68871 147 aa10.31□□□□□ -0.76
DDX54-205ENST00000548786 NRACQ8N912 160 aa10.31□□□□□ -0.76
DDX54-205ENST00000548786 PRSS1P07477 247 aa10.3□□□□□ -0.76
DDX54-205ENST00000548786 POLR2KP53803 58 aaKnown RBP10.3□□□□□ -0.76
DDX54-205ENST00000548786 C14orf177Q52M58 125 aa10.3□□□□□ -0.76
DDX54-205ENST00000548786 A0A1B0GW15 77 aa10.29□□□□□ -0.76
DDX54-205ENST00000548786 FCER1GP30273 86 aa10.29□□□□□ -0.76
DDX54-205ENST00000548786 CKS2P33552 79 aa10.29□□□□□ -0.76
DDX54-205ENST00000548786 SUMO2P61956 95 aaKnown RBP10.29□□□□□ -0.76
DDX54-205ENST00000548786 TRAV8-4A0A0B4J246 113 aa10.28□□□□□ -0.76
DDX54-205ENST00000548786 TRBV27A0A0K0K1C4 114 aa10.28□□□□□ -0.76
DDX54-205ENST00000548786 A0A1B0GXF2 115 aa10.28□□□□□ -0.76
DDX54-205ENST00000548786 GAGE12HA6NDE8 117 aa10.28□□□□□ -0.76
DDX54-205ENST00000548786 EPM2AB3EWF7 344 aa10.28□□□□□ -0.76
DDX54-205ENST00000548786 PPP1R2P9O14990 202 aa10.28□□□□□ -0.76
DDX54-205ENST00000548786 BTF3L4Q96K17 158 aa10.28□□□□□ -0.76
DDX54-205ENST00000548786 C7orf77A4D0Y5 90 aa10.27□□□□□ -0.77
DDX54-205ENST00000548786 D6R8Y8 96 aa10.27□□□□□ -0.77
DDX54-205ENST00000548786 F8W036 122 aa10.27□□□□□ -0.77
DDX54-205ENST00000548786 H7C423 109 aa10.27□□□□□ -0.77
DDX54-205ENST00000548786 VCYO14598 125 aa10.27□□□□□ -0.77
DDX54-205ENST00000548786 MT-ND4LP03901 98 aa10.27□□□□□ -0.77
DDX54-205ENST00000548786 S100A8P05109 93 aa10.27□□□□□ -0.77
DDX54-205ENST00000548786 ESDP10768 282 aa10.27□□□□□ -0.77
DDX54-205ENST00000548786 PNRC1Q12796 327 aaPredicted RBP10.27□□□□□ -0.77
DDX54-205ENST00000548786 Q5VSD8 79 aa10.27□□□□□ -0.77
DDX54-205ENST00000548786 OR5A1Q8NGJ0 315 aa10.27□□□□□ -0.77
DDX54-205ENST00000548786 TMEM101Q96IK0 257 aa10.27□□□□□ -0.77
DDX54-205ENST00000548786 hDV102S1A0JD36 115 aa10.26□□□□□ -0.77
DDX54-205ENST00000548786 PPP1R17O96001 155 aa10.26□□□□□ -0.77
DDX54-205ENST00000548786 CHCHD10Q8WYQ3 142 aaPredicted RBP10.26□□□□□ -0.77
DDX54-205ENST00000548786 TNFRSF6BO95407 300 aa10.25□□□□□ -0.77
DDX54-205ENST00000548786 NPYP01303 97 aa10.25□□□□□ -0.77
DDX54-205ENST00000548786 ZNF25P17030 456 aaPredicted RBP10.25□□□□□ -0.77
DDX54-205ENST00000548786 ADCYAP1P18509 176 aa10.25□□□□□ -0.77
DDX54-205ENST00000548786 KIR2DL4Q99706 377 aa10.25□□□□□ -0.77
DDX54-205ENST00000548786 LINC00862A6NCI5 91 aa10.24□□□□□ -0.77
DDX54-205ENST00000548786 XCL1P47992 114 aa10.24□□□□□ -0.77
DDX54-205ENST00000548786 RNASE13Q5GAN3 156 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms