RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 TRGC1P0CF51 173 aa7.99□□□□□ -1.13
GCN1-204ENST00000548132 FOXA3P55318 350 aaPredicted RBP7.99□□□□□ -1.13
GCN1-204ENST00000548132 ALKAL2Q6UX46 152 aa7.99□□□□□ -1.13
GCN1-204ENST00000548132 OCC1Q8TAD7 63 aa7.99□□□□□ -1.13
GCN1-204ENST00000548132 RPL39LQ96EH5 51 aaKnown RBP7.99□□□□□ -1.13
GCN1-204ENST00000548132 DAZAP1Q96EP5 407 aaKnown RBP7.99□□□□□ -1.13
GCN1-204ENST00000548132 TMEM243Q9BU79 118 aa7.99□□□□□ -1.13
GCN1-204ENST00000548132 A0A1B0GUV1 79 aa7.98□□□□□ -1.13
GCN1-204ENST00000548132 SLPIP03973 132 aa7.98□□□□□ -1.13
GCN1-204ENST00000548132 CIRBPQ14011 172 aaKnown RBP7.98□□□□□ -1.13
GCN1-204ENST00000548132 WDR73Q6P4I2 378 aa7.98□□□□□ -1.13
GCN1-204ENST00000548132 C9orf163Q8N9P6 203 aa7.98□□□□□ -1.13
GCN1-204ENST00000548132 NIT2Q9NQR4 276 aa7.98□□□□□ -1.13
GCN1-204ENST00000548132 XKRY2A2RUG3 117 aa7.97□□□□□ -1.13
GCN1-204ENST00000548132 GAS8-AS1O95177 125 aa7.97□□□□□ -1.13
GCN1-204ENST00000548132 CNBPP62633 177 aaKnown RBP7.97□□□□□ -1.13
GCN1-204ENST00000548132 C15orf56Q8N910 161 aa7.97□□□□□ -1.13
GCN1-204ENST00000548132 TNXBP22105 4242 aa7.97□□□□□ -1.13
GCN1-204ENST00000548132 hCG_2014768A0A024R1R8 64 aa7.96□□□□□ -1.14
GCN1-204ENST00000548132 TMEM250H0YL14 139 aa7.96□□□□□ -1.14
GCN1-204ENST00000548132 TAGLN2P37802 199 aaKnown RBP7.96□□□□□ -1.14
GCN1-204ENST00000548132 FAM231DQ6ZW35 169 aa7.96□□□□□ -1.14
GCN1-204ENST00000548132 AKAP14Q86UN6 197 aa7.96□□□□□ -1.14
GCN1-204ENST00000548132 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.96□□□□□ -1.14
GCN1-204ENST00000548132 BIN3Q9NQY0 253 aa7.96□□□□□ -1.14
GCN1-204ENST00000548132 AMTP48728 403 aa7.95□□□□□ -1.14
GCN1-204ENST00000548132 SDIM1Q6ZPB5 146 aa7.95□□□□□ -1.14
GCN1-204ENST00000548132 CHTF8P0CG12 524 aa7.94□□□□□ -1.14
GCN1-204ENST00000548132 COTL1Q14019 142 aa7.94□□□□□ -1.14
GCN1-204ENST00000548132 TWIST1Q15672 202 aa7.94□□□□□ -1.14
GCN1-204ENST00000548132 DGAT2L7PQ6IED9 249 aa7.94□□□□□ -1.14
GCN1-204ENST00000548132 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.93□□□□□ -1.14
GCN1-204ENST00000548132 TRAV8-4A0A0B4J246 113 aa7.93□□□□□ -1.14
GCN1-204ENST00000548132 IGKV2-29A2NJV5 120 aaPredicted RBP7.93□□□□□ -1.14
GCN1-204ENST00000548132 J3QL48 77 aa7.93□□□□□ -1.14
GCN1-204ENST00000548132 CT83Q5H943 113 aa7.93□□□□□ -1.14
GCN1-204ENST00000548132 UBR4Q5T4S7 5183 aa7.92□□□□□ -1.14
GCN1-204ENST00000548132 hDV102S1A0JD36 115 aa7.92□□□□□ -1.14
GCN1-204ENST00000548132 FAM231BA6NCW3 169 aa7.92□□□□□ -1.14
GCN1-204ENST00000548132 SDHAF1A6NFY7 115 aa7.92□□□□□ -1.14
GCN1-204ENST00000548132 RPL37AP61513 92 aaKnown RBP7.92□□□□□ -1.14
GCN1-204ENST00000548132 LINC01551Q86U37 167 aa7.92□□□□□ -1.14
GCN1-204ENST00000548132 SPACA4Q8TDM5 124 aa7.92□□□□□ -1.14
GCN1-204ENST00000548132 RNF185Q96GF1 192 aa7.92□□□□□ -1.14
GCN1-204ENST00000548132 TRBV6-5A0A0K0K1A5 114 aa7.91□□□□□ -1.14
GCN1-204ENST00000548132 A0A1B0GVG6 124 aa7.91□□□□□ -1.14
GCN1-204ENST00000548132 GATCO43716 136 aaKnown RBP7.91□□□□□ -1.14
GCN1-204ENST00000548132 TSHBP01222 138 aa7.91□□□□□ -1.14
GCN1-204ENST00000548132 RPS10P46783 165 aaKnown RBP7.91□□□□□ -1.14
GCN1-204ENST00000548132 CLRN3Q8NCR9 226 aa7.91□□□□□ -1.14
GCN1-204ENST00000548132 GAGE12HA6NDE8 117 aa7.9□□□□□ -1.14
GCN1-204ENST00000548132 NCR2O95944 276 aa7.9□□□□□ -1.14
GCN1-204ENST00000548132 SRP19P09132 144 aaKnown RBP7.9□□□□□ -1.14
GCN1-204ENST00000548132 BLOC1S1P78537 153 aa7.9□□□□□ -1.14
GCN1-204ENST00000548132 FAM210AQ96ND0 272 aa7.9□□□□□ -1.14
GCN1-204ENST00000548132 SMIM7Q9BQ49 75 aa7.9□□□□□ -1.14
GCN1-204ENST00000548132 GVQW2A0A096LPI5 108 aaPredicted RBP7.89□□□□□ -1.15
GCN1-204ENST00000548132 UBE2L6O14933 153 aa7.89□□□□□ -1.15
GCN1-204ENST00000548132 NDUFS6O75380 124 aaKnown RBP7.89□□□□□ -1.15
GCN1-204ENST00000548132 APCSP02743 223 aa7.89□□□□□ -1.15
GCN1-204ENST00000548132 MT1HL1P0DM35 61 aa7.89□□□□□ -1.15
GCN1-204ENST00000548132 FGF6P10767 208 aa7.89□□□□□ -1.15
GCN1-204ENST00000548132 ESDP10768 282 aa7.89□□□□□ -1.15
GCN1-204ENST00000548132 FOXI1Q12951 378 aa7.89□□□□□ -1.15
GCN1-204ENST00000548132 TMEM242Q9NWH2 141 aa7.89□□□□□ -1.15
GCN1-204ENST00000548132 IGKV3OR2-268A0A0C4DH90 116 aa7.88□□□□□ -1.15
GCN1-204ENST00000548132 HIGD1CA8MV81 97 aa7.88□□□□□ -1.15
GCN1-204ENST00000548132 A8MWL6 223 aa7.88□□□□□ -1.15
GCN1-204ENST00000548132 CEBPGP53567 150 aa7.88□□□□□ -1.15
GCN1-204ENST00000548132 HIGD2BQ4VC39 106 aa7.88□□□□□ -1.15
GCN1-204ENST00000548132 TSKUQ8WUA8 353 aa7.88□□□□□ -1.15
GCN1-204ENST00000548132 CHCHD10Q8WYQ3 142 aaPredicted RBP7.88□□□□□ -1.15
GCN1-204ENST00000548132 V9GYV3 84 aa7.88□□□□□ -1.15
GCN1-204ENST00000548132 IGHV3-64A0A075B6Q5 118 aa7.87□□□□□ -1.15
GCN1-204ENST00000548132 A0A087WYN8 130 aa7.87□□□□□ -1.15
GCN1-204ENST00000548132 C9JQL5 133 aa7.87□□□□□ -1.15
GCN1-204ENST00000548132 OXTP01178 125 aa7.87□□□□□ -1.15
GCN1-204ENST00000548132 POLR2KP53803 58 aaKnown RBP7.87□□□□□ -1.15
GCN1-204ENST00000548132 TMEM191AQ9H0A3 160 aa7.87□□□□□ -1.15
GCN1-204ENST00000548132 OSTCQ9NRP0 149 aa7.87□□□□□ -1.15
GCN1-204ENST00000548132 A0A1B0GUT8 65 aa7.86□□□□□ -1.15
GCN1-204ENST00000548132 SMKR1H3BMG3 65 aa7.86□□□□□ -1.15
GCN1-204ENST00000548132 H7C423 109 aa7.86□□□□□ -1.15
GCN1-204ENST00000548132 AMN1Q8IY45 258 aa7.86□□□□□ -1.15
GCN1-204ENST00000548132 NRACQ8N912 160 aa7.86□□□□□ -1.15
GCN1-204ENST00000548132 ISOC2Q96AB3 205 aa7.86□□□□□ -1.15
GCN1-204ENST00000548132 PLAC8Q9NZF1 115 aa7.86□□□□□ -1.15
GCN1-204ENST00000548132 TRBV27A0A0K0K1C4 114 aa7.85□□□□□ -1.15
GCN1-204ENST00000548132 I3L3M4 83 aa7.85□□□□□ -1.15
GCN1-204ENST00000548132 ZNF25P17030 456 aaPredicted RBP7.85□□□□□ -1.15
GCN1-204ENST00000548132 RAB4AP20338 218 aa7.85□□□□□ -1.15
GCN1-204ENST00000548132 RNASEKQ6P5S7 137 aaKnown RBP7.85□□□□□ -1.15
GCN1-204ENST00000548132 TEX261Q6UWH6 196 aa7.85□□□□□ -1.15
GCN1-204ENST00000548132 MRPL52Q86TS9 123 aaKnown RBP7.85□□□□□ -1.15
GCN1-204ENST00000548132 OR5A1Q8NGJ0 315 aa7.85□□□□□ -1.15
GCN1-204ENST00000548132 PRSS3P2Q8NHM4 247 aa7.85□□□□□ -1.15
GCN1-204ENST00000548132 A0A096LNI7 61 aa7.84□□□□□ -1.15
GCN1-204ENST00000548132 ZNF727A8MUV8 499 aa7.84□□□□□ -1.15
GCN1-204ENST00000548132 RPL23P62829 140 aaKnown RBP7.84□□□□□ -1.15
GCN1-204ENST00000548132 SRSF3P84103 164 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms