RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 GATD1Q8NB37 220 aa13.81□□□□□ -0.2
USP44-204ENST00000547951 GTSF1Q8WW33 167 aa13.81□□□□□ -0.2
USP44-204ENST00000547951 CNFNQ9BYD5 112 aa13.81□□□□□ -0.2
USP44-204ENST00000547951 hCG_2014768A0A024R1R8 64 aa13.79□□□□□ -0.2
USP44-204ENST00000547951 WDR73Q6P4I2 378 aa13.79□□□□□ -0.2
USP44-204ENST00000547951 ALKAL2Q6UX46 152 aa13.79□□□□□ -0.2
USP44-204ENST00000547951 PGLYRP4Q96LB8 373 aa13.79□□□□□ -0.2
USP44-204ENST00000547951 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.79□□□□□ -0.2
USP44-204ENST00000547951 KRTAP29-1A8MX34 341 aaPredicted RBP13.78□□□□□ -0.2
USP44-204ENST00000547951 C9orf163Q8N9P6 203 aa13.78□□□□□ -0.2
USP44-204ENST00000547951 RPL39LQ96EH5 51 aaKnown RBP13.78□□□□□ -0.2
USP44-204ENST00000547951 PKHD1L1Q86WI1 4243 aa13.78□□□□□ -0.2
USP44-204ENST00000547951 A0A1B0GUV1 79 aa13.77□□□□□ -0.21
USP44-204ENST00000547951 TAGLN2P37802 199 aaKnown RBP13.77□□□□□ -0.21
USP44-204ENST00000547951 AMTP48728 403 aa13.77□□□□□ -0.21
USP44-204ENST00000547951 DGAT2L7PQ6IED9 249 aa13.77□□□□□ -0.21
USP44-204ENST00000547951 FAT3Q8TDW7 4589 aa13.76□□□□□ -0.21
USP44-204ENST00000547951 COTL1Q14019 142 aa13.76□□□□□ -0.21
USP44-204ENST00000547951 AKAP14Q86UN6 197 aa13.76□□□□□ -0.21
USP44-204ENST00000547951 SLPIP03973 132 aa13.75□□□□□ -0.21
USP44-204ENST00000547951 SDIM1Q6ZPB5 146 aa13.75□□□□□ -0.21
USP44-204ENST00000547951 hDV102S1A0JD36 115 aa13.74□□□□□ -0.21
USP44-204ENST00000547951 TRAV8-4A0A0B4J246 113 aa13.73□□□□□ -0.21
USP44-204ENST00000547951 UBE2L6O14933 153 aa13.73□□□□□ -0.21
USP44-204ENST00000547951 HNRNPA3P51991 378 aaKnown RBP13.73□□□□□ -0.21
USP44-204ENST00000547951 GATCO43716 136 aaKnown RBP13.72□□□□□ -0.21
USP44-204ENST00000547951 CEBPGP53567 150 aa13.72□□□□□ -0.21
USP44-204ENST00000547951 LYPD6BQ8NI32 183 aa13.72□□□□□ -0.21
USP44-204ENST00000547951 IGKV3OR2-268A0A0C4DH90 116 aa13.71□□□□□ -0.21
USP44-204ENST00000547951 TMEM250H0YL14 139 aa13.71□□□□□ -0.21
USP44-204ENST00000547951 GAS8-AS1O95177 125 aa13.71□□□□□ -0.21
USP44-204ENST00000547951 CNBPP62633 177 aaKnown RBP13.71□□□□□ -0.21
USP44-204ENST00000547951 CLRN3Q8NCR9 226 aa13.71□□□□□ -0.21
USP44-204ENST00000547951 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.7□□□□□ -0.22
USP44-204ENST00000547951 IGKV2-29A2NJV5 120 aaPredicted RBP13.7□□□□□ -0.22
USP44-204ENST00000547951 RPL37AP61513 92 aaKnown RBP13.7□□□□□ -0.22
USP44-204ENST00000547951 BLOC1S1P78537 153 aa13.7□□□□□ -0.22
USP44-204ENST00000547951 FAM231DQ6ZW35 169 aa13.69□□□□□ -0.22
USP44-204ENST00000547951 C15orf56Q8N910 161 aa13.69□□□□□ -0.22
USP44-204ENST00000547951 GAGE12HA6NDE8 117 aa13.68□□□□□ -0.22
USP44-204ENST00000547951 CHTF8P0CG12 524 aa13.68□□□□□ -0.22
USP44-204ENST00000547951 SDHAF1A6NFY7 115 aa13.67□□□□□ -0.22
USP44-204ENST00000547951 A8MWL6 223 aa13.66□□□□□ -0.22
USP44-204ENST00000547951 SMIM15Q7Z3B0 74 aa13.66□□□□□ -0.22
USP44-204ENST00000547951 FAM231BA6NCW3 169 aa13.65□□□□□ -0.22
USP44-204ENST00000547951 CIRBPQ14011 172 aaKnown RBP13.65□□□□□ -0.22
USP44-204ENST00000547951 RNASEKQ6P5S7 137 aaKnown RBP13.65□□□□□ -0.22
USP44-204ENST00000547951 SMIM7Q9BQ49 75 aa13.65□□□□□ -0.22
USP44-204ENST00000547951 NCR2O95944 276 aa13.64□□□□□ -0.23
USP44-204ENST00000547951 APCSP02743 223 aa13.64□□□□□ -0.23
USP44-204ENST00000547951 FGF6P10767 208 aa13.64□□□□□ -0.23
USP44-204ENST00000547951 HIGD2BQ4VC39 106 aa13.64□□□□□ -0.23
USP44-204ENST00000547951 AMMECR1LQ6DCA0 310 aa13.64□□□□□ -0.23
USP44-204ENST00000547951 LINC01551Q86U37 167 aa13.64□□□□□ -0.23
USP44-204ENST00000547951 IGHV3-64A0A075B6Q5 118 aa13.63□□□□□ -0.23
USP44-204ENST00000547951 CT83Q5H943 113 aa13.63□□□□□ -0.23
USP44-204ENST00000547951 CHCHD10Q8WYQ3 142 aaPredicted RBP13.63□□□□□ -0.23
USP44-204ENST00000547951 EIF5A2Q9GZV4 153 aaKnown RBP13.63□□□□□ -0.23
USP44-204ENST00000547951 AP5S1Q9NUS5 200 aa13.63□□□□□ -0.23
USP44-204ENST00000547951 TSHBP01222 138 aa13.62□□□□□ -0.23
USP44-204ENST00000547951 RPS10P46783 165 aaKnown RBP13.62□□□□□ -0.23
USP44-204ENST00000547951 TEX261Q6UWH6 196 aa13.62□□□□□ -0.23
USP44-204ENST00000547951 RNF185Q96GF1 192 aa13.62□□□□□ -0.23
USP44-204ENST00000547951 TRBV6-5A0A0K0K1A5 114 aa13.61□□□□□ -0.23
USP44-204ENST00000547951 HIGD1CA8MV81 97 aa13.61□□□□□ -0.23
USP44-204ENST00000547951 OXTP01178 125 aa13.61□□□□□ -0.23
USP44-204ENST00000547951 SRP19P09132 144 aaKnown RBP13.61□□□□□ -0.23
USP44-204ENST00000547951 PMCHP20382 165 aa13.61□□□□□ -0.23
USP44-204ENST00000547951 FAM210AQ96ND0 272 aa13.61□□□□□ -0.23
USP44-204ENST00000547951 TMEM242Q9NWH2 141 aa13.61□□□□□ -0.23
USP44-204ENST00000547951 A0A087WYN8 130 aa13.6□□□□□ -0.23
USP44-204ENST00000547951 A0A1B0GVG6 124 aa13.6□□□□□ -0.23
USP44-204ENST00000547951 I3L3M4 83 aa13.6□□□□□ -0.23
USP44-204ENST00000547951 SPACA4Q8TDM5 124 aa13.6□□□□□ -0.23
USP44-204ENST00000547951 TSKUQ8WUA8 353 aa13.6□□□□□ -0.23
USP44-204ENST00000547951 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.59□□□□□ -0.23
USP44-204ENST00000547951 A0A1B0GUT8 65 aa13.59□□□□□ -0.23
USP44-204ENST00000547951 ZNF727A8MUV8 499 aa13.59□□□□□ -0.23
USP44-204ENST00000547951 H7C423 109 aa13.59□□□□□ -0.23
USP44-204ENST00000547951 FOXI1Q12951 378 aa13.59□□□□□ -0.23
USP44-204ENST00000547951 SMKR1H3BMG3 65 aa13.58□□□□□ -0.24
USP44-204ENST00000547951 ESDP10768 282 aa13.58□□□□□ -0.24
USP44-204ENST00000547951 AMN1Q8IY45 258 aa13.58□□□□□ -0.24
USP44-204ENST00000547951 DPH3Q96FX2 82 aa13.58□□□□□ -0.24
USP44-204ENST00000547951 TMEM191AQ9H0A3 160 aa13.58□□□□□ -0.24
USP44-204ENST00000547951 OSTCQ9NRP0 149 aa13.58□□□□□ -0.24
USP44-204ENST00000547951 RAB4AP20338 218 aa13.57□□□□□ -0.24
USP44-204ENST00000547951 COX6A2Q02221 97 aa13.57□□□□□ -0.24
USP44-204ENST00000547951 BORCS7Q96B45 105 aa13.57□□□□□ -0.24
USP44-204ENST00000547951 ST20Q9HBF5 79 aa13.57□□□□□ -0.24
USP44-204ENST00000547951 V9GYV3 84 aa13.57□□□□□ -0.24
USP44-204ENST00000547951 XCL1P47992 114 aa13.56□□□□□ -0.24
USP44-204ENST00000547951 POLR2KP53803 58 aaKnown RBP13.56□□□□□ -0.24
USP44-204ENST00000547951 CFAP161Q6P656 301 aa13.56□□□□□ -0.24
USP44-204ENST00000547951 OR5A1Q8NGJ0 315 aa13.56□□□□□ -0.24
USP44-204ENST00000547951 PRSS3P2Q8NHM4 247 aa13.56□□□□□ -0.24
USP44-204ENST00000547951 HMCN2Q8NDA2 5059 aa13.56□□□□□ -0.24
USP44-204ENST00000547951 GVQW2A0A096LPI5 108 aaPredicted RBP13.55□□□□□ -0.24
USP44-204ENST00000547951 C9JQL5 133 aa13.55□□□□□ -0.24
USP44-204ENST00000547951 LINC00526Q96FQ7 95 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms