RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 CHCHD5Q9BSY4 110 aa15.77■□□□□ 0.11
SMARCD1-203ENST00000547247 RPL32P62910 135 aaKnown RBP15.76■□□□□ 0.11
SMARCD1-203ENST00000547247 KIAA1644Q3SXP7 199 aa15.76■□□□□ 0.11
SMARCD1-203ENST00000547247 NIT1Q86X76 327 aa15.76■□□□□ 0.11
SMARCD1-203ENST00000547247 MRPL18Q9H0U6 180 aaKnown RBP15.76■□□□□ 0.11
SMARCD1-203ENST00000547247 TRAV9-2A0A087WT02 112 aa15.75■□□□□ 0.11
SMARCD1-203ENST00000547247 AMTP48728 403 aa15.75■□□□□ 0.11
SMARCD1-203ENST00000547247 Q6ZR54 194 aa15.75■□□□□ 0.11
SMARCD1-203ENST00000547247 TMEM243Q9BU79 118 aa15.75■□□□□ 0.11
SMARCD1-203ENST00000547247 K7EP13 123 aa15.75■□□□□ 0.11
SMARCD1-203ENST00000547247 FABP9Q0Z7S8 132 aa15.75■□□□□ 0.11
SMARCD1-203ENST00000547247 KIR2DL4Q99706 377 aa15.75■□□□□ 0.11
SMARCD1-203ENST00000547247 TRAPPC1Q9Y5R8 145 aa15.75■□□□□ 0.11
SMARCD1-203ENST00000547247 TMEM262E9PQX1 116 aa15.74■□□□□ 0.11
SMARCD1-203ENST00000547247 SMIM2Q9BVW6 85 aa15.74■□□□□ 0.11
SMARCD1-203ENST00000547247 A0A087WX48 190 aa15.73■□□□□ 0.11
SMARCD1-203ENST00000547247 ATP6V1G1O75348 118 aa15.73■□□□□ 0.11
SMARCD1-203ENST00000547247 TSHBP01222 138 aa15.73■□□□□ 0.11
SMARCD1-203ENST00000547247 IGHV3-30P01768 117 aa15.73■□□□□ 0.11
SMARCD1-203ENST00000547247 IGHV3-33P01772 117 aa15.73■□□□□ 0.11
SMARCD1-203ENST00000547247 IGHV3-30-3P0DP02 117 aa15.73■□□□□ 0.11
SMARCD1-203ENST00000547247 IGHV3-30-5P0DP03 117 aa15.73■□□□□ 0.11
SMARCD1-203ENST00000547247 S100A1P23297 94 aa15.73■□□□□ 0.11
SMARCD1-203ENST00000547247 PKIAP61925 76 aa15.73■□□□□ 0.11
SMARCD1-203ENST00000547247 MAP1LC3AQ9H492 121 aa15.73■□□□□ 0.11
SMARCD1-203ENST00000547247 FCER1GP30273 86 aa15.72■□□□□ 0.11
SMARCD1-203ENST00000547247 C10orf126Q8N4M7 172 aa15.72■□□□□ 0.11
SMARCD1-203ENST00000547247 CHCHD7Q9BUK0 85 aa15.72■□□□□ 0.11
SMARCD1-203ENST00000547247 KRTAP1-5Q9BYS1 174 aa15.72■□□□□ 0.11
SMARCD1-203ENST00000547247 PRSS47A8MTI9 375 aa15.71■□□□□ 0.11
SMARCD1-203ENST00000547247 Q8N3U1 123 aa15.71■□□□□ 0.11
SMARCD1-203ENST00000547247 GAGE6Q13070 117 aa15.7■□□□□ 0.1
SMARCD1-203ENST00000547247 LOC389332A0A1B0GUA5 103 aa15.7■□□□□ 0.1
SMARCD1-203ENST00000547247 UBE2L6O14933 153 aa15.7■□□□□ 0.1
SMARCD1-203ENST00000547247 TCAPO15273 167 aa15.7■□□□□ 0.1
SMARCD1-203ENST00000547247 SCO1O75880 301 aa15.7■□□□□ 0.1
SMARCD1-203ENST00000547247 ALKBH7Q9BT30 221 aaPredicted RBP15.69■□□□□ 0.1
SMARCD1-203ENST00000547247 ESDP10768 282 aa15.68■□□□□ 0.1
SMARCD1-203ENST00000547247 MPV17L2Q567V2 206 aa15.68■□□□□ 0.1
SMARCD1-203ENST00000547247 H7C423 109 aa15.66■□□□□ 0.1
SMARCD1-203ENST00000547247 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.66■□□□□ 0.1
SMARCD1-203ENST00000547247 IGKV2-29A2NJV5 120 aaPredicted RBP15.66■□□□□ 0.1
SMARCD1-203ENST00000547247 IBA57-AS1B1ANH7 110 aa15.66■□□□□ 0.1
SMARCD1-203ENST00000547247 RAB5AP20339 215 aa15.66■□□□□ 0.1
SMARCD1-203ENST00000547247 Q8N8P6 123 aa15.66■□□□□ 0.1
SMARCD1-203ENST00000547247 COLCA2A8K830 154 aa15.65■□□□□ 0.1
SMARCD1-203ENST00000547247 RBX1P62877 108 aa15.65■□□□□ 0.1
SMARCD1-203ENST00000547247 C1orf134Q5TEV5 83 aa15.65■□□□□ 0.1
SMARCD1-203ENST00000547247 Q8N976 141 aa15.65■□□□□ 0.1
SMARCD1-203ENST00000547247 NXT2Q9NPJ8 142 aaKnown RBP15.65■□□□□ 0.1
SMARCD1-203ENST00000547247 A0A1B0GUV1 79 aa15.64■□□□□ 0.09
SMARCD1-203ENST00000547247 BTF3P20290 206 aaKnown RBP15.64■□□□□ 0.09
SMARCD1-203ENST00000547247 C6orf223Q8N319 242 aa15.64■□□□□ 0.09
SMARCD1-203ENST00000547247 KLK12Q9UKR0 248 aa15.64■□□□□ 0.09
SMARCD1-203ENST00000547247 LAGE3Q14657 143 aa15.62■□□□□ 0.09
SMARCD1-203ENST00000547247 AMMECR1LQ6DCA0 310 aa15.62■□□□□ 0.09
SMARCD1-203ENST00000547247 ANGP03950 147 aaKnown RBP15.62■□□□□ 0.09
SMARCD1-203ENST00000547247 IFI27P40305 119 aaPredicted RBP15.62■□□□□ 0.09
SMARCD1-203ENST00000547247 K7EMI3 77 aa15.61■□□□□ 0.09
SMARCD1-203ENST00000547247 FGF6P10767 208 aa15.61■□□□□ 0.09
SMARCD1-203ENST00000547247 RNASEKQ6P5S7 137 aaKnown RBP15.61■□□□□ 0.09
SMARCD1-203ENST00000547247 C20orf203Q8NBC4 194 aa15.61■□□□□ 0.09
SMARCD1-203ENST00000547247 PRSS3P2Q8NHM4 247 aa15.61■□□□□ 0.09
SMARCD1-203ENST00000547247 TMEM18Q96B42 140 aa15.61■□□□□ 0.09
SMARCD1-203ENST00000547247 DNAH2Q9P225 4427 aa15.6■□□□□ 0.09
SMARCD1-203ENST00000547247 IGLV4-60A0A075B6I1 120 aa15.59■□□□□ 0.09
SMARCD1-203ENST00000547247 ZNF25P17030 456 aaPredicted RBP15.59■□□□□ 0.09
SMARCD1-203ENST00000547247 TRAV8-3A0A0A6YYJ7 113 aa15.58■□□□□ 0.09
SMARCD1-203ENST00000547247 TRGC2P03986 189 aa15.58■□□□□ 0.09
SMARCD1-203ENST00000547247 SMAGPQ0VAQ4 97 aa15.58■□□□□ 0.09
SMARCD1-203ENST00000547247 NFE4Q86UQ8 179 aa15.58■□□□□ 0.09
SMARCD1-203ENST00000547247 UBE2WQ96B02 151 aa15.58■□□□□ 0.09
SMARCD1-203ENST00000547247 Q9HAA7 133 aa15.58■□□□□ 0.09
SMARCD1-203ENST00000547247 ORMDL2Q53FV1 153 aa15.58■□□□□ 0.08
SMARCD1-203ENST00000547247 MRPL52Q86TS9 123 aaKnown RBP15.58■□□□□ 0.08
SMARCD1-203ENST00000547247 C18orf32Q8TCD1 76 aa15.58■□□□□ 0.08
SMARCD1-203ENST00000547247 CRPP02741 224 aa15.57■□□□□ 0.08
SMARCD1-203ENST00000547247 TMEM101Q96IK0 257 aa15.57■□□□□ 0.08
SMARCD1-203ENST00000547247 Q0VG73 95 aa15.56■□□□□ 0.08
SMARCD1-203ENST00000547247 LINC00269Q8N2A0 174 aa15.56■□□□□ 0.08
SMARCD1-203ENST00000547247 DNAH10Q8IVF4 4471 aa15.56■□□□□ 0.08
SMARCD1-203ENST00000547247 RTL8CO15255 209 aa15.55■□□□□ 0.08
SMARCD1-203ENST00000547247 RPL39P62891 51 aaKnown RBP15.55■□□□□ 0.08
SMARCD1-203ENST00000547247 DGAT2L7PQ6IED9 249 aa15.55■□□□□ 0.08
SMARCD1-203ENST00000547247 OR5A1Q8NGJ0 315 aa15.55■□□□□ 0.08
SMARCD1-203ENST00000547247 UBE2D4Q9Y2X8 147 aa15.55■□□□□ 0.08
SMARCD1-203ENST00000547247 ENHOQ6UWT2 76 aa15.54■□□□□ 0.08
SMARCD1-203ENST00000547247 FA2HQ7L5A8 372 aa15.54■□□□□ 0.08
SMARCD1-203ENST00000547247 PRR34Q9NV39 138 aa15.54■□□□□ 0.08
SMARCD1-203ENST00000547247 CLPSL2Q6UWE3 100 aa15.53■□□□□ 0.08
SMARCD1-203ENST00000547247 TIMM21Q9BVV7 248 aa15.53■□□□□ 0.08
SMARCD1-203ENST00000547247 CSDC2Q9Y534 153 aaKnown RBP15.53■□□□□ 0.08
SMARCD1-203ENST00000547247 REG3AQ06141 175 aa15.53■□□□□ 0.08
SMARCD1-203ENST00000547247 LINC01546A6NGU7 62 aa15.52■□□□□ 0.07
SMARCD1-203ENST00000547247 G0S2P27469 103 aa15.52■□□□□ 0.07
SMARCD1-203ENST00000547247 MIAQ16674 131 aa15.52■□□□□ 0.07
SMARCD1-203ENST00000547247 Q6ZRN7 208 aaPredicted RBP15.52■□□□□ 0.07
SMARCD1-203ENST00000547247 CYSLTR1Q9Y271 337 aa15.52■□□□□ 0.07
SMARCD1-203ENST00000547247 RMI2Q96E14 147 aa15.51■□□□□ 0.07
SMARCD1-203ENST00000547247 CDC42SE2Q9NRR3 84 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms