RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 IGHV3-38A0A0C4DH36 116 aa11□□□□□ -0.65
TRAFD1-203ENST00000547063 NDUFA6P56556 154 aa11□□□□□ -0.65
TRAFD1-203ENST00000547063 TIRAPP58753 221 aa11□□□□□ -0.65
TRAFD1-203ENST00000547063 COA6Q5JTJ3 125 aaKnown RBP11□□□□□ -0.65
TRAFD1-203ENST00000547063 MUC7Q8TAX7 377 aa11□□□□□ -0.65
TRAFD1-203ENST00000547063 LINC01549A6NIU2 74 aa10.99□□□□□ -0.65
TRAFD1-203ENST00000547063 HSBP1O75506 76 aa10.99□□□□□ -0.65
TRAFD1-203ENST00000547063 SERF1AO75920 110 aa10.99□□□□□ -0.65
TRAFD1-203ENST00000547063 TSHBP01222 138 aa10.99□□□□□ -0.65
TRAFD1-203ENST00000547063 TMEM18Q96B42 140 aa10.99□□□□□ -0.65
TRAFD1-203ENST00000547063 TRBV25-1A0A075B6N4 114 aa10.98□□□□□ -0.65
TRAFD1-203ENST00000547063 TRBV6-8A0A0A6YYG3 113 aa10.98□□□□□ -0.65
TRAFD1-203ENST00000547063 IGHV1-24A0A0C4DH33 117 aa10.98□□□□□ -0.65
TRAFD1-203ENST00000547063 AMTP48728 403 aa10.98□□□□□ -0.65
TRAFD1-203ENST00000547063 PRKDCP78527 4128 aaKnown RBP10.98□□□□□ -0.65
TRAFD1-203ENST00000547063 SMAGPQ0VAQ4 97 aa10.97□□□□□ -0.65
TRAFD1-203ENST00000547063 URB1-AS1Q96HZ7 61 aa10.97□□□□□ -0.65
TRAFD1-203ENST00000547063 HUWE1Q7Z6Z7 4374 aaKnown RBP10.97□□□□□ -0.65
TRAFD1-203ENST00000547063 DNAH9Q9NYC9 4486 aa10.97□□□□□ -0.65
TRAFD1-203ENST00000547063 ESDP10768 282 aa10.96□□□□□ -0.65
TRAFD1-203ENST00000547063 LELP1Q5T871 98 aa10.96□□□□□ -0.65
TRAFD1-203ENST00000547063 LYPD5Q6UWN5 251 aa10.96□□□□□ -0.65
TRAFD1-203ENST00000547063 TMEM243Q9BU79 118 aa10.96□□□□□ -0.65
TRAFD1-203ENST00000547063 H7C423 109 aa10.95□□□□□ -0.66
TRAFD1-203ENST00000547063 CCL18P55774 89 aa10.95□□□□□ -0.66
TRAFD1-203ENST00000547063 PKIAP61925 76 aa10.95□□□□□ -0.66
TRAFD1-203ENST00000547063 NTM-AS1Q6ZSK4 140 aa10.95□□□□□ -0.66
TRAFD1-203ENST00000547063 APLNQ9ULZ1 77 aa10.95□□□□□ -0.66
TRAFD1-203ENST00000547063 TMA7Q9Y2S6 64 aaKnown RBP10.95□□□□□ -0.66
TRAFD1-203ENST00000547063 TRAV8-6A0A0B4J262 113 aa10.94□□□□□ -0.66
TRAFD1-203ENST00000547063 UBE2L6O14933 153 aa10.94□□□□□ -0.66
TRAFD1-203ENST00000547063 HBDP02042 147 aa10.94□□□□□ -0.66
TRAFD1-203ENST00000547063 C20orf203Q8NBC4 194 aa10.94□□□□□ -0.66
TRAFD1-203ENST00000547063 CYSLTR1Q9Y271 337 aa10.94□□□□□ -0.66
TRAFD1-203ENST00000547063 C3orf84H3BNL1 204 aa10.93□□□□□ -0.66
TRAFD1-203ENST00000547063 BTF3P20290 206 aaKnown RBP10.93□□□□□ -0.66
TRAFD1-203ENST00000547063 LINC00310P59036 64 aa10.93□□□□□ -0.66
TRAFD1-203ENST00000547063 ZFAND6Q6FIF0 208 aa10.93□□□□□ -0.66
TRAFD1-203ENST00000547063 DEFB104AQ8WTQ1 72 aa10.93□□□□□ -0.66
TRAFD1-203ENST00000547063 CHCHD5Q9BSY4 110 aa10.93□□□□□ -0.66
TRAFD1-203ENST00000547063 CHCHD7Q9BUK0 85 aa10.93□□□□□ -0.66
TRAFD1-203ENST00000547063 ESRGQ1W209 222 aa10.92□□□□□ -0.66
TRAFD1-203ENST00000547063 C2orf66Q6UXQ4 117 aa10.92□□□□□ -0.66
TRAFD1-203ENST00000547063 TGP01266 2768 aa10.91□□□□□ -0.66
TRAFD1-203ENST00000547063 TOMM6Q96B49 74 aa10.91□□□□□ -0.66
TRAFD1-203ENST00000547063 C5orf52A6NGY3 159 aa10.9□□□□□ -0.66
TRAFD1-203ENST00000547063 NUPR1O60356 82 aa10.9□□□□□ -0.66
TRAFD1-203ENST00000547063 ZNF25P17030 456 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-203ENST00000547063 S100A2P29034 98 aa10.9□□□□□ -0.66
TRAFD1-203ENST00000547063 SNRPEP62304 92 aaKnown RBP10.9□□□□□ -0.66
TRAFD1-203ENST00000547063 AMMECR1LQ6DCA0 310 aa10.9□□□□□ -0.66
TRAFD1-203ENST00000547063 FAM19A2Q8N3H0 131 aa10.9□□□□□ -0.66
TRAFD1-203ENST00000547063 PACRGQ96M98 296 aaPredicted RBP10.9□□□□□ -0.66
TRAFD1-203ENST00000547063 TIMM21Q9BVV7 248 aa10.9□□□□□ -0.66
TRAFD1-203ENST00000547063 SPANXA1Q9NS26 97 aa10.9□□□□□ -0.66
TRAFD1-203ENST00000547063 MRPS16Q9Y3D3 137 aaKnown RBP10.9□□□□□ -0.66
TRAFD1-203ENST00000547063 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-203ENST00000547063 IGKV2-29A2NJV5 120 aaPredicted RBP10.89□□□□□ -0.67
TRAFD1-203ENST00000547063 NPSP0C0P6 89 aa10.89□□□□□ -0.67
TRAFD1-203ENST00000547063 PMCHL1Q16048 86 aa10.89□□□□□ -0.67
TRAFD1-203ENST00000547063 MRPL52Q86TS9 123 aaKnown RBP10.89□□□□□ -0.67
TRAFD1-203ENST00000547063 PYGO1Q9Y3Y4 419 aa10.89□□□□□ -0.67
TRAFD1-203ENST00000547063 A0A096LNJ9 63 aa10.88□□□□□ -0.67
TRAFD1-203ENST00000547063 ATP5LO75964 103 aa10.88□□□□□ -0.67
TRAFD1-203ENST00000547063 LEPROTL1O95214 131 aa10.88□□□□□ -0.67
TRAFD1-203ENST00000547063 RPL39P62891 51 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-203ENST00000547063 PAPPA-AS1Q5QFB9 102 aa10.88□□□□□ -0.67
TRAFD1-203ENST00000547063 DGAT2L7PQ6IED9 249 aa10.88□□□□□ -0.67
TRAFD1-203ENST00000547063 ERASQ7Z444 233 aa10.88□□□□□ -0.67
TRAFD1-203ENST00000547063 TMEM101Q96IK0 257 aa10.88□□□□□ -0.67
TRAFD1-203ENST00000547063 SCGB3A1Q96QR1 104 aa10.88□□□□□ -0.67
TRAFD1-203ENST00000547063 HSPB8Q9UJY1 196 aa10.88□□□□□ -0.67
TRAFD1-203ENST00000547063 CSDC2Q9Y534 153 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-203ENST00000547063 A0A087WX48 190 aa10.87□□□□□ -0.67
TRAFD1-203ENST00000547063 TMEM262E9PQX1 116 aa10.87□□□□□ -0.67
TRAFD1-203ENST00000547063 FGF6P10767 208 aa10.87□□□□□ -0.67
TRAFD1-203ENST00000547063 GAGE6Q13070 117 aa10.87□□□□□ -0.67
TRAFD1-203ENST00000547063 PDZD11Q5EBL8 140 aa10.87□□□□□ -0.67
TRAFD1-203ENST00000547063 UBE2DNLQ8IWF7 75 aa10.87□□□□□ -0.67
TRAFD1-203ENST00000547063 HIST3H2BBQ8N257 126 aa10.87□□□□□ -0.67
TRAFD1-203ENST00000547063 TMEM141Q96I45 108 aa10.87□□□□□ -0.67
TRAFD1-203ENST00000547063 TIMM17AQ99595 171 aa10.87□□□□□ -0.67
TRAFD1-203ENST00000547063 UPK3BQ9BT76 320 aa10.87□□□□□ -0.67
TRAFD1-203ENST00000547063 LINC00588Q9Y4M8 146 aa10.87□□□□□ -0.67
TRAFD1-203ENST00000547063 A0A1B0GUV1 79 aa10.86□□□□□ -0.67
TRAFD1-203ENST00000547063 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.86□□□□□ -0.67
TRAFD1-203ENST00000547063 CASC10Q5T4H9 136 aa10.86□□□□□ -0.67
TRAFD1-203ENST00000547063 OR5A1Q8NGJ0 315 aa10.86□□□□□ -0.67
TRAFD1-203ENST00000547063 UBE2D4Q9Y2X8 147 aa10.86□□□□□ -0.67
TRAFD1-203ENST00000547063 IGIPA6NJ69 53 aa10.84□□□□□ -0.67
TRAFD1-203ENST00000547063 FABP4P15090 132 aa10.84□□□□□ -0.67
TRAFD1-203ENST00000547063 MRPS36P82909 103 aaKnown RBP10.84□□□□□ -0.67
TRAFD1-203ENST00000547063 Q6ZN92 141 aa10.84□□□□□ -0.67
TRAFD1-203ENST00000547063 SIVA1O15304 175 aa10.83□□□□□ -0.68
TRAFD1-203ENST00000547063 RBX1P62877 108 aa10.83□□□□□ -0.68
TRAFD1-203ENST00000547063 WFDC10BQ8IUB3 73 aa10.83□□□□□ -0.68
TRAFD1-203ENST00000547063 IFI27L1Q96BM0 104 aa10.83□□□□□ -0.68
TRAFD1-203ENST00000547063 K7EP13 123 aa10.82□□□□□ -0.68
TRAFD1-203ENST00000547063 MPV17L2Q567V2 206 aa10.82□□□□□ -0.68
TRAFD1-203ENST00000547063 LINC01556Q5JQF7 62 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms