RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 DYSFO75923 2080 aa3.21□□□□□ -1.89
NPAS3-204ENST00000546849 ACANP16112 2415 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 TRBV7-1A0A0A6YYK4 115 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 IGKV2-24A0A0C4DH68 120 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 K7EMI3 77 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 SLC17A3O00476 420 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 LTAP01374 205 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 HLA-DRB1P01911 266 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 ORM1P02763 201 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 PRTN3P24158 256 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 FOXA3P55318 350 aaPredicted RBP3.21□□□□□ -1.9
NPAS3-204ENST00000546849 ARF6P62330 175 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 ATP5G2Q06055 141 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 FXYD3Q14802 87 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 CLEC12BQ2HXU8 276 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 SPATA45Q537H7 98 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 SPATA31B1PQ5VZV4 182 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 MRPL54Q6P161 138 aaKnown RBP3.21□□□□□ -1.9
NPAS3-204ENST00000546849 TMEM136Q6ZRR5 245 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 BOD1L2Q8IYS8 172 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 ZNF664Q8N3J9 261 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 TEX29Q8N6K0 151 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 LINC00304Q8N9R0 145 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 ZNF738Q8NE65 137 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 OR11H6Q8NGC7 330 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 BLNKQ8WV28 456 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 LEAP2Q969E1 77 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 SHANK2-AS3Q9BTD1 123 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 FAM103A1Q9BTL3 118 aaKnown RBP3.21□□□□□ -1.9
NPAS3-204ENST00000546849 SMPXQ9UHP9 88 aa3.21□□□□□ -1.9
NPAS3-204ENST00000546849 COL27A1Q8IZC6 1860 aaPredicted RBP3.21□□□□□ -1.9
NPAS3-204ENST00000546849 DIDO1Q9BTC0 2240 aaKnown RBP3.21□□□□□ -1.9
NPAS3-204ENST00000546849 YLPM1P49750 1951 aaKnown RBP3.2□□□□□ -1.9
NPAS3-204ENST00000546849 RYR3Q15413 4870 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 TRAV3A0A0B4J244 114 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 TMEM189A5PLL7 270 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 RBAKDNA6NC62 111 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 OR2T8A6NH00 312 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 GGTLC3B5MD39 225 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 IGHV3-7P01780 117 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 CCL3L1P16619 93 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 PMVKQ15126 192 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 GTF2H5Q6ZYL4 71 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 NUP35Q8NFH5 326 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 FXYD5Q96DB9 178 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 IGF2BP2-AS1Q96M15 143 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 METTL26Q96S19 204 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 DERL1Q9BUN8 251 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 RNASE7Q9H1E1 156 aaKnown RBP3.2□□□□□ -1.9
NPAS3-204ENST00000546849 PRO1933Q9H354 126 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 NXT2Q9NPJ8 142 aaKnown RBP3.2□□□□□ -1.9
NPAS3-204ENST00000546849 VPS13CQ709C8 3753 aa3.2□□□□□ -1.9
NPAS3-204ENST00000546849 TRBV20OR9-2A0A075B6H5 130 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 TRBV19A0A075B6N1 114 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 IGLC7A0M8Q6 106 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 GRIFINA4D1Z8 144 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 FAM223BA6NKX1 122 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 FABP5P3A8MUU1 101 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 C16orf90A8MZG2 172 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 H3BUA1 57 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 J3QR89 54 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 K7EN84 100 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 CRXO43186 299 aaPredicted RBP3.19□□□□□ -1.9
NPAS3-204ENST00000546849 NDUFS5O43920 106 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 NDUFA3O95167 84 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 IGLC1P0CG04 106 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 NPPCP23582 126 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 TCL1AP56279 114 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 SEC11AP67812 179 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 WT1-ASQ06250 92 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 TMEM97Q5BJF2 176 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 TMEM78Q5T7P6 136 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 LYRM7Q5U5X0 104 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 HCP5Q6MZN7 132 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 PRNTQ86SH4 94 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 FAM223AQ8IWN6 122 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 RPRMLQ8N4K4 120 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 TTC9CQ8N5M4 171 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 LY6G5BQ8NDX9 201 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 C18orf32Q8TCD1 76 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 ORAOV1Q8WV07 137 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 FAM167A-AS1Q96KT0 104 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 MAP1LC3AQ9H492 121 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 LENEPQ9Y5L5 61 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 V9GYY9 64 aa3.19□□□□□ -1.9
NPAS3-204ENST00000546849 DSCAML1Q8TD84 2053 aa3.18□□□□□ -1.9
NPAS3-204ENST00000546849 KMT2CQ8NEZ4 4911 aaKnown RBP3.18□□□□□ -1.9
NPAS3-204ENST00000546849 BIRC6Q9NR09 4857 aa3.18□□□□□ -1.9
NPAS3-204ENST00000546849 FAM240AA0A1B0GVK7 77 aa3.18□□□□□ -1.9
NPAS3-204ENST00000546849 OR4C46A6NHA9 309 aa3.18□□□□□ -1.9
NPAS3-204ENST00000546849 E7EQL1 145 aa3.18□□□□□ -1.9
NPAS3-204ENST00000546849 H3BRN7 92 aa3.18□□□□□ -1.9
NPAS3-204ENST00000546849 SPINK4O60575 86 aa3.18□□□□□ -1.9
NPAS3-204ENST00000546849 PYYP10082 97 aa3.18□□□□□ -1.9
NPAS3-204ENST00000546849 EFNA4P52798 201 aa3.18□□□□□ -1.9
NPAS3-204ENST00000546849 HIST1H1AQ02539 215 aaPredicted RBP3.18□□□□□ -1.9
NPAS3-204ENST00000546849 TTC32Q5I0X7 151 aa3.18□□□□□ -1.9
NPAS3-204ENST00000546849 FAM201AQ5SY85 155 aa3.18□□□□□ -1.9
NPAS3-204ENST00000546849 GOLT1AQ6ZVE7 132 aa3.18□□□□□ -1.9
NPAS3-204ENST00000546849 TCF23Q7RTU1 214 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms