RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 GAGE12HA6NDE8 117 aa7.86□□□□□ -1.15
SCAF11-208ENST00000546534 H7C1H1 209 aa7.86□□□□□ -1.15
SCAF11-208ENST00000546534 SSNA1O43805 119 aa7.86□□□□□ -1.15
SCAF11-208ENST00000546534 LTAP01374 205 aa7.86□□□□□ -1.15
SCAF11-208ENST00000546534 SULT1A2P50226 295 aa7.86□□□□□ -1.15
SCAF11-208ENST00000546534 SSTP61278 116 aa7.86□□□□□ -1.15
SCAF11-208ENST00000546534 SPANXN1Q5VSR9 72 aa7.86□□□□□ -1.15
SCAF11-208ENST00000546534 Q6ZRP5 223 aa7.86□□□□□ -1.15
SCAF11-208ENST00000546534 TMEM243Q9BU79 118 aa7.86□□□□□ -1.15
SCAF11-208ENST00000546534 NKX6-2Q9C056 277 aaPredicted RBP7.86□□□□□ -1.15
SCAF11-208ENST00000546534 SNAI2O43623 268 aa7.85□□□□□ -1.15
SCAF11-208ENST00000546534 M0QY20 66 aa7.84□□□□□ -1.15
SCAF11-208ENST00000546534 CXCL1P09341 107 aa7.84□□□□□ -1.15
SCAF11-208ENST00000546534 OR5AL1P0C617 328 aa7.84□□□□□ -1.15
SCAF11-208ENST00000546534 SMIM17P0DL12 118 aa7.84□□□□□ -1.15
SCAF11-208ENST00000546534 CTXND1A0A1B0GTU2 59 aa7.83□□□□□ -1.16
SCAF11-208ENST00000546534 FAM231BA6NCW3 169 aa7.83□□□□□ -1.16
SCAF11-208ENST00000546534 MARVELD1Q9BSK0 173 aa7.83□□□□□ -1.16
SCAF11-208ENST00000546534 LINC00474Q9P2X8 69 aa7.83□□□□□ -1.16
SCAF11-208ENST00000546534 GVQW2A0A096LPI5 108 aaPredicted RBP7.82□□□□□ -1.16
SCAF11-208ENST00000546534 IGKV3OR2-268A0A0C4DH90 116 aa7.82□□□□□ -1.16
SCAF11-208ENST00000546534 NKX2-5P52952 324 aaPredicted RBP7.82□□□□□ -1.16
SCAF11-208ENST00000546534 AP1S3Q96PC3 154 aa7.82□□□□□ -1.16
SCAF11-208ENST00000546534 KRTAP4-11Q9BYQ6 195 aa7.82□□□□□ -1.16
SCAF11-208ENST00000546534 MGPP08493 103 aa7.81□□□□□ -1.16
SCAF11-208ENST00000546534 AKR1C3P42330 323 aa7.81□□□□□ -1.16
SCAF11-208ENST00000546534 SUMO4Q6EEV6 95 aa7.81□□□□□ -1.16
SCAF11-208ENST00000546534 CHCHD10Q8WYQ3 142 aaPredicted RBP7.81□□□□□ -1.16
SCAF11-208ENST00000546534 UBE2L6O14933 153 aa7.8□□□□□ -1.16
SCAF11-208ENST00000546534 UPK1BO75841 260 aa7.8□□□□□ -1.16
SCAF11-208ENST00000546534 IFITM3Q01628 133 aa7.8□□□□□ -1.16
SCAF11-208ENST00000546534 CST9LP1Q5W188 147 aa7.8□□□□□ -1.16
SCAF11-208ENST00000546534 PGLYRP4Q96LB8 373 aa7.8□□□□□ -1.16
SCAF11-208ENST00000546534 A0A0U1RQV1 116 aa7.79□□□□□ -1.16
SCAF11-208ENST00000546534 RPL7L1Q6DKI1 246 aaKnown RBP7.79□□□□□ -1.16
SCAF11-208ENST00000546534 ZNF664Q8N3J9 261 aa7.79□□□□□ -1.16
SCAF11-208ENST00000546534 LINC00526Q96FQ7 95 aa7.79□□□□□ -1.16
SCAF11-208ENST00000546534 TCEAL7Q9BRU2 100 aa7.79□□□□□ -1.16
SCAF11-208ENST00000546534 PSORS1C2Q9UIG4 136 aa7.79□□□□□ -1.16
SCAF11-208ENST00000546534 AMTP48728 403 aa7.78□□□□□ -1.16
SCAF11-208ENST00000546534 FHITP49789 147 aa7.78□□□□□ -1.16
SCAF11-208ENST00000546534 RASL11AQ6T310 242 aa7.78□□□□□ -1.16
SCAF11-208ENST00000546534 PRR26Q8N8Z3 221 aa7.78□□□□□ -1.16
SCAF11-208ENST00000546534 STOML3Q8TAV4 291 aa7.78□□□□□ -1.16
SCAF11-208ENST00000546534 MLST8Q9BVC4 326 aa7.78□□□□□ -1.16
SCAF11-208ENST00000546534 FAT4Q6V0I7 4981 aa7.78□□□□□ -1.16
SCAF11-208ENST00000546534 MAP1LC3B2A6NCE7 125 aa7.77□□□□□ -1.17
SCAF11-208ENST00000546534 FOXI1Q12951 378 aa7.77□□□□□ -1.17
SCAF11-208ENST00000546534 COTL1Q14019 142 aa7.77□□□□□ -1.17
SCAF11-208ENST00000546534 S100ZQ8WXG8 99 aa7.77□□□□□ -1.17
SCAF11-208ENST00000546534 MAP1LC3BQ9GZQ8 125 aa7.77□□□□□ -1.17
SCAF11-208ENST00000546534 NIT2Q9NQR4 276 aa7.77□□□□□ -1.17
SCAF11-208ENST00000546534 PKIGQ9Y2B9 76 aa7.77□□□□□ -1.17
SCAF11-208ENST00000546534 TRAV26-2A0A0B4J265 109 aa7.76□□□□□ -1.17
SCAF11-208ENST00000546534 CACNG7P62955 275 aa7.76□□□□□ -1.17
SCAF11-208ENST00000546534 AKR1C8PQ5T2L2 129 aa7.76□□□□□ -1.17
SCAF11-208ENST00000546534 LINC00299Q6ZSB3 139 aa7.76□□□□□ -1.17
SCAF11-208ENST00000546534 BAGE2Q86Y30 109 aa7.76□□□□□ -1.17
SCAF11-208ENST00000546534 CARD19Q96LW7 228 aa7.76□□□□□ -1.17
SCAF11-208ENST00000546534 BORCS7-ASMTA0A0B4J1R7 106 aa7.75□□□□□ -1.17
SCAF11-208ENST00000546534 A0A1W2PNN7 141 aa7.75□□□□□ -1.17
SCAF11-208ENST00000546534 KRTAP9-7A8MTY7 169 aa7.75□□□□□ -1.17
SCAF11-208ENST00000546534 PAGE4O60829 102 aa7.75□□□□□ -1.17
SCAF11-208ENST00000546534 S100A9P06702 114 aaKnown RBP7.75□□□□□ -1.17
SCAF11-208ENST00000546534 Q5BKY6 102 aa7.75□□□□□ -1.17
SCAF11-208ENST00000546534 TPPP3Q9BW30 176 aa7.75□□□□□ -1.17
SCAF11-208ENST00000546534 MT-ND6P03923 174 aa7.74□□□□□ -1.17
SCAF11-208ENST00000546534 IGLC6P0CF74 106 aa7.74□□□□□ -1.17
SCAF11-208ENST00000546534 PTTG1IPP53801 180 aa7.74□□□□□ -1.17
SCAF11-208ENST00000546534 PRR4Q16378 134 aa7.74□□□□□ -1.17
SCAF11-208ENST00000546534 AMMECR1LQ6DCA0 310 aa7.74□□□□□ -1.17
SCAF11-208ENST00000546534 IGHV1-58A0A0C4DH39 117 aa7.73□□□□□ -1.17
SCAF11-208ENST00000546534 XCL1P47992 114 aa7.73□□□□□ -1.17
SCAF11-208ENST00000546534 SYCNQ0VAF6 134 aa7.73□□□□□ -1.17
SCAF11-208ENST00000546534 GAGE2BQ13066 116 aa7.73□□□□□ -1.17
SCAF11-208ENST00000546534 RNASEKQ6P5S7 137 aaKnown RBP7.73□□□□□ -1.17
SCAF11-208ENST00000546534 FER1L6-AS1Q8NA97 138 aa7.73□□□□□ -1.17
SCAF11-208ENST00000546534 MED28Q9H204 178 aa7.73□□□□□ -1.17
SCAF11-208ENST00000546534 NDUFA13Q9P0J0 144 aa7.73□□□□□ -1.17
SCAF11-208ENST00000546534 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.72□□□□□ -1.17
SCAF11-208ENST00000546534 IGKV2-29A2NJV5 120 aaPredicted RBP7.72□□□□□ -1.17
SCAF11-208ENST00000546534 C1orf137Q5JT78 98 aa7.72□□□□□ -1.17
SCAF11-208ENST00000546534 LOC107984640A0A0U1RRK4 108 aa7.71□□□□□ -1.18
SCAF11-208ENST00000546534 CCL25O15444 150 aa7.71□□□□□ -1.18
SCAF11-208ENST00000546534 FGF6P10767 208 aa7.71□□□□□ -1.18
SCAF11-208ENST00000546534 NTF3P20783 257 aa7.71□□□□□ -1.18
SCAF11-208ENST00000546534 Q6ZNX1 250 aa7.71□□□□□ -1.18
SCAF11-208ENST00000546534 DIRC1Q969H9 104 aa7.71□□□□□ -1.18
SCAF11-208ENST00000546534 ALG5Q9Y673 324 aa7.71□□□□□ -1.18
SCAF11-208ENST00000546534 LINC00959A0A1B0GUT2 108 aa7.7□□□□□ -1.18
SCAF11-208ENST00000546534 TRGC1P0CF51 173 aa7.7□□□□□ -1.18
SCAF11-208ENST00000546534 C9orf116Q5BN46 136 aaPredicted RBP7.7□□□□□ -1.18
SCAF11-208ENST00000546534 TMUB2Q71RG4 321 aa7.7□□□□□ -1.18
SCAF11-208ENST00000546534 OR2D3Q8NGH3 330 aa7.7□□□□□ -1.18
SCAF11-208ENST00000546534 OR5A1Q8NGJ0 315 aa7.7□□□□□ -1.18
SCAF11-208ENST00000546534 H7C423 109 aa7.69□□□□□ -1.18
SCAF11-208ENST00000546534 CAMPP49913 170 aa7.69□□□□□ -1.18
SCAF11-208ENST00000546534 PHF5AQ7RTV0 110 aaKnown RBP7.69□□□□□ -1.18
SCAF11-208ENST00000546534 FXYD6-FXYD2A0A087WZ82 144 aa7.68□□□□□ -1.18
SCAF11-208ENST00000546534 F2Z2F3 143 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms