RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 NIT2Q9NQR4 276 aa7.86□□□□□ -1.15
COPS7A-221ENST00000546229 GVQW2A0A096LPI5 108 aaPredicted RBP7.85□□□□□ -1.15
COPS7A-221ENST00000546229 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.85□□□□□ -1.15
COPS7A-221ENST00000546229 RAB5CP51148 216 aa7.85□□□□□ -1.15
COPS7A-221ENST00000546229 COX6A2Q02221 97 aa7.85□□□□□ -1.15
COPS7A-221ENST00000546229 LYZL1Q6UWQ5 148 aa7.85□□□□□ -1.15
COPS7A-221ENST00000546229 PRSS3P2Q8NHM4 247 aa7.85□□□□□ -1.15
COPS7A-221ENST00000546229 TPPP3Q9BW30 176 aa7.85□□□□□ -1.15
COPS7A-221ENST00000546229 MANBALQ9NQG1 85 aa7.85□□□□□ -1.15
COPS7A-221ENST00000546229 RAB19A4D1S5 217 aa7.84□□□□□ -1.15
COPS7A-221ENST00000546229 GAGE12HA6NDE8 117 aa7.84□□□□□ -1.15
COPS7A-221ENST00000546229 RPS20P60866 119 aaKnown RBP7.84□□□□□ -1.15
COPS7A-221ENST00000546229 Q6ZNX1 250 aa7.84□□□□□ -1.15
COPS7A-221ENST00000546229 GATD1Q8NB37 220 aa7.84□□□□□ -1.15
COPS7A-221ENST00000546229 DPH3P1Q9H4G8 78 aa7.84□□□□□ -1.15
COPS7A-221ENST00000546229 GNG13Q9P2W3 67 aa7.84□□□□□ -1.15
COPS7A-221ENST00000546229 LPAP08519 4548 aa7.84□□□□□ -1.15
COPS7A-221ENST00000546229 A0A096LNI7 61 aa7.83□□□□□ -1.16
COPS7A-221ENST00000546229 F2Z2F3 143 aa7.83□□□□□ -1.16
COPS7A-221ENST00000546229 NDUFS6O75380 124 aaKnown RBP7.83□□□□□ -1.16
COPS7A-221ENST00000546229 NTF3P20783 257 aa7.83□□□□□ -1.16
COPS7A-221ENST00000546229 AMTP48728 403 aa7.83□□□□□ -1.16
COPS7A-221ENST00000546229 KRTAP10-8P60410 259 aa7.83□□□□□ -1.16
COPS7A-221ENST00000546229 FOXI1Q12951 378 aa7.83□□□□□ -1.16
COPS7A-221ENST00000546229 HIGD2BQ4VC39 106 aa7.83□□□□□ -1.16
COPS7A-221ENST00000546229 C9orf62Q8N4C0 152 aa7.83□□□□□ -1.16
COPS7A-221ENST00000546229 AP5S1Q9NUS5 200 aa7.83□□□□□ -1.16
COPS7A-221ENST00000546229 TRAV26-2A0A0B4J265 109 aa7.82□□□□□ -1.16
COPS7A-221ENST00000546229 TRGC1P0CF51 173 aa7.82□□□□□ -1.16
COPS7A-221ENST00000546229 RPS10P46783 165 aaKnown RBP7.82□□□□□ -1.16
COPS7A-221ENST00000546229 COTL1Q14019 142 aa7.82□□□□□ -1.16
COPS7A-221ENST00000546229 WDR73Q6P4I2 378 aa7.82□□□□□ -1.16
COPS7A-221ENST00000546229 CHCHD10Q8WYQ3 142 aaPredicted RBP7.82□□□□□ -1.16
COPS7A-221ENST00000546229 A0A0J9YXV3 536 aa7.81□□□□□ -1.16
COPS7A-221ENST00000546229 RGS21Q2M5E4 152 aa7.81□□□□□ -1.16
COPS7A-221ENST00000546229 RPL39LQ96EH5 51 aaKnown RBP7.81□□□□□ -1.16
COPS7A-221ENST00000546229 FAM231BA6NCW3 169 aa7.8□□□□□ -1.16
COPS7A-221ENST00000546229 K7EN84 100 aa7.8□□□□□ -1.16
COPS7A-221ENST00000546229 GNG4P50150 75 aa7.8□□□□□ -1.16
COPS7A-221ENST00000546229 SULT1A2P50226 295 aa7.8□□□□□ -1.16
COPS7A-221ENST00000546229 MEF2BQ02080 365 aaPredicted RBP7.8□□□□□ -1.16
COPS7A-221ENST00000546229 SRSF9Q13242 221 aaKnown RBP eCLIP7.8□□□□□ -1.16
COPS7A-221ENST00000546229 C7orf33Q8WU49 177 aa7.8□□□□□ -1.16
COPS7A-221ENST00000546229 GTSF1Q8WW33 167 aa7.8□□□□□ -1.16
COPS7A-221ENST00000546229 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.79□□□□□ -1.16
COPS7A-221ENST00000546229 IGKV2-24A0A0C4DH68 120 aa7.79□□□□□ -1.16
COPS7A-221ENST00000546229 KANTRA0A1W2PQU2 76 aa7.79□□□□□ -1.16
COPS7A-221ENST00000546229 IGKV2-29A2NJV5 120 aaPredicted RBP7.79□□□□□ -1.16
COPS7A-221ENST00000546229 UBE2L6O14933 153 aa7.79□□□□□ -1.16
COPS7A-221ENST00000546229 IFNA1P01562 189 aa7.79□□□□□ -1.16
COPS7A-221ENST00000546229 FOXA3P55318 350 aaPredicted RBP7.79□□□□□ -1.16
COPS7A-221ENST00000546229 MAJINQ3KP22 176 aa7.79□□□□□ -1.16
COPS7A-221ENST00000546229 STPG4Q8N801 248 aa7.79□□□□□ -1.16
COPS7A-221ENST00000546229 NUDT10Q8NFP7 164 aa7.79□□□□□ -1.16
COPS7A-221ENST00000546229 NUDT11Q96G61 164 aa7.79□□□□□ -1.16
COPS7A-221ENST00000546229 XKRY2A2RUG3 117 aa7.78□□□□□ -1.16
COPS7A-221ENST00000546229 PDE6DO43924 150 aa7.78□□□□□ -1.16
COPS7A-221ENST00000546229 NCR2O95944 276 aa7.78□□□□□ -1.16
COPS7A-221ENST00000546229 BCL2P10415 239 aa7.78□□□□□ -1.16
COPS7A-221ENST00000546229 FGF6P10767 208 aa7.78□□□□□ -1.16
COPS7A-221ENST00000546229 CFAP161Q6P656 301 aa7.78□□□□□ -1.16
COPS7A-221ENST00000546229 IGKV3OR2-268A0A0C4DH90 116 aa7.77□□□□□ -1.17
COPS7A-221ENST00000546229 H7C423 109 aa7.77□□□□□ -1.17
COPS7A-221ENST00000546229 GAS8-AS1O95177 125 aa7.77□□□□□ -1.17
COPS7A-221ENST00000546229 ESDP10768 282 aa7.77□□□□□ -1.17
COPS7A-221ENST00000546229 RNASE7Q9H1E1 156 aaKnown RBP7.77□□□□□ -1.17
COPS7A-221ENST00000546229 RPP21Q9H633 154 aaKnown RBP7.77□□□□□ -1.17
COPS7A-221ENST00000546229 TRBV6-5A0A0K0K1A5 114 aa7.76□□□□□ -1.17
COPS7A-221ENST00000546229 SDHAF1A6NFY7 115 aa7.76□□□□□ -1.17
COPS7A-221ENST00000546229 EIF5AP63241 154 aaKnown RBP7.76□□□□□ -1.17
COPS7A-221ENST00000546229 SPINK6Q6UWN8 80 aa7.76□□□□□ -1.17
COPS7A-221ENST00000546229 OR5A1Q8NGJ0 315 aa7.76□□□□□ -1.17
COPS7A-221ENST00000546229 LINC00526Q96FQ7 95 aa7.76□□□□□ -1.17
COPS7A-221ENST00000546229 DPH3Q96FX2 82 aa7.76□□□□□ -1.17
COPS7A-221ENST00000546229 LINC00959A0A1B0GUT2 108 aa7.75□□□□□ -1.17
COPS7A-221ENST00000546229 TSHBP01222 138 aa7.75□□□□□ -1.17
COPS7A-221ENST00000546229 APCSP02743 223 aa7.75□□□□□ -1.17
COPS7A-221ENST00000546229 ZNF25P17030 456 aaPredicted RBP7.75□□□□□ -1.17
COPS7A-221ENST00000546229 TWIST1Q15672 202 aa7.75□□□□□ -1.17
COPS7A-221ENST00000546229 LYPD6BQ8NI32 183 aa7.75□□□□□ -1.17
COPS7A-221ENST00000546229 MED9Q9NWA0 146 aa7.75□□□□□ -1.17
COPS7A-221ENST00000546229 OCC1Q8TAD7 63 aa7.74□□□□□ -1.17
COPS7A-221ENST00000546229 CCL25O15444 150 aa7.73□□□□□ -1.17
COPS7A-221ENST00000546229 XCL1P47992 114 aa7.73□□□□□ -1.17
COPS7A-221ENST00000546229 AMMECR1LQ6DCA0 310 aa7.73□□□□□ -1.17
COPS7A-221ENST00000546229 MRPL52Q86TS9 123 aaKnown RBP7.73□□□□□ -1.17
COPS7A-221ENST00000546229 CARD19Q96LW7 228 aa7.73□□□□□ -1.17
COPS7A-221ENST00000546229 BIN3Q9NQY0 253 aa7.73□□□□□ -1.17
COPS7A-221ENST00000546229 IGHV1-58A0A0C4DH39 117 aa7.72□□□□□ -1.17
COPS7A-221ENST00000546229 RNASEKQ6P5S7 137 aaKnown RBP7.72□□□□□ -1.17
COPS7A-221ENST00000546229 LINC00474Q9P2X8 69 aa7.72□□□□□ -1.17
COPS7A-221ENST00000546229 I3L3M4 83 aa7.71□□□□□ -1.18
COPS7A-221ENST00000546229 PTTG1IPP53801 180 aa7.71□□□□□ -1.18
COPS7A-221ENST00000546229 POLR2KP53803 58 aaKnown RBP7.71□□□□□ -1.18
COPS7A-221ENST00000546229 FAM231DQ6ZW35 169 aa7.71□□□□□ -1.18
COPS7A-221ENST00000546229 CDC42SE2Q9NRR3 84 aa7.71□□□□□ -1.18
COPS7A-221ENST00000546229 TMEM242Q9NWH2 141 aa7.71□□□□□ -1.18
COPS7A-221ENST00000546229 TRBV27A0A0K0K1C4 114 aa7.7□□□□□ -1.18
COPS7A-221ENST00000546229 A0A1W2PNN7 141 aa7.7□□□□□ -1.18
COPS7A-221ENST00000546229 REG3GQ6UW15 175 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 823.8 ms