RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 USMG5Q96IX5 58 aa7.39□□□□□ -1.23
TRAF1-203ENST00000546084 ITPR2Q14571 2701 aa7.39□□□□□ -1.23
TRAF1-203ENST00000546084 LOC107984640A0A0U1RRK4 108 aa7.38□□□□□ -1.23
TRAF1-203ENST00000546084 RNASE1P07998 156 aaKnown RBP7.38□□□□□ -1.23
TRAF1-203ENST00000546084 NDUFV3P56181 108 aaKnown RBP7.38□□□□□ -1.23
TRAF1-203ENST00000546084 SUMO4Q6EEV6 95 aa7.38□□□□□ -1.23
TRAF1-203ENST00000546084 HRCT1Q6UXD1 115 aa7.38□□□□□ -1.23
TRAF1-203ENST00000546084 RETNQ9HD89 108 aa7.38□□□□□ -1.23
TRAF1-203ENST00000546084 A0A0J9YXV3 536 aa7.38□□□□□ -1.23
TRAF1-203ENST00000546084 ZMAT4Q9H898 229 aa7.38□□□□□ -1.23
TRAF1-203ENST00000546084 ESM1Q9NQ30 184 aa7.38□□□□□ -1.23
TRAF1-203ENST00000546084 STHQ8IWL8 128 aa7.37□□□□□ -1.23
TRAF1-203ENST00000546084 NRACQ8N912 160 aa7.37□□□□□ -1.23
TRAF1-203ENST00000546084 DLX4Q92988 240 aaPredicted RBP7.37□□□□□ -1.23
TRAF1-203ENST00000546084 A8MZ25 164 aa7.37□□□□□ -1.23
TRAF1-203ENST00000546084 DEFB130BP0DP73 79 aa7.37□□□□□ -1.23
TRAF1-203ENST00000546084 DEFB130AP0DP74 79 aa7.37□□□□□ -1.23
TRAF1-203ENST00000546084 VCYO14598 125 aa7.37□□□□□ -1.23
TRAF1-203ENST00000546084 LINC00694P0DN24 101 aa7.37□□□□□ -1.23
TRAF1-203ENST00000546084 TAL2Q16559 108 aa7.37□□□□□ -1.23
TRAF1-203ENST00000546084 FAM19A5Q7Z5A7 132 aaPredicted RBP7.37□□□□□ -1.23
TRAF1-203ENST00000546084 LINC01356Q8N9X3 169 aa7.37□□□□□ -1.23
TRAF1-203ENST00000546084 RASL10AQ92737 203 aa7.37□□□□□ -1.23
TRAF1-203ENST00000546084 CNFNQ9BYD5 112 aa7.37□□□□□ -1.23
TRAF1-203ENST00000546084 A8MWV9 139 aa7.36□□□□□ -1.23
TRAF1-203ENST00000546084 Q8N6K4 173 aa7.36□□□□□ -1.23
TRAF1-203ENST00000546084 MRAPQ8TCY5 172 aa7.36□□□□□ -1.23
TRAF1-203ENST00000546084 C11orf86A6NJI1 115 aa7.36□□□□□ -1.23
TRAF1-203ENST00000546084 ZFAND2AQ8N6M9 145 aa7.36□□□□□ -1.23
TRAF1-203ENST00000546084 SPATA25Q9BR10 227 aa7.36□□□□□ -1.23
TRAF1-203ENST00000546084 IGHV1OR15-1A0A075B7D0 117 aa7.36□□□□□ -1.23
TRAF1-203ENST00000546084 LGALS1P09382 135 aaKnown RBP7.36□□□□□ -1.23
TRAF1-203ENST00000546084 ZFP2Q6ZN57 461 aa7.36□□□□□ -1.23
TRAF1-203ENST00000546084 PIFOQ8TCI5 191 aa7.36□□□□□ -1.23
TRAF1-203ENST00000546084 PLEKHB2Q96CS7 222 aa7.36□□□□□ -1.23
TRAF1-203ENST00000546084 RBAKDNA6NC62 111 aa7.35□□□□□ -1.23
TRAF1-203ENST00000546084 IGLV2-18A0A075B6J9 118 aa7.35□□□□□ -1.23
TRAF1-203ENST00000546084 TRAV8-3A0A0A6YYJ7 113 aa7.35□□□□□ -1.23
TRAF1-203ENST00000546084 DNAJC30Q96LL9 226 aa7.35□□□□□ -1.23
TRAF1-203ENST00000546084 TINCRA0A1B0GVN0 87 aa7.35□□□□□ -1.23
TRAF1-203ENST00000546084 CLPSL2Q6UWE3 100 aa7.35□□□□□ -1.23
TRAF1-203ENST00000546084 COX8CQ7Z4L0 72 aa7.35□□□□□ -1.23
TRAF1-203ENST00000546084 TMEM61Q8N0U2 210 aa7.35□□□□□ -1.23
TRAF1-203ENST00000546084 ZNRF2Q8NHG8 242 aa7.35□□□□□ -1.23
TRAF1-203ENST00000546084 PPDPFLQ8WWR9 84 aa7.35□□□□□ -1.23
TRAF1-203ENST00000546084 BAALCQ8WXS3 180 aa7.34□□□□□ -1.23
TRAF1-203ENST00000546084 J3QLI3 93 aa7.34□□□□□ -1.23
TRAF1-203ENST00000546084 IGHG2P01859 326 aa7.34□□□□□ -1.23
TRAF1-203ENST00000546084 F8WDY8 70 aa7.34□□□□□ -1.24
TRAF1-203ENST00000546084 PPP1R17O96001 155 aa7.34□□□□□ -1.24
TRAF1-203ENST00000546084 C9orf47Q6ZRZ4 202 aa7.34□□□□□ -1.24
TRAF1-203ENST00000546084 UBE2L6O14933 153 aa7.33□□□□□ -1.24
TRAF1-203ENST00000546084 XGP55808 180 aa7.33□□□□□ -1.24
TRAF1-203ENST00000546084 FOXI1Q12951 378 aa7.33□□□□□ -1.24
TRAF1-203ENST00000546084 ZNF575Q86XF7 245 aa7.33□□□□□ -1.24
TRAF1-203ENST00000546084 TRAV8-4A0A0B4J246 113 aa7.33□□□□□ -1.24
TRAF1-203ENST00000546084 DEFB4AO15263 64 aa7.33□□□□□ -1.24
TRAF1-203ENST00000546084 NOTCH1P46531 2555 aa7.32□□□□□ -1.24
TRAF1-203ENST00000546084 TRBV7-3A0A075B6L6 115 aa7.32□□□□□ -1.24
TRAF1-203ENST00000546084 TOMM6Q96B49 74 aa7.32□□□□□ -1.24
TRAF1-203ENST00000546084 WFDC10AQ9H1F0 79 aa7.32□□□□□ -1.24
TRAF1-203ENST00000546084 PMVKQ15126 192 aa7.32□□□□□ -1.24
TRAF1-203ENST00000546084 NEXN-AS1Q8NBZ9 246 aa7.32□□□□□ -1.24
TRAF1-203ENST00000546084 ZNF580Q9UK33 172 aa7.32□□□□□ -1.24
TRAF1-203ENST00000546084 BSNQ9UPA5 3926 aa7.32□□□□□ -1.24
TRAF1-203ENST00000546084 TRAV12-1A0A0B4J245 112 aa7.32□□□□□ -1.24
TRAF1-203ENST00000546084 EBI3Q14213 229 aa7.32□□□□□ -1.24
TRAF1-203ENST00000546084 PF4P02776 101 aa7.31□□□□□ -1.24
TRAF1-203ENST00000546084 RNASE3P12724 160 aaKnown RBP7.31□□□□□ -1.24
TRAF1-203ENST00000546084 C19orf54Q5BKX5 351 aa7.31□□□□□ -1.24
TRAF1-203ENST00000546084 NIPBLQ6KC79 2804 aaeCLIP7.31□□□□□ -1.24
TRAF1-203ENST00000546084 MXRA5Q9NR99 2828 aa7.31□□□□□ -1.24
TRAF1-203ENST00000546084 A6NDX4 124 aa7.31□□□□□ -1.24
TRAF1-203ENST00000546084 WFDC11Q8NEX6 87 aa7.31□□□□□ -1.24
TRAF1-203ENST00000546084 Q9UF83 564 aa7.31□□□□□ -1.24
TRAF1-203ENST00000546084 SETXQ7Z333 2677 aaKnown RBP7.31□□□□□ -1.24
TRAF1-203ENST00000546084 J3QQQ9 107 aa7.31□□□□□ -1.24
TRAF1-203ENST00000546084 C1orf195Q5TG92 126 aa7.31□□□□□ -1.24
TRAF1-203ENST00000546084 MORN3Q6PF18 240 aaPredicted RBP7.31□□□□□ -1.24
TRAF1-203ENST00000546084 CHCHD5Q9BSY4 110 aa7.31□□□□□ -1.24
TRAF1-203ENST00000546084 TRGV4A0A0C4DH28 118 aa7.3□□□□□ -1.24
TRAF1-203ENST00000546084 C15orf53Q8NAA6 179 aa7.3□□□□□ -1.24
TRAF1-203ENST00000546084 BRK1Q8WUW1 75 aa7.3□□□□□ -1.24
TRAF1-203ENST00000546084 U3KQE9 123 aa7.3□□□□□ -1.24
TRAF1-203ENST00000546084 TIMM21Q9BVV7 248 aa7.3□□□□□ -1.24
TRAF1-203ENST00000546084 NOP10Q9NPE3 64 aaKnown RBP7.3□□□□□ -1.24
TRAF1-203ENST00000546084 TRACP01848 142 aa7.29□□□□□ -1.24
TRAF1-203ENST00000546084 RS1O15537 224 aa7.29□□□□□ -1.24
TRAF1-203ENST00000546084 PAPPA-AS1Q5QFB9 102 aa7.29□□□□□ -1.24
TRAF1-203ENST00000546084 HERVK_113P63121 156 aa7.29□□□□□ -1.24
TRAF1-203ENST00000546084 PEMTQ9UBM1 199 aa7.29□□□□□ -1.24
TRAF1-203ENST00000546084 TRGV11A0A075B6L2 103 aa7.28□□□□□ -1.24
TRAF1-203ENST00000546084 LINC01546A6NGU7 62 aa7.28□□□□□ -1.24
TRAF1-203ENST00000546084 TCL1BO95988 128 aa7.28□□□□□ -1.24
TRAF1-203ENST00000546084 GPHB5Q86YW7 130 aa7.28□□□□□ -1.24
TRAF1-203ENST00000546084 MRPL53Q96EL3 112 aaKnown RBP7.28□□□□□ -1.24
TRAF1-203ENST00000546084 PLA2G2AP14555 144 aa7.28□□□□□ -1.24
TRAF1-203ENST00000546084 CFAP126Q5VTH2 177 aa7.28□□□□□ -1.24
TRAF1-203ENST00000546084 PFN2P35080 140 aa7.28□□□□□ -1.24
TRAF1-203ENST00000546084 TRPT1Q86TN4 253 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms