RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 Q8N3U1 123 aa11.13□□□□□ -0.63
LIMS2-217ENST00000545738 TRBV6-5A0A0K0K1A5 114 aa11.12□□□□□ -0.63
LIMS2-217ENST00000545738 SDHAF1A6NFY7 115 aa11.12□□□□□ -0.63
LIMS2-217ENST00000545738 CKS2P33552 79 aa11.12□□□□□ -0.63
LIMS2-217ENST00000545738 TIRAPP58753 221 aa11.12□□□□□ -0.63
LIMS2-217ENST00000545738 SH2D6Q7Z4S9 175 aa11.12□□□□□ -0.63
LIMS2-217ENST00000545738 FRZBQ92765 325 aa11.12□□□□□ -0.63
LIMS2-217ENST00000545738 UPK3BQ9BT76 320 aa11.12□□□□□ -0.63
LIMS2-217ENST00000545738 TMEM70Q9BUB7 260 aa11.12□□□□□ -0.63
LIMS2-217ENST00000545738 GNB1LQ9BYB4 327 aa11.12□□□□□ -0.63
LIMS2-217ENST00000545738 HSBP1L1C9JCN9 74 aa11.11□□□□□ -0.63
LIMS2-217ENST00000545738 DLEU1O43261 78 aa11.11□□□□□ -0.63
LIMS2-217ENST00000545738 TNFRSF6BO95407 300 aa11.11□□□□□ -0.63
LIMS2-217ENST00000545738 POLR2KP53803 58 aaKnown RBP11.11□□□□□ -0.63
LIMS2-217ENST00000545738 KRTAP1-5Q9BYS1 174 aa11.11□□□□□ -0.63
LIMS2-217ENST00000545738 IGLV2-18A0A075B6J9 118 aa11.1□□□□□ -0.63
LIMS2-217ENST00000545738 LELP1Q5T871 98 aa11.1□□□□□ -0.63
LIMS2-217ENST00000545738 DAZ4Q86SG3 579 aaKnown RBP11.1□□□□□ -0.63
LIMS2-217ENST00000545738 DAZ3Q9NR90 486 aaKnown RBP11.1□□□□□ -0.63
LIMS2-217ENST00000545738 HLA-DQA1P01909 254 aa11.09□□□□□ -0.63
LIMS2-217ENST00000545738 ORMDL3Q8N138 153 aa11.09□□□□□ -0.63
LIMS2-217ENST00000545738 Q9H8V8 135 aa11.09□□□□□ -0.63
LIMS2-217ENST00000545738 TRBV6-8A0A0A6YYG3 113 aa11.09□□□□□ -0.63
LIMS2-217ENST00000545738 APCSP02743 223 aa11.09□□□□□ -0.63
LIMS2-217ENST00000545738 SUMO2P61956 95 aaKnown RBP11.09□□□□□ -0.63
LIMS2-217ENST00000545738 PRELID3AQ96N28 172 aa11.09□□□□□ -0.63
LIMS2-217ENST00000545738 MRPL18Q9H0U6 180 aaKnown RBP11.09□□□□□ -0.63
LIMS2-217ENST00000545738 ST20Q9HBF5 79 aa11.09□□□□□ -0.63
LIMS2-217ENST00000545738 TRBV27A0A0K0K1C4 114 aa11.08□□□□□ -0.64
LIMS2-217ENST00000545738 TSHBP01222 138 aa11.07□□□□□ -0.64
LIMS2-217ENST00000545738 FAT2Q9NYQ8 4349 aa11.07□□□□□ -0.64
LIMS2-217ENST00000545738 M0R143 59 aa11.06□□□□□ -0.64
LIMS2-217ENST00000545738 PPBPP02775 128 aa11.06□□□□□ -0.64
LIMS2-217ENST00000545738 M0R2N4 97 aa11.06□□□□□ -0.64
LIMS2-217ENST00000545738 SIVA1O15304 175 aa11.06□□□□□ -0.64
LIMS2-217ENST00000545738 DNAH17Q9UFH2 4485 aa11.05□□□□□ -0.64
LIMS2-217ENST00000545738 PRSS47A8MTI9 375 aa11.05□□□□□ -0.64
LIMS2-217ENST00000545738 I3L3M4 83 aa11.05□□□□□ -0.64
LIMS2-217ENST00000545738 MT-ND6P03923 174 aa11.05□□□□□ -0.64
LIMS2-217ENST00000545738 ZNF25P17030 456 aaPredicted RBP11.05□□□□□ -0.64
LIMS2-217ENST00000545738 G0S2P27469 103 aa11.05□□□□□ -0.64
LIMS2-217ENST00000545738 IQCJQ1A5X6 159 aa11.05□□□□□ -0.64
LIMS2-217ENST00000545738 C20orf78Q9BR46 151 aa11.05□□□□□ -0.64
LIMS2-217ENST00000545738 ALKBH7Q9BT30 221 aaPredicted RBP11.05□□□□□ -0.64
LIMS2-217ENST00000545738 TRAPPC1Q9Y5R8 145 aa11.05□□□□□ -0.64
LIMS2-217ENST00000545738 PHOX2AO14813 284 aa11.04□□□□□ -0.64
LIMS2-217ENST00000545738 DNAH10OSP0CZ25 163 aa11.04□□□□□ -0.64
LIMS2-217ENST00000545738 COX19Q49B96 90 aa11.04□□□□□ -0.64
LIMS2-217ENST00000545738 NIT1Q86X76 327 aa11.04□□□□□ -0.64
LIMS2-217ENST00000545738 CHCHD7Q9BUK0 85 aa11.04□□□□□ -0.64
LIMS2-217ENST00000545738 SMIM2Q9BVW6 85 aa11.04□□□□□ -0.64
LIMS2-217ENST00000545738 PPP1R17O96001 155 aa11.04□□□□□ -0.64
LIMS2-217ENST00000545738 Q6ZR54 194 aa11.04□□□□□ -0.64
LIMS2-217ENST00000545738 OR10D4PQ8NGN7 298 aa11.04□□□□□ -0.64
LIMS2-217ENST00000545738 TRAV8-6A0A0B4J262 113 aa11.03□□□□□ -0.64
LIMS2-217ENST00000545738 LOC389332A0A1B0GUA5 103 aa11.03□□□□□ -0.64
LIMS2-217ENST00000545738 IGHV3-30P01768 117 aa11.03□□□□□ -0.64
LIMS2-217ENST00000545738 IGHV3-33P01772 117 aa11.03□□□□□ -0.64
LIMS2-217ENST00000545738 IGHV3-30-3P0DP02 117 aa11.03□□□□□ -0.64
LIMS2-217ENST00000545738 IGHV3-30-5P0DP03 117 aa11.03□□□□□ -0.64
LIMS2-217ENST00000545738 PMCHP20382 165 aa11.03□□□□□ -0.64
LIMS2-217ENST00000545738 RPL32P62910 135 aaKnown RBP11.03□□□□□ -0.64
LIMS2-217ENST00000545738 TRBV25-1A0A075B6N4 114 aa11.02□□□□□ -0.65
LIMS2-217ENST00000545738 IGHV1-24A0A0C4DH33 117 aa11.02□□□□□ -0.65
LIMS2-217ENST00000545738 NBDYA0A0U1RRE5 68 aa11.02□□□□□ -0.65
LIMS2-217ENST00000545738 VCYO14598 125 aa11.02□□□□□ -0.65
LIMS2-217ENST00000545738 MPV17L2Q567V2 206 aa11.02□□□□□ -0.65
LIMS2-217ENST00000545738 LINC01556Q5JQF7 62 aa11.02□□□□□ -0.65
LIMS2-217ENST00000545738 LAMTOR2Q9Y2Q5 125 aa11.02□□□□□ -0.65
LIMS2-217ENST00000545738 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.01□□□□□ -0.65
LIMS2-217ENST00000545738 IGKV2-29A2NJV5 120 aaPredicted RBP11.01□□□□□ -0.65
LIMS2-217ENST00000545738 ESDP10768 282 aa11.01□□□□□ -0.65
LIMS2-217ENST00000545738 AMTP48728 403 aa11.01□□□□□ -0.65
LIMS2-217ENST00000545738 GAGE6Q13070 117 aa11.01□□□□□ -0.65
LIMS2-217ENST00000545738 Q8N976 141 aa11.01□□□□□ -0.65
LIMS2-217ENST00000545738 CHCHD5Q9BSY4 110 aa11.01□□□□□ -0.65
LIMS2-217ENST00000545738 IFITM10A6NMD0 228 aa11.01□□□□□ -0.65
LIMS2-217ENST00000545738 JOSD1Q15040 202 aaPredicted RBP11.01□□□□□ -0.65
LIMS2-217ENST00000545738 HIST3H2BBQ8N257 126 aa11.01□□□□□ -0.65
LIMS2-217ENST00000545738 A6NJY4 79 aa11□□□□□ -0.65
LIMS2-217ENST00000545738 TRGC2P03986 189 aa11□□□□□ -0.65
LIMS2-217ENST00000545738 IFI27P40305 119 aaPredicted RBP11□□□□□ -0.65
LIMS2-217ENST00000545738 TMEM97Q5BJF2 176 aa11□□□□□ -0.65
LIMS2-217ENST00000545738 TMEM243Q9BU79 118 aa11□□□□□ -0.65
LIMS2-217ENST00000545738 MAP1LC3AQ9H492 121 aa10.99□□□□□ -0.65
LIMS2-217ENST00000545738 NDUFA6P56556 154 aa10.98□□□□□ -0.65
LIMS2-217ENST00000545738 IGLV4-60A0A075B6I1 120 aa10.98□□□□□ -0.65
LIMS2-217ENST00000545738 Q8N8P6 123 aa10.98□□□□□ -0.65
LIMS2-217ENST00000545738 C18orf32Q8TCD1 76 aa10.98□□□□□ -0.65
LIMS2-217ENST00000545738 URB1-AS1Q96HZ7 61 aa10.98□□□□□ -0.65
LIMS2-217ENST00000545738 KIR2DL4Q99706 377 aa10.98□□□□□ -0.65
LIMS2-217ENST00000545738 PRO1933Q9H354 126 aa10.98□□□□□ -0.65
LIMS2-217ENST00000545738 TMEM262E9PQX1 116 aa10.97□□□□□ -0.65
LIMS2-217ENST00000545738 RBX1P62877 108 aa10.97□□□□□ -0.65
LIMS2-217ENST00000545738 RPL39P62891 51 aaKnown RBP10.97□□□□□ -0.65
LIMS2-217ENST00000545738 DNAH11Q96DT5 4516 aa10.96□□□□□ -0.65
LIMS2-217ENST00000545738 EREGO14944 169 aa10.96□□□□□ -0.65
LIMS2-217ENST00000545738 FCER1GP30273 86 aa10.96□□□□□ -0.65
LIMS2-217ENST00000545738 C20orf203Q8NBC4 194 aa10.96□□□□□ -0.65
LIMS2-217ENST00000545738 PACRGQ96M98 296 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms