RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 F8VRH5 84 aa3.9□□□□□ -1.79
NPIPB3-214ENST00000545358 IGKCP01834 107 aa3.9□□□□□ -1.79
NPIPB3-214ENST00000545358 PRSS1P07477 247 aa3.9□□□□□ -1.79
NPIPB3-214ENST00000545358 HNRNPA3P51991 378 aaKnown RBP3.9□□□□□ -1.79
NPIPB3-214ENST00000545358 EGFEM1PQ0D2K5 195 aa3.9□□□□□ -1.79
NPIPB3-214ENST00000545358 MAJINQ3KP22 176 aa3.9□□□□□ -1.79
NPIPB3-214ENST00000545358 LINC00612Q8N6U2 182 aa3.9□□□□□ -1.79
NPIPB3-214ENST00000545358 BAALCQ8WXS3 180 aa3.9□□□□□ -1.79
NPIPB3-214ENST00000545358 PMCHL2Q9BQD1 86 aa3.9□□□□□ -1.79
NPIPB3-214ENST00000545358 NF1P21359 2839 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 TRBV7-3A0A075B6L6 115 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 TRGV2A0A075B6R0 118 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 TRBV6-4A0A1B0GX49 114 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 GAGE12BA1L429 117 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 IGIPA6NJ69 53 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 LYRM9A8MSI8 78 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 A8MZ25 164 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 GAGE7O76087 117 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 GAGE12FP0CL80 117 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 GAGE12GP0CL81 117 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 GAGE12IP0CL82 117 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 P0DMU3 169 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 FAM231AP0DMU4 169 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 FAM231CP0DMU5 169 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 IGHV4-30-4P0DP06 118 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 COX8AP10176 69 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 CRYBA4P53673 196 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 RPL36AP83881 106 aaKnown RBP3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 COTL1Q14019 142 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 LBHQ53QV2 105 aaPredicted RBP3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 PAPPA-AS1Q5QFB9 102 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 SLC25A34Q6PIV7 304 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 Q6ZSN1 163 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 DAZ4Q86SG3 579 aaKnown RBP3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 C20orf203Q8NBC4 194 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 RPL36ALQ969Q0 106 aaKnown RBP3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 C14orf144Q96I85 54 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 ZNF479Q96JC4 524 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 DAZ3Q9NR90 486 aaKnown RBP3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 SPANXA1Q9NS26 97 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 DKK2Q9UBU2 259 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 CHTOPQ9Y3Y2 248 aaKnown RBP3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 PYGO1Q9Y3Y4 419 aa3.89□□□□□ -1.79
NPIPB3-214ENST00000545358 TEX48A0A1B0GUV7 120 aa3.88□□□□□ -1.79
NPIPB3-214ENST00000545358 LINC00694P0DN24 101 aa3.88□□□□□ -1.79
NPIPB3-214ENST00000545358 MIFP14174 115 aa3.88□□□□□ -1.79
NPIPB3-214ENST00000545358 UBE2D3P61077 147 aa3.88□□□□□ -1.79
NPIPB3-214ENST00000545358 UBE2D2P62837 147 aa3.88□□□□□ -1.79
NPIPB3-214ENST00000545358 RPL39P62891 51 aaKnown RBP3.88□□□□□ -1.79
NPIPB3-214ENST00000545358 SMAGPQ0VAQ4 97 aa3.88□□□□□ -1.79
NPIPB3-214ENST00000545358 PMVKQ15126 192 aa3.88□□□□□ -1.79
NPIPB3-214ENST00000545358 DEFB135Q30KP9 77 aa3.88□□□□□ -1.79
NPIPB3-214ENST00000545358 PRADC1Q9BSG0 188 aa3.88□□□□□ -1.79
NPIPB3-214ENST00000545358 MRPL35Q9NZE8 188 aaKnown RBP3.88□□□□□ -1.79
NPIPB3-214ENST00000545358 MRPS16Q9Y3D3 137 aaKnown RBP3.88□□□□□ -1.79
NPIPB3-214ENST00000545358 BAHCC1Q9P281 2608 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 IGLV4-3A0A075B6K6 122 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 TRGV4A0A0C4DH28 118 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 PRSS29PA6NIE9 313 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 M0R143 59 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 DLEU1O43261 78 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 TMEM97Q5BJF2 176 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 ZC2HC1BQ5TFG8 222 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 SLC25A29Q8N8R3 303 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 Q8NAQ8 132 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 OR11H2Q8NH07 326 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 ZNRF2Q8NHG8 242 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 PHLDA1Q8WV24 401 aaPredicted RBP3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 RNF183Q96D59 192 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 CHCHD7Q9BUK0 85 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 TIMM21Q9BVV7 248 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 GTSF1LQ9H1H1 148 aa3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 SETD2Q9BYW2 2564 aaPredicted RBP3.87□□□□□ -1.79
NPIPB3-214ENST00000545358 IGLV4-69A0A075B6H9 119 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 IGHV4-28A0A0C4DH34 117 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 GAGE12JA6NER3 117 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 H7C423 109 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 SIVA1O15304 175 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 FGF6P10767 208 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 EMP1P54849 157 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 KRTAP10-11P60412 298 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 HERVK_113P61574 105 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 CTAG1AP78358 180 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 MRPS36P82909 103 aaKnown RBP3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 GAGE1Q13065 139 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 GAGE4Q13068 117 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 GAGE5Q13069 117 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 FHL2Q14192 279 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 GAGE13Q4V321 117 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 FAM222AQ5U5X8 452 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 NFE4Q86UQ8 179 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 BOD1L2Q8IYS8 172 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 STPG4Q8N801 248 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 AMELXQ99217 191 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 C2orf88Q9BSF0 95 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 CST9LQ9H4G1 147 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 HHLA3Q9XRX5 114 aa3.86□□□□□ -1.79
NPIPB3-214ENST00000545358 UBE2D4Q9Y2X8 147 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms