RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 AP5S1Q9NUS5 200 aa6.67□□□□□ -1.34
YBX3-215ENST00000544504 ICOSQ9Y6W8 199 aa6.67□□□□□ -1.34
YBX3-215ENST00000544504 GAGE12JA6NER3 117 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 GAS8-AS1O95177 125 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 P0DMU3 169 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 FAM231AP0DMU4 169 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 FAM231CP0DMU5 169 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 FCER1GP30273 86 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 IFI27P40305 119 aaPredicted RBP6.66□□□□□ -1.34
YBX3-215ENST00000544504 UBE2D3P61077 147 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 UBE2D2P62837 147 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 SMAGPQ0VAQ4 97 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 GAGE1Q13065 139 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 GAGE4Q13068 117 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 GAGE5Q13069 117 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 COTL1Q14019 142 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 GAGE13Q4V321 117 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 RNASEKQ6P5S7 137 aaKnown RBP6.66□□□□□ -1.34
YBX3-215ENST00000544504 NIT1Q86X76 327 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 C15orf53Q8NAA6 179 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 TMA7Q9Y2S6 64 aaKnown RBP6.66□□□□□ -1.34
YBX3-215ENST00000544504 PKHD1P08F94 4074 aa6.66□□□□□ -1.34
YBX3-215ENST00000544504 HERC1Q15751 4861 aa6.65□□□□□ -1.34
YBX3-215ENST00000544504 IGLV2-18A0A075B6J9 118 aa6.65□□□□□ -1.34
YBX3-215ENST00000544504 LINC01546A6NGU7 62 aa6.65□□□□□ -1.34
YBX3-215ENST00000544504 SERF1AO75920 110 aa6.65□□□□□ -1.34
YBX3-215ENST00000544504 ESDP10768 282 aa6.65□□□□□ -1.34
YBX3-215ENST00000544504 LAGE3Q14657 143 aa6.65□□□□□ -1.34
YBX3-215ENST00000544504 IQCJQ1A5X6 159 aa6.65□□□□□ -1.34
YBX3-215ENST00000544504 ATP6V0E2Q8NHE4 81 aa6.65□□□□□ -1.34
YBX3-215ENST00000544504 PHLDA1Q8WV24 401 aaPredicted RBP6.65□□□□□ -1.34
YBX3-215ENST00000544504 TMEM18Q96B42 140 aa6.65□□□□□ -1.34
YBX3-215ENST00000544504 VSIG2Q96IQ7 327 aa6.65□□□□□ -1.34
YBX3-215ENST00000544504 DYNC1H1Q14204 4646 aaKnown RBP6.64□□□□□ -1.35
YBX3-215ENST00000544504 A0A0J9YY99 117 aa6.64□□□□□ -1.35
YBX3-215ENST00000544504 LINC00694P0DN24 101 aa6.64□□□□□ -1.35
YBX3-215ENST00000544504 S100A2P29034 98 aa6.64□□□□□ -1.35
YBX3-215ENST00000544504 NEGR1Q7Z3B1 354 aa6.64□□□□□ -1.35
YBX3-215ENST00000544504 GTSF1LQ9H1H1 148 aa6.64□□□□□ -1.35
YBX3-215ENST00000544504 LOC100131303A0A0U1RQF7 123 aa6.63□□□□□ -1.35
YBX3-215ENST00000544504 NUPR2A6NF83 97 aa6.63□□□□□ -1.35
YBX3-215ENST00000544504 NUDT3O95989 172 aa6.63□□□□□ -1.35
YBX3-215ENST00000544504 TCTAP57738 103 aa6.63□□□□□ -1.35
YBX3-215ENST00000544504 TIRAPP58753 221 aa6.63□□□□□ -1.35
YBX3-215ENST00000544504 PKIAP61925 76 aa6.63□□□□□ -1.35
YBX3-215ENST00000544504 PACRGQ96M98 296 aaPredicted RBP6.63□□□□□ -1.35
YBX3-215ENST00000544504 FAT2Q9NYQ8 4349 aa6.63□□□□□ -1.35
YBX3-215ENST00000544504 KLK5Q9Y337 293 aaPredicted RBP6.63□□□□□ -1.35
YBX3-215ENST00000544504 DNAH2Q9P225 4427 aa6.63□□□□□ -1.35
YBX3-215ENST00000544504 TRBV25-1A0A075B6N4 114 aa6.62□□□□□ -1.35
YBX3-215ENST00000544504 IGHV1-24A0A0C4DH33 117 aa6.62□□□□□ -1.35
YBX3-215ENST00000544504 C5orf52A6NGY3 159 aa6.62□□□□□ -1.35
YBX3-215ENST00000544504 H7C423 109 aa6.62□□□□□ -1.35
YBX3-215ENST00000544504 TSHBP01222 138 aa6.62□□□□□ -1.35
YBX3-215ENST00000544504 HBDP02042 147 aa6.62□□□□□ -1.35
YBX3-215ENST00000544504 AMTP48728 403 aa6.62□□□□□ -1.35
YBX3-215ENST00000544504 Q9UF83 564 aa6.62□□□□□ -1.35
YBX3-215ENST00000544504 CYSLTR1Q9Y271 337 aa6.62□□□□□ -1.35
YBX3-215ENST00000544504 A0A096LPF7 62 aa6.61□□□□□ -1.35
YBX3-215ENST00000544504 SNRPEP62304 92 aaKnown RBP6.61□□□□□ -1.35
YBX3-215ENST00000544504 CEMP1Q6PRD7 247 aaPredicted RBP6.61□□□□□ -1.35
YBX3-215ENST00000544504 URB1-AS1Q96HZ7 61 aa6.61□□□□□ -1.35
YBX3-215ENST00000544504 TMEM243Q9BU79 118 aa6.61□□□□□ -1.35
YBX3-215ENST00000544504 DNAH11Q96DT5 4516 aa6.6□□□□□ -1.35
YBX3-215ENST00000544504 TRBV6-8A0A0A6YYG3 113 aa6.6□□□□□ -1.35
YBX3-215ENST00000544504 IGHV3-38A0A0C4DH36 116 aa6.6□□□□□ -1.35
YBX3-215ENST00000544504 UBE2L6O14933 153 aa6.6□□□□□ -1.35
YBX3-215ENST00000544504 NPSP0C0P6 89 aa6.6□□□□□ -1.35
YBX3-215ENST00000544504 BTF3P20290 206 aaKnown RBP6.6□□□□□ -1.35
YBX3-215ENST00000544504 LINC00310P59036 64 aa6.6□□□□□ -1.35
YBX3-215ENST00000544504 HIST3H2BBQ8N257 126 aa6.6□□□□□ -1.35
YBX3-215ENST00000544504 C20orf203Q8NBC4 194 aa6.6□□□□□ -1.35
YBX3-215ENST00000544504 HSPB8Q9UJY1 196 aa6.6□□□□□ -1.35
YBX3-215ENST00000544504 TRAV8-6A0A0B4J262 113 aa6.59□□□□□ -1.35
YBX3-215ENST00000544504 IGLL5B9A064 214 aa6.59□□□□□ -1.35
YBX3-215ENST00000544504 ATP5LO75964 103 aa6.59□□□□□ -1.35
YBX3-215ENST00000544504 LEPROTL1O95214 131 aa6.59□□□□□ -1.35
YBX3-215ENST00000544504 PAPPA-AS1Q5QFB9 102 aa6.59□□□□□ -1.35
YBX3-215ENST00000544504 LELP1Q5T871 98 aa6.59□□□□□ -1.35
YBX3-215ENST00000544504 C2orf66Q6UXQ4 117 aa6.59□□□□□ -1.35
YBX3-215ENST00000544504 TOMM6Q96B49 74 aa6.59□□□□□ -1.35
YBX3-215ENST00000544504 TIMM21Q9BVV7 248 aa6.59□□□□□ -1.35
YBX3-215ENST00000544504 ZNF25P17030 456 aaPredicted RBP6.58□□□□□ -1.36
YBX3-215ENST00000544504 CCL18P55774 89 aa6.58□□□□□ -1.36
YBX3-215ENST00000544504 NTM-AS1Q6ZSK4 140 aa6.58□□□□□ -1.36
YBX3-215ENST00000544504 ERASQ7Z444 233 aa6.58□□□□□ -1.36
YBX3-215ENST00000544504 TMEM141Q96I45 108 aa6.58□□□□□ -1.36
YBX3-215ENST00000544504 CHCHD5Q9BSY4 110 aa6.58□□□□□ -1.36
YBX3-215ENST00000544504 SPANXA1Q9NS26 97 aa6.58□□□□□ -1.36
YBX3-215ENST00000544504 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.57□□□□□ -1.36
YBX3-215ENST00000544504 NUPR1O60356 82 aa6.57□□□□□ -1.36
YBX3-215ENST00000544504 PDZD11Q5EBL8 140 aa6.57□□□□□ -1.36
YBX3-215ENST00000544504 AMMECR1LQ6DCA0 310 aa6.57□□□□□ -1.36
YBX3-215ENST00000544504 DGAT2L7PQ6IED9 249 aa6.57□□□□□ -1.36
YBX3-215ENST00000544504 LYPD5Q6UWN5 251 aa6.57□□□□□ -1.36
YBX3-215ENST00000544504 MRPL52Q86TS9 123 aaKnown RBP6.57□□□□□ -1.36
YBX3-215ENST00000544504 FAM19A2Q8N3H0 131 aa6.57□□□□□ -1.36
YBX3-215ENST00000544504 TMEM101Q96IK0 257 aa6.57□□□□□ -1.36
YBX3-215ENST00000544504 SCGB3A1Q96QR1 104 aa6.57□□□□□ -1.36
YBX3-215ENST00000544504 TIMM17AQ99595 171 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms