RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 COLCA2A8K830 154 aa9.87□□□□□ -0.83
TNFRSF1A-216ENST00000543995 IGHV3-30P01768 117 aa9.87□□□□□ -0.83
TNFRSF1A-216ENST00000543995 IGHV3-33P01772 117 aa9.87□□□□□ -0.83
TNFRSF1A-216ENST00000543995 DNAH10OSP0CZ25 163 aa9.87□□□□□ -0.83
TNFRSF1A-216ENST00000543995 IGHV3-30-3P0DP02 117 aa9.87□□□□□ -0.83
TNFRSF1A-216ENST00000543995 IGHV3-30-5P0DP03 117 aa9.87□□□□□ -0.83
TNFRSF1A-216ENST00000543995 IQCJQ1A5X6 159 aa9.87□□□□□ -0.83
TNFRSF1A-216ENST00000543995 TTC32Q5I0X7 151 aa9.87□□□□□ -0.83
TNFRSF1A-216ENST00000543995 KIR2DL4Q99706 377 aa9.87□□□□□ -0.83
TNFRSF1A-216ENST00000543995 TMEM243Q9BU79 118 aa9.87□□□□□ -0.83
TNFRSF1A-216ENST00000543995 SACSQ9NZJ4 4579 aa9.86□□□□□ -0.83
TNFRSF1A-216ENST00000543995 UBE2L6O14933 153 aa9.86□□□□□ -0.83
TNFRSF1A-216ENST00000543995 FCER1GP30273 86 aa9.86□□□□□ -0.83
TNFRSF1A-216ENST00000543995 LINC01556Q5JQF7 62 aa9.86□□□□□ -0.83
TNFRSF1A-216ENST00000543995 MAP1LC3AQ9H492 121 aa9.86□□□□□ -0.83
TNFRSF1A-216ENST00000543995 KMT2CQ8NEZ4 4911 aaKnown RBP9.85□□□□□ -0.83
TNFRSF1A-216ENST00000543995 A0A087WX48 190 aa9.85□□□□□ -0.83
TNFRSF1A-216ENST00000543995 LOC389332A0A1B0GUA5 103 aa9.85□□□□□ -0.83
TNFRSF1A-216ENST00000543995 TSHBP01222 138 aa9.85□□□□□ -0.83
TNFRSF1A-216ENST00000543995 NIT1Q86X76 327 aa9.85□□□□□ -0.83
TNFRSF1A-216ENST00000543995 SMIM2Q9BVW6 85 aa9.85□□□□□ -0.83
TNFRSF1A-216ENST00000543995 KMT2AQ03164 3969 aa9.84□□□□□ -0.83
TNFRSF1A-216ENST00000543995 PKIAP61925 76 aa9.84□□□□□ -0.83
TNFRSF1A-216ENST00000543995 RPL32P62910 135 aaKnown RBP9.84□□□□□ -0.83
TNFRSF1A-216ENST00000543995 GAGE6Q13070 117 aa9.84□□□□□ -0.83
TNFRSF1A-216ENST00000543995 Q8N3U1 123 aa9.84□□□□□ -0.83
TNFRSF1A-216ENST00000543995 C10orf126Q8N4M7 172 aa9.83□□□□□ -0.84
TNFRSF1A-216ENST00000543995 DNAH6Q9C0G6 4158 aa9.83□□□□□ -0.84
TNFRSF1A-216ENST00000543995 HYDINQ4G0P3 5121 aa9.83□□□□□ -0.84
TNFRSF1A-216ENST00000543995 K7EP13 123 aa9.82□□□□□ -0.84
TNFRSF1A-216ENST00000543995 Q6ZR54 194 aa9.82□□□□□ -0.84
TNFRSF1A-216ENST00000543995 KRTAP1-5Q9BYS1 174 aa9.82□□□□□ -0.84
TNFRSF1A-216ENST00000543995 TCAPO15273 167 aa9.82□□□□□ -0.84
TNFRSF1A-216ENST00000543995 RAB5AP20339 215 aa9.82□□□□□ -0.84
TNFRSF1A-216ENST00000543995 MPV17L2Q567V2 206 aa9.82□□□□□ -0.84
TNFRSF1A-216ENST00000543995 ALKBH7Q9BT30 221 aaPredicted RBP9.82□□□□□ -0.84
TNFRSF1A-216ENST00000543995 CHCHD7Q9BUK0 85 aa9.82□□□□□ -0.84
TNFRSF1A-216ENST00000543995 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF1A-216ENST00000543995 IGKV2-29A2NJV5 120 aaPredicted RBP9.81□□□□□ -0.84
TNFRSF1A-216ENST00000543995 PRSS47A8MTI9 375 aa9.81□□□□□ -0.84
TNFRSF1A-216ENST00000543995 AMMECR1LQ6DCA0 310 aa9.8□□□□□ -0.84
TNFRSF1A-216ENST00000543995 Q8N976 141 aa9.8□□□□□ -0.84
TNFRSF1A-216ENST00000543995 KLK12Q9UKR0 248 aa9.8□□□□□ -0.84
TNFRSF1A-216ENST00000543995 H7C423 109 aa9.79□□□□□ -0.84
TNFRSF1A-216ENST00000543995 ANGP03950 147 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-216ENST00000543995 ESDP10768 282 aa9.79□□□□□ -0.84
TNFRSF1A-216ENST00000543995 IFI27P40305 119 aaPredicted RBP9.79□□□□□ -0.84
TNFRSF1A-216ENST00000543995 RNASEKQ6P5S7 137 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-216ENST00000543995 Q8N8P6 123 aa9.79□□□□□ -0.84
TNFRSF1A-216ENST00000543995 NXT2Q9NPJ8 142 aaKnown RBP9.79□□□□□ -0.84
TNFRSF1A-216ENST00000543995 RBX1P62877 108 aa9.78□□□□□ -0.84
TNFRSF1A-216ENST00000543995 C1orf134Q5TEV5 83 aa9.78□□□□□ -0.84
TNFRSF1A-216ENST00000543995 C6orf223Q8N319 242 aa9.78□□□□□ -0.84
TNFRSF1A-216ENST00000543995 PRSS3P2Q8NHM4 247 aa9.78□□□□□ -0.84
TNFRSF1A-216ENST00000543995 RYR2Q92736 4967 aa9.77□□□□□ -0.84
TNFRSF1A-216ENST00000543995 IBA57-AS1B1ANH7 110 aa9.77□□□□□ -0.84
TNFRSF1A-216ENST00000543995 FGF6P10767 208 aa9.77□□□□□ -0.84
TNFRSF1A-216ENST00000543995 TMEM18Q96B42 140 aa9.77□□□□□ -0.84
TNFRSF1A-216ENST00000543995 Q9HAA7 133 aa9.77□□□□□ -0.84
TNFRSF1A-216ENST00000543995 A0A1B0GUV1 79 aa9.77□□□□□ -0.85
TNFRSF1A-216ENST00000543995 CRPP02741 224 aa9.77□□□□□ -0.85
TNFRSF1A-216ENST00000543995 TRGC2P03986 189 aa9.77□□□□□ -0.85
TNFRSF1A-216ENST00000543995 LAGE3Q14657 143 aa9.77□□□□□ -0.85
TNFRSF1A-216ENST00000543995 IGLV4-60A0A075B6I1 120 aa9.76□□□□□ -0.85
TNFRSF1A-216ENST00000543995 SMAGPQ0VAQ4 97 aa9.76□□□□□ -0.85
TNFRSF1A-216ENST00000543995 C20orf203Q8NBC4 194 aa9.76□□□□□ -0.85
TNFRSF1A-216ENST00000543995 UBE2WQ96B02 151 aa9.76□□□□□ -0.85
TNFRSF1A-216ENST00000543995 TMEM101Q96IK0 257 aa9.76□□□□□ -0.85
TNFRSF1A-216ENST00000543995 TRAV8-3A0A0A6YYJ7 113 aa9.75□□□□□ -0.85
TNFRSF1A-216ENST00000543995 K7EMI3 77 aa9.75□□□□□ -0.85
TNFRSF1A-216ENST00000543995 ZNF25P17030 456 aaPredicted RBP9.75□□□□□ -0.85
TNFRSF1A-216ENST00000543995 BTF3P20290 206 aaKnown RBP9.75□□□□□ -0.85
TNFRSF1A-216ENST00000543995 ORMDL2Q53FV1 153 aa9.75□□□□□ -0.85
TNFRSF1A-216ENST00000543995 DGAT2L7PQ6IED9 249 aa9.75□□□□□ -0.85
TNFRSF1A-216ENST00000543995 CLPSL2Q6UWE3 100 aa9.75□□□□□ -0.85
TNFRSF1A-216ENST00000543995 FA2HQ7L5A8 372 aa9.75□□□□□ -0.85
TNFRSF1A-216ENST00000543995 NFE4Q86UQ8 179 aa9.75□□□□□ -0.85
TNFRSF1A-216ENST00000543995 LINC00269Q8N2A0 174 aa9.75□□□□□ -0.85
TNFRSF1A-216ENST00000543995 OR5A1Q8NGJ0 315 aa9.75□□□□□ -0.85
TNFRSF1A-216ENST00000543995 C18orf32Q8TCD1 76 aa9.75□□□□□ -0.85
TNFRSF1A-216ENST00000543995 RPL39P62891 51 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-216ENST00000543995 Q0VG73 95 aa9.73□□□□□ -0.85
TNFRSF1A-216ENST00000543995 UBE2D4Q9Y2X8 147 aa9.73□□□□□ -0.85
TNFRSF1A-216ENST00000543995 REG3AQ06141 175 aa9.72□□□□□ -0.85
TNFRSF1A-216ENST00000543995 ENHOQ6UWT2 76 aa9.72□□□□□ -0.85
TNFRSF1A-216ENST00000543995 MRPL52Q86TS9 123 aaKnown RBP9.72□□□□□ -0.85
TNFRSF1A-216ENST00000543995 IGKV2D-24A0A075B6R9 120 aa9.72□□□□□ -0.85
TNFRSF1A-216ENST00000543995 IGKV3OR2-268A0A0C4DH90 116 aa9.72□□□□□ -0.85
TNFRSF1A-216ENST00000543995 RTL8CO15255 209 aa9.72□□□□□ -0.85
TNFRSF1A-216ENST00000543995 PSCAO43653 123 aa9.72□□□□□ -0.85
TNFRSF1A-216ENST00000543995 G0S2P27469 103 aa9.72□□□□□ -0.85
TNFRSF1A-216ENST00000543995 C2orf66Q6UXQ4 117 aa9.72□□□□□ -0.85
TNFRSF1A-216ENST00000543995 RMI2Q96E14 147 aa9.72□□□□□ -0.85
TNFRSF1A-216ENST00000543995 CYSLTR1Q9Y271 337 aa9.72□□□□□ -0.85
TNFRSF1A-216ENST00000543995 RAB5BP61020 215 aa9.71□□□□□ -0.86
TNFRSF1A-216ENST00000543995 MIAQ16674 131 aa9.71□□□□□ -0.86
TNFRSF1A-216ENST00000543995 SPANXA1Q9NS26 97 aa9.71□□□□□ -0.86
TNFRSF1A-216ENST00000543995 AP5S1Q9NUS5 200 aa9.71□□□□□ -0.86
TNFRSF1A-216ENST00000543995 PRR34Q9NV39 138 aa9.71□□□□□ -0.86
TNFRSF1A-216ENST00000543995 CSDC2Q9Y534 153 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms