RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 XGP55808 180 aa14.63□□□□□ -0.07
SUDS3-204ENST00000543473 MIR7-3HGQ8N6C7 128 aa14.63□□□□□ -0.07
SUDS3-204ENST00000543473 NRACQ8N912 160 aa14.62□□□□□ -0.07
SUDS3-204ENST00000543473 TMEM61Q8N0U2 210 aa14.62□□□□□ -0.07
SUDS3-204ENST00000543473 ODF3BA8MYP8 253 aa14.62□□□□□ -0.07
SUDS3-204ENST00000543473 IGHG2P01859 326 aa14.62□□□□□ -0.07
SUDS3-204ENST00000543473 TRIAP1O43715 76 aa14.61□□□□□ -0.07
SUDS3-204ENST00000543473 P0DMU3 169 aa14.61□□□□□ -0.07
SUDS3-204ENST00000543473 FAM231AP0DMU4 169 aa14.61□□□□□ -0.07
SUDS3-204ENST00000543473 FAM231CP0DMU5 169 aa14.61□□□□□ -0.07
SUDS3-204ENST00000543473 TMEM223A0PJW6 202 aa14.61□□□□□ -0.07
SUDS3-204ENST00000543473 COX7A2LO14548 114 aa14.61□□□□□ -0.07
SUDS3-204ENST00000543473 PSMB8P28062 276 aa14.61□□□□□ -0.07
SUDS3-204ENST00000543473 JMJD7-PLA2G4BH0Y9G9 81 aa14.6□□□□□ -0.07
SUDS3-204ENST00000543473 DSCAMO60469 2012 aa14.6□□□□□ -0.07
SUDS3-204ENST00000543473 NKAPP1Q8N9T2 125 aa14.6□□□□□ -0.07
SUDS3-204ENST00000543473 HHLA3Q9XRX5 114 aa14.6□□□□□ -0.07
SUDS3-204ENST00000543473 ZFAND3Q9H8U3 227 aa14.6□□□□□ -0.07
SUDS3-204ENST00000543473 ZFAND2AQ8N6M9 145 aa14.59□□□□□ -0.07
SUDS3-204ENST00000543473 UQCRQO14949 82 aa14.59□□□□□ -0.07
SUDS3-204ENST00000543473 TRBV30A0A0K0K1B3 111 aa14.59□□□□□ -0.07
SUDS3-204ENST00000543473 CLUHP3Q96NS8 147 aa14.59□□□□□ -0.07
SUDS3-204ENST00000543473 SORL1Q92673 2214 aa14.59□□□□□ -0.07
SUDS3-204ENST00000543473 IGHV3-30P01768 117 aa14.59□□□□□ -0.07
SUDS3-204ENST00000543473 IGHV3-30-5P0DP03 117 aa14.59□□□□□ -0.07
SUDS3-204ENST00000543473 IGHV4OR15-8A0A075B7B6 117 aa14.58□□□□□ -0.07
SUDS3-204ENST00000543473 A0A087WW49 117 aa14.58□□□□□ -0.07
SUDS3-204ENST00000543473 C14orf132Q9NPU4 83 aa14.58□□□□□ -0.07
SUDS3-204ENST00000543473 C1orf43Q9BWL3 253 aa14.58□□□□□ -0.08
SUDS3-204ENST00000543473 IGLV4-3A0A075B6K6 122 aa14.58□□□□□ -0.08
SUDS3-204ENST00000543473 C20orf173Q96LM9 149 aa14.58□□□□□ -0.08
SUDS3-204ENST00000543473 MRPS12O15235 138 aaKnown RBP14.57□□□□□ -0.08
SUDS3-204ENST00000543473 Q6ZQT7 251 aa14.57□□□□□ -0.08
SUDS3-204ENST00000543473 C11orf21Q9P2W6 132 aa14.57□□□□□ -0.08
SUDS3-204ENST00000543473 PCNTO95613 3336 aa14.57□□□□□ -0.08
SUDS3-204ENST00000543473 LY6LH3BQJ8 138 aa14.57□□□□□ -0.08
SUDS3-204ENST00000543473 hADV29S1A0JD25 119 aa14.56□□□□□ -0.08
SUDS3-204ENST00000543473 HIST2H2BDQ6DRA6 164 aa14.56□□□□□ -0.08
SUDS3-204ENST00000543473 CDKN2A-AS1Q9UH64 79 aa14.56□□□□□ -0.08
SUDS3-204ENST00000543473 DEFB121Q5J5C9 76 aa14.55□□□□□ -0.08
SUDS3-204ENST00000543473 EML5Q05BV3 1969 aa14.55□□□□□ -0.08
SUDS3-204ENST00000543473 LMO4P61968 165 aa14.55□□□□□ -0.08
SUDS3-204ENST00000543473 CNFNQ9BYD5 112 aa14.54□□□□□ -0.08
SUDS3-204ENST00000543473 IGLV10-54A0A075B6I4 117 aa14.53□□□□□ -0.08
SUDS3-204ENST00000543473 TRBV27A0A0K0K1C4 114 aa14.52□□□□□ -0.08
SUDS3-204ENST00000543473 Q6ZS46 218 aa14.52□□□□□ -0.08
SUDS3-204ENST00000543473 M0QY20 66 aa14.52□□□□□ -0.08
SUDS3-204ENST00000543473 ARHGAP32A7KAX9 2087 aa14.52□□□□□ -0.09
SUDS3-204ENST00000543473 CCL24O00175 119 aa14.52□□□□□ -0.09
SUDS3-204ENST00000543473 GYPEP15421 78 aa14.52□□□□□ -0.09
SUDS3-204ENST00000543473 C16orf74Q96GX8 76 aa14.52□□□□□ -0.09
SUDS3-204ENST00000543473 TLN2Q9Y4G6 2542 aa14.51□□□□□ -0.09
SUDS3-204ENST00000543473 EBI3Q14213 229 aa14.51□□□□□ -0.09
SUDS3-204ENST00000543473 IGHV4-4A0A075B6R2 117 aa14.51□□□□□ -0.09
SUDS3-204ENST00000543473 SDIM1Q6ZPB5 146 aa14.51□□□□□ -0.09
SUDS3-204ENST00000543473 C3orf22Q8N5N4 141 aa14.5□□□□□ -0.09
SUDS3-204ENST00000543473 LINC00308Q8TCZ7 52 aa14.5□□□□□ -0.09
SUDS3-204ENST00000543473 ZMAT4Q9H898 229 aa14.5□□□□□ -0.09
SUDS3-204ENST00000543473 A0A096LNJ9 63 aa14.49□□□□□ -0.09
SUDS3-204ENST00000543473 CCDC179H3BU77 68 aa14.49□□□□□ -0.09
SUDS3-204ENST00000543473 TMEM256-PLSCR3K7ERE1 68 aa14.49□□□□□ -0.09
SUDS3-204ENST00000543473 ODF3Q96PU9 254 aa14.49□□□□□ -0.09
SUDS3-204ENST00000543473 LINC00467Q9BRT7 94 aa14.49□□□□□ -0.09
SUDS3-204ENST00000543473 TRBV10-1A0A0K0K1A3 114 aa14.49□□□□□ -0.09
SUDS3-204ENST00000543473 CITED2Q99967 270 aaPredicted RBP14.48□□□□□ -0.09
SUDS3-204ENST00000543473 PRR9Q5T870 116 aa14.48□□□□□ -0.09
SUDS3-204ENST00000543473 TRAV23DV6A0A075B6W5 121 aa14.47□□□□□ -0.09
SUDS3-204ENST00000543473 TRBV6-5A0A0K0K1A5 114 aa14.47□□□□□ -0.09
SUDS3-204ENST00000543473 FSTL3O95633 263 aa14.47□□□□□ -0.09
SUDS3-204ENST00000543473 RNASE3P12724 160 aaKnown RBP14.47□□□□□ -0.09
SUDS3-204ENST00000543473 CDK2AP2O75956 126 aa14.47□□□□□ -0.09
SUDS3-204ENST00000543473 A6NDX4 124 aa14.47□□□□□ -0.09
SUDS3-204ENST00000543473 DEFB105AQ8NG35 78 aa14.47□□□□□ -0.09
SUDS3-204ENST00000543473 TMEM89A2RUT3 159 aa14.46□□□□□ -0.09
SUDS3-204ENST00000543473 POLR2KP53803 58 aaKnown RBP14.46□□□□□ -0.09
SUDS3-204ENST00000543473 USP9XQ93008 2570 aaPredicted RBP14.46□□□□□ -0.1
SUDS3-204ENST00000543473 K7EQG2 157 aa14.45□□□□□ -0.1
SUDS3-204ENST00000543473 APOC4P55056 127 aa14.45□□□□□ -0.1
SUDS3-204ENST00000543473 USP9YO00507 2555 aaPredicted RBP14.45□□□□□ -0.1
SUDS3-204ENST00000543473 NCR3O14931 201 aa14.44□□□□□ -0.1
SUDS3-204ENST00000543473 C20orf197Q8N268 126 aa14.44□□□□□ -0.1
SUDS3-204ENST00000543473 A8MZ25 164 aa14.44□□□□□ -0.1
SUDS3-204ENST00000543473 LST1O00453 97 aa14.44□□□□□ -0.1
SUDS3-204ENST00000543473 IMUPQ9GZP8 106 aa14.44□□□□□ -0.1
SUDS3-204ENST00000543473 ZNF843Q8N446 348 aa14.44□□□□□ -0.1
SUDS3-204ENST00000543473 NREPQ16612 68 aa14.43□□□□□ -0.1
SUDS3-204ENST00000543473 NDUFA1O15239 70 aa14.43□□□□□ -0.1
SUDS3-204ENST00000543473 FUSP35637 526 aaKnown RBP eCLIP14.43□□□□□ -0.1
SUDS3-204ENST00000543473 UBE2D1P51668 147 aa14.43□□□□□ -0.1
SUDS3-204ENST00000543473 CDSNQ15517 529 aa14.43□□□□□ -0.1
SUDS3-204ENST00000543473 PIK3CD-AS1Q5SR53 167 aa14.43□□□□□ -0.1
SUDS3-204ENST00000543473 TMEM263Q8WUH6 116 aaKnown RBP14.43□□□□□ -0.1
SUDS3-204ENST00000543473 PYGO1Q9Y3Y4 419 aa14.43□□□□□ -0.1
SUDS3-204ENST00000543473 PSCAO43653 123 aa14.42□□□□□ -0.1
SUDS3-204ENST00000543473 C11orf71Q6IPW1 123 aa14.42□□□□□ -0.1
SUDS3-204ENST00000543473 NDUFA7O95182 113 aa14.41□□□□□ -0.1
SUDS3-204ENST00000543473 H3BQ85 93 aa14.41□□□□□ -0.1
SUDS3-204ENST00000543473 TSHBP01222 138 aa14.41□□□□□ -0.1
SUDS3-204ENST00000543473 CXCL5P42830 114 aa14.41□□□□□ -0.1
SUDS3-204ENST00000543473 TIRAPP58753 221 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms