RNA–Protein interactions for RNA: ENST00000543368.1

NPIPB3-212, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-212ENST00000543368 GATD1Q8NB37 220 aa6.79□□□□□ -1.32
NPIPB3-212ENST00000543368 TMEM191AQ9H0A3 160 aa6.79□□□□□ -1.32
NPIPB3-212ENST00000543368 NAT8BQ9UHF3 227 aa6.79□□□□□ -1.32
NPIPB3-212ENST00000543368 DYNC1H1Q14204 4646 aaKnown RBP6.78□□□□□ -1.32
NPIPB3-212ENST00000543368 PKHD1P08F94 4074 aa6.78□□□□□ -1.32
NPIPB3-212ENST00000543368 TRBV6-5A0A0K0K1A5 114 aa6.78□□□□□ -1.32
NPIPB3-212ENST00000543368 A0A1B0GW15 77 aa6.78□□□□□ -1.32
NPIPB3-212ENST00000543368 XGP55808 180 aa6.78□□□□□ -1.32
NPIPB3-212ENST00000543368 REG3AQ06141 175 aa6.78□□□□□ -1.32
NPIPB3-212ENST00000543368 LINC00269Q8N2A0 174 aa6.78□□□□□ -1.32
NPIPB3-212ENST00000543368 CLRN3Q8NCR9 226 aa6.78□□□□□ -1.32
NPIPB3-212ENST00000543368 ISOC2Q96AB3 205 aa6.78□□□□□ -1.32
NPIPB3-212ENST00000543368 MRAP2Q96G30 205 aa6.78□□□□□ -1.32
NPIPB3-212ENST00000543368 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.77□□□□□ -1.33
NPIPB3-212ENST00000543368 FAM229AH3BQW9 127 aa6.77□□□□□ -1.33
NPIPB3-212ENST00000543368 I3L3M4 83 aa6.77□□□□□ -1.33
NPIPB3-212ENST00000543368 LECT2O14960 151 aa6.77□□□□□ -1.33
NPIPB3-212ENST00000543368 APCSP02743 223 aa6.77□□□□□ -1.33
NPIPB3-212ENST00000543368 S100A8P05109 93 aa6.77□□□□□ -1.33
NPIPB3-212ENST00000543368 FUSP35637 526 aaKnown RBP eCLIP6.77□□□□□ -1.33
NPIPB3-212ENST00000543368 RAB14P61106 215 aa6.77□□□□□ -1.33
NPIPB3-212ENST00000543368 SMAGPQ0VAQ4 97 aa6.77□□□□□ -1.33
NPIPB3-212ENST00000543368 WFDC2Q14508 124 aa6.77□□□□□ -1.33
NPIPB3-212ENST00000543368 ADIRFQ15847 76 aa6.77□□□□□ -1.33
NPIPB3-212ENST00000543368 AMMECR1LQ6DCA0 310 aa6.77□□□□□ -1.33
NPIPB3-212ENST00000543368 ST20Q9HBF5 79 aa6.77□□□□□ -1.33
NPIPB3-212ENST00000543368 V9GYV3 84 aa6.77□□□□□ -1.33
NPIPB3-212ENST00000543368 TRAV26-2A0A0B4J265 109 aa6.76□□□□□ -1.33
NPIPB3-212ENST00000543368 SDHAF1A6NFY7 115 aa6.76□□□□□ -1.33
NPIPB3-212ENST00000543368 HLA-DQA1P01909 254 aa6.76□□□□□ -1.33
NPIPB3-212ENST00000543368 ZNF25P17030 456 aaPredicted RBP6.76□□□□□ -1.33
NPIPB3-212ENST00000543368 PMCHP20382 165 aa6.76□□□□□ -1.33
NPIPB3-212ENST00000543368 RPL23P62829 140 aaKnown RBP6.76□□□□□ -1.33
NPIPB3-212ENST00000543368 DGAT2L7PQ6IED9 249 aa6.76□□□□□ -1.33
NPIPB3-212ENST00000543368 RYR1P21817 5038 aa6.75□□□□□ -1.33
NPIPB3-212ENST00000543368 PPP1R2P9O14990 202 aa6.75□□□□□ -1.33
NPIPB3-212ENST00000543368 CFAP161Q6P656 301 aa6.75□□□□□ -1.33
NPIPB3-212ENST00000543368 C20orf203Q8NBC4 194 aa6.75□□□□□ -1.33
NPIPB3-212ENST00000543368 TMEM101Q96IK0 257 aa6.75□□□□□ -1.33
NPIPB3-212ENST00000543368 BTF3L4Q96K17 158 aa6.75□□□□□ -1.33
NPIPB3-212ENST00000543368 SMIM27A0A1W2PRY6 76 aa6.74□□□□□ -1.33
NPIPB3-212ENST00000543368 LINC00862A6NCI5 91 aa6.74□□□□□ -1.33
NPIPB3-212ENST00000543368 USP17L23D6RBM5 183 aa6.74□□□□□ -1.33
NPIPB3-212ENST00000543368 TCAPO15273 167 aa6.74□□□□□ -1.33
NPIPB3-212ENST00000543368 RAB4AP20338 218 aa6.74□□□□□ -1.33
NPIPB3-212ENST00000543368 Q6ZSA8 131 aa6.74□□□□□ -1.33
NPIPB3-212ENST00000543368 NUP35Q8NFH5 326 aa6.74□□□□□ -1.33
NPIPB3-212ENST00000543368 RPL39LQ96EH5 51 aaKnown RBP6.74□□□□□ -1.33
NPIPB3-212ENST00000543368 KRTAP17-1Q9BYP8 105 aa6.74□□□□□ -1.33
NPIPB3-212ENST00000543368 IGLV4-60A0A075B6I1 120 aa6.73□□□□□ -1.33
NPIPB3-212ENST00000543368 TRBV27A0A0K0K1C4 114 aa6.73□□□□□ -1.33
NPIPB3-212ENST00000543368 F8W036 122 aa6.73□□□□□ -1.33
NPIPB3-212ENST00000543368 VCYO14598 125 aa6.73□□□□□ -1.33
NPIPB3-212ENST00000543368 PNRC1Q12796 327 aaPredicted RBP6.73□□□□□ -1.33
NPIPB3-212ENST00000543368 Q5VSD8 79 aa6.73□□□□□ -1.33
NPIPB3-212ENST00000543368 RNASEKQ6P5S7 137 aaKnown RBP6.73□□□□□ -1.33
NPIPB3-212ENST00000543368 CLPSL2Q6UWE3 100 aa6.73□□□□□ -1.33
NPIPB3-212ENST00000543368 KRTAP4-5Q9BYR2 181 aa6.73□□□□□ -1.33
NPIPB3-212ENST00000543368 AP5S1Q9NUS5 200 aa6.73□□□□□ -1.33
NPIPB3-212ENST00000543368 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.72□□□□□ -1.33
NPIPB3-212ENST00000543368 PLA2G1BP04054 148 aaKnown RBP6.72□□□□□ -1.33
NPIPB3-212ENST00000543368 FGF6P10767 208 aa6.72□□□□□ -1.33
NPIPB3-212ENST00000543368 AMN1Q8IY45 258 aa6.72□□□□□ -1.33
NPIPB3-212ENST00000543368 TMEM18Q96B42 140 aa6.72□□□□□ -1.33
NPIPB3-212ENST00000543368 RNF185Q96GF1 192 aa6.72□□□□□ -1.33
NPIPB3-212ENST00000543368 KIR2DL4Q99706 377 aa6.72□□□□□ -1.33
NPIPB3-212ENST00000543368 LRP1BQ9NZR2 4599 aa6.72□□□□□ -1.33
NPIPB3-212ENST00000543368 C7orf77A4D0Y5 90 aa6.71□□□□□ -1.34
NPIPB3-212ENST00000543368 C9JQL5 133 aa6.71□□□□□ -1.34
NPIPB3-212ENST00000543368 INAFM2P0DMQ5 153 aa6.71□□□□□ -1.34
NPIPB3-212ENST00000543368 FCER1GP30273 86 aa6.71□□□□□ -1.34
NPIPB3-212ENST00000543368 POLR2KP53803 58 aaKnown RBP6.71□□□□□ -1.34
NPIPB3-212ENST00000543368 HBBP68871 147 aa6.71□□□□□ -1.34
NPIPB3-212ENST00000543368 FAM104BQ5XKR9 115 aa6.71□□□□□ -1.34
NPIPB3-212ENST00000543368 KRTAP26-1Q6PEX3 210 aa6.71□□□□□ -1.34
NPIPB3-212ENST00000543368 ATP5L2Q7Z4Y8 100 aa6.71□□□□□ -1.34
NPIPB3-212ENST00000543368 MRPL52Q86TS9 123 aaKnown RBP6.71□□□□□ -1.34
NPIPB3-212ENST00000543368 OR5A1Q8NGJ0 315 aa6.71□□□□□ -1.34
NPIPB3-212ENST00000543368 C20orf78Q9BR46 151 aa6.71□□□□□ -1.34
NPIPB3-212ENST00000543368 IGLV10-54A0A075B6I4 117 aa6.7□□□□□ -1.34
NPIPB3-212ENST00000543368 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.7□□□□□ -1.34
NPIPB3-212ENST00000543368 IGKV2-29A2NJV5 120 aaPredicted RBP6.7□□□□□ -1.34
NPIPB3-212ENST00000543368 CCL25O15444 150 aa6.7□□□□□ -1.34
NPIPB3-212ENST00000543368 PPBPP02775 128 aa6.7□□□□□ -1.34
NPIPB3-212ENST00000543368 PRSS1P07477 247 aa6.7□□□□□ -1.34
NPIPB3-212ENST00000543368 ESDP10768 282 aa6.7□□□□□ -1.34
NPIPB3-212ENST00000543368 SUMO2P61956 95 aaKnown RBP6.7□□□□□ -1.34
NPIPB3-212ENST00000543368 CNBPP62633 177 aaKnown RBP6.7□□□□□ -1.34
NPIPB3-212ENST00000543368 RPL32P62910 135 aaKnown RBP6.7□□□□□ -1.34
NPIPB3-212ENST00000543368 SRSF3P84103 164 aaKnown RBP6.7□□□□□ -1.34
NPIPB3-212ENST00000543368 C9orf163Q8N9P6 203 aa6.7□□□□□ -1.34
NPIPB3-212ENST00000543368 CHAC1Q9BUX1 264 aa6.7□□□□□ -1.34
NPIPB3-212ENST00000543368 FAM30AQ9NZY2 134 aa6.7□□□□□ -1.34
NPIPB3-212ENST00000543368 PKIGQ9Y2B9 76 aa6.7□□□□□ -1.34
NPIPB3-212ENST00000543368 DNAH5Q8TE73 4624 aa6.69□□□□□ -1.34
NPIPB3-212ENST00000543368 hDV102S1A0JD36 115 aa6.69□□□□□ -1.34
NPIPB3-212ENST00000543368 PHOX2AO14813 284 aa6.69□□□□□ -1.34
NPIPB3-212ENST00000543368 TSHBP01222 138 aa6.69□□□□□ -1.34
NPIPB3-212ENST00000543368 SMR3BP02814 79 aaPredicted RBP6.69□□□□□ -1.34
NPIPB3-212ENST00000543368 MT-ND4LP03901 98 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms