RNA–Protein interactions for RNA: ENST00000543103.1

NLRC5-223, Transcript of NLR family CARD domain containing 5, human

TSL 2

Gene NLRC5, Length 1,896 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NLRC5-223	ENST00000543103	PRSS29P	A6NIE9	313 aa		11.72	□□□□□ -0.53
NLRC5-223	ENST00000543103	OPRPN	Q99935	248 aa	Predicted RBP	11.72	□□□□□ -0.53
NLRC5-223	ENST00000543103	TRBV7-3	A0A075B6L6	115 aa		11.72	□□□□□ -0.53
NLRC5-223	ENST00000543103		F8VRH5	84 aa		11.72	□□□□□ -0.53
NLRC5-223	ENST00000543103	CTAG1A	P78358	180 aa		11.72	□□□□□ -0.53
NLRC5-223	ENST00000543103	TMEM141	Q96I45	108 aa		11.72	□□□□□ -0.53
NLRC5-223	ENST00000543103	CHCHD7	Q9BUK0	85 aa		11.72	□□□□□ -0.53
NLRC5-223	ENST00000543103	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.72	□□□□□ -0.53
NLRC5-223	ENST00000543103	TRBV10-1	A0A0K0K1A3	114 aa		11.71	□□□□□ -0.53
NLRC5-223	ENST00000543103	DEFB130B	P0DP73	79 aa		11.71	□□□□□ -0.53
NLRC5-223	ENST00000543103	DEFB130A	P0DP74	79 aa		11.71	□□□□□ -0.53
NLRC5-223	ENST00000543103	LINC00612	Q8N6U2	182 aa		11.71	□□□□□ -0.53
NLRC5-223	ENST00000543103	HNRNPA3	P51991	378 aa	Known RBP	11.7	□□□□□ -0.54
NLRC5-223	ENST00000543103	EGFEM1P	Q0D2K5	195 aa		11.7	□□□□□ -0.54
NLRC5-223	ENST00000543103	OR11H2	Q8NH07	326 aa		11.7	□□□□□ -0.54
NLRC5-223	ENST00000543103	SNHG12	Q9BXW3	62 aa		11.7	□□□□□ -0.54
NLRC5-223	ENST00000543103	EREG	O14944	169 aa		11.7	□□□□□ -0.54
NLRC5-223	ENST00000543103	COX8A	P10176	69 aa		11.7	□□□□□ -0.54
NLRC5-223	ENST00000543103	FHL2	Q14192	279 aa		11.7	□□□□□ -0.54
NLRC5-223	ENST00000543103	SLC25A34	Q6PIV7	304 aa		11.7	□□□□□ -0.54
NLRC5-223	ENST00000543103	DEFB4A	O15263	64 aa		11.69	□□□□□ -0.54
NLRC5-223	ENST00000543103	CIDEA	O60543	219 aa		11.69	□□□□□ -0.54
NLRC5-223	ENST00000543103	PLN	P26678	52 aa		11.69	□□□□□ -0.54
NLRC5-223	ENST00000543103	RPL36A	P83881	106 aa	Known RBP	11.69	□□□□□ -0.54
NLRC5-223	ENST00000543103	PMVK	Q15126	192 aa		11.69	□□□□□ -0.54
NLRC5-223	ENST00000543103	RPL36AL	Q969Q0	106 aa	Known RBP	11.69	□□□□□ -0.54
NLRC5-223	ENST00000543103	FAM104A	Q969W3	186 aa		11.69	□□□□□ -0.54
NLRC5-223	ENST00000543103	CST9L	Q9H4G1	147 aa		11.69	□□□□□ -0.54
NLRC5-223	ENST00000543103	ZMAT5	Q9UDW3	170 aa	Known RBP	11.69	□□□□□ -0.54
NLRC5-223	ENST00000543103	ANK2	Q01484	3957 aa		11.69	□□□□□ -0.54
NLRC5-223	ENST00000543103	IGKV2D-26	A0A0A0MRZ7	120 aa		11.68	□□□□□ -0.54
NLRC5-223	ENST00000543103	TRGV4	A0A0C4DH28	118 aa		11.68	□□□□□ -0.54
NLRC5-223	ENST00000543103	LOC100131303	A0A0U1RQF7	123 aa		11.68	□□□□□ -0.54
NLRC5-223	ENST00000543103	TRBV6-4	A0A1B0GX49	114 aa		11.68	□□□□□ -0.54
NLRC5-223	ENST00000543103	GAGE12J	A6NER3	117 aa		11.68	□□□□□ -0.54
NLRC5-223	ENST00000543103	GAGE1	Q13065	139 aa		11.68	□□□□□ -0.54
NLRC5-223	ENST00000543103	GAGE4	Q13068	117 aa		11.68	□□□□□ -0.54
NLRC5-223	ENST00000543103	GAGE5	Q13069	117 aa		11.68	□□□□□ -0.54
NLRC5-223	ENST00000543103	COTL1	Q14019	142 aa		11.68	□□□□□ -0.54
NLRC5-223	ENST00000543103	GAGE13	Q4V321	117 aa		11.68	□□□□□ -0.54
NLRC5-223	ENST00000543103	FGF6	P10767	208 aa		11.68	□□□□□ -0.54
NLRC5-223	ENST00000543103	UBE2D3	P61077	147 aa		11.68	□□□□□ -0.54
NLRC5-223	ENST00000543103	UBE2D2	P62837	147 aa		11.68	□□□□□ -0.54
NLRC5-223	ENST00000543103	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.68	□□□□□ -0.54
NLRC5-223	ENST00000543103	IGLV4-69	A0A075B6H9	119 aa		11.67	□□□□□ -0.54
NLRC5-223	ENST00000543103	IGLV4-3	A0A075B6K6	122 aa		11.67	□□□□□ -0.54
NLRC5-223	ENST00000543103	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.67	□□□□□ -0.54
NLRC5-223	ENST00000543103	IGHV4-28	A0A0C4DH34	117 aa		11.67	□□□□□ -0.54
NLRC5-223	ENST00000543103	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.67	□□□□□ -0.54
NLRC5-223	ENST00000543103	FAM222A	Q5U5X8	452 aa		11.67	□□□□□ -0.54
NLRC5-223	ENST00000543103		G3V4G9	280 aa		11.66	□□□□□ -0.54
NLRC5-223	ENST00000543103	NMU	P48645	174 aa		11.66	□□□□□ -0.54
NLRC5-223	ENST00000543103	NTM-AS1	Q6ZSK4	140 aa		11.66	□□□□□ -0.54
NLRC5-223	ENST00000543103	PCP2	Q8IVA1	136 aa		11.66	□□□□□ -0.54
NLRC5-223	ENST00000543103		Q8NAQ8	132 aa		11.66	□□□□□ -0.54
NLRC5-223	ENST00000543103	RNF183	Q96D59	192 aa		11.66	□□□□□ -0.54
NLRC5-223	ENST00000543103	MRPS16	Q9Y3D3	137 aa	Known RBP	11.66	□□□□□ -0.54
NLRC5-223	ENST00000543103	PYGO1	Q9Y3Y4	419 aa		11.66	□□□□□ -0.54
NLRC5-223	ENST00000543103		M0R143	59 aa		11.66	□□□□□ -0.54
NLRC5-223	ENST00000543103	DAZ4	Q86SG3	579 aa	Known RBP	11.65	□□□□□ -0.54
NLRC5-223	ENST00000543103	BOD1L2	Q8IYS8	172 aa		11.65	□□□□□ -0.54
NLRC5-223	ENST00000543103	DAZ3	Q9NR90	486 aa	Known RBP	11.65	□□□□□ -0.54
NLRC5-223	ENST00000543103	UBE2D4	Q9Y2X8	147 aa		11.65	□□□□□ -0.54
NLRC5-223	ENST00000543103	C11orf86	A6NJI1	115 aa		11.64	□□□□□ -0.55
NLRC5-223	ENST00000543103	LYRM9	A8MSI8	78 aa		11.64	□□□□□ -0.55
NLRC5-223	ENST00000543103	TTTY13	Q9BZ97	58 aa		11.64	□□□□□ -0.55
NLRC5-223	ENST00000543103	C2orf91	Q6ZV80	131 aa		11.63	□□□□□ -0.55
NLRC5-223	ENST00000543103	DNAH3	Q8TD57	4116 aa		11.63	□□□□□ -0.55
NLRC5-223	ENST00000543103	MIF	P14174	115 aa		11.63	□□□□□ -0.55
NLRC5-223	ENST00000543103		A8MZ25	164 aa		11.62	□□□□□ -0.55
NLRC5-223	ENST00000543103	RNASE13	Q5GAN3	156 aa	Known RBP	11.62	□□□□□ -0.55
NLRC5-223	ENST00000543103	MRPL52	Q86TS9	123 aa	Known RBP	11.62	□□□□□ -0.55
NLRC5-223	ENST00000543103	CELA1	Q9UNI1	258 aa		11.62	□□□□□ -0.55
NLRC5-223	ENST00000543103	AMELX	Q99217	191 aa		11.61	□□□□□ -0.55
NLRC5-223	ENST00000543103	PRADC1	Q9BSG0	188 aa		11.61	□□□□□ -0.55
NLRC5-223	ENST00000543103	VCX2	Q9H322	139 aa		11.61	□□□□□ -0.55
NLRC5-223	ENST00000543103	LINC00694	P0DN24	101 aa		11.61	□□□□□ -0.55
NLRC5-223	ENST00000543103	BATF	Q16520	125 aa		11.61	□□□□□ -0.55
NLRC5-223	ENST00000543103	SPANXA1	Q9NS26	97 aa		11.61	□□□□□ -0.55
NLRC5-223	ENST00000543103	DLEU1	O43261	78 aa		11.6	□□□□□ -0.55
NLRC5-223	ENST00000543103	C2orf88	Q9BSF0	95 aa		11.6	□□□□□ -0.55
NLRC5-223	ENST00000543103	HINT1	P49773	126 aa	Predicted RBP	11.59	□□□□□ -0.55
NLRC5-223	ENST00000543103	CRYBA4	P53673	196 aa		11.59	□□□□□ -0.55
NLRC5-223	ENST00000543103	SAMD5	Q5TGI4	173 aa		11.59	□□□□□ -0.55
NLRC5-223	ENST00000543103		Q6ZUT4	128 aa		11.59	□□□□□ -0.55
NLRC5-223	ENST00000543103	SBSPON	Q8IVN8	264 aa		11.59	□□□□□ -0.55
NLRC5-223	ENST00000543103	GTSF1L	Q9H1H1	148 aa		11.59	□□□□□ -0.55
NLRC5-223	ENST00000543103	NPS	P0C0P6	89 aa		11.59	□□□□□ -0.55
NLRC5-223	ENST00000543103	LBH	Q53QV2	105 aa	Predicted RBP	11.59	□□□□□ -0.55
NLRC5-223	ENST00000543103	PAPPA-AS1	Q5QFB9	102 aa		11.59	□□□□□ -0.55
NLRC5-223	ENST00000543103	NFE4	Q86UQ8	179 aa		11.59	□□□□□ -0.55
NLRC5-223	ENST00000543103	MAPKAPK5-AS1	Q8N8E1	139 aa		11.59	□□□□□ -0.55
NLRC5-223	ENST00000543103	RETN	Q9HD89	108 aa		11.59	□□□□□ -0.55
NLRC5-223	ENST00000543103	NOTCH1	P46531	2555 aa		11.59	□□□□□ -0.55
NLRC5-223	ENST00000543103		A0A0J9YXV3	536 aa		11.58	□□□□□ -0.56
NLRC5-223	ENST00000543103	MPV17L2	Q567V2	206 aa		11.58	□□□□□ -0.56
NLRC5-223	ENST00000543103	TRAV8-6	A0A0B4J262	113 aa		11.57	□□□□□ -0.56
NLRC5-223	ENST00000543103	DAD1	P61803	113 aa		11.57	□□□□□ -0.56
NLRC5-223	ENST00000543103	CHAC1	Q9BUX1	264 aa		11.57	□□□□□ -0.56
NLRC5-223	ENST00000543103	TIMM21	Q9BVV7	248 aa		11.57	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms