RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 NIT2Q9NQR4 276 aa10.13□□□□□ -0.79
CSF1R-209ENST00000543093 KRTAP10-4P60372 401 aaPredicted RBP10.12□□□□□ -0.79
CSF1R-209ENST00000543093 GAGE6Q13070 117 aa10.12□□□□□ -0.79
CSF1R-209ENST00000543093 CIRBP-AS1Q8TBR5 109 aa10.12□□□□□ -0.79
CSF1R-209ENST00000543093 PGLYRP4Q96LB8 373 aa10.12□□□□□ -0.79
CSF1R-209ENST00000543093 ENHOQ6UWT2 76 aa10.11□□□□□ -0.79
CSF1R-209ENST00000543093 TRAV26-2A0A0B4J265 109 aa10.1□□□□□ -0.79
CSF1R-209ENST00000543093 RBX1P62877 108 aa10.1□□□□□ -0.79
CSF1R-209ENST00000543093 MIAQ16674 131 aa10.1□□□□□ -0.79
CSF1R-209ENST00000543093 SERTAD4-AS1Q5TG53 156 aa10.1□□□□□ -0.79
CSF1R-209ENST00000543093 TEX261Q6UWH6 196 aa10.1□□□□□ -0.79
CSF1R-209ENST00000543093 TMEM243Q9BU79 118 aa10.1□□□□□ -0.79
CSF1R-209ENST00000543093 COTL1Q14019 142 aa10.09□□□□□ -0.79
CSF1R-209ENST00000543093 FAM74A3Q4VXF1 159 aa10.09□□□□□ -0.79
CSF1R-209ENST00000543093 CLPSL2Q6UWE3 100 aa10.09□□□□□ -0.79
CSF1R-209ENST00000543093 GATD1Q8NB37 220 aa10.09□□□□□ -0.79
CSF1R-209ENST00000543093 TSKUQ8WUA8 353 aa10.09□□□□□ -0.79
CSF1R-209ENST00000543093 GFRA4Q9GZZ7 299 aa10.09□□□□□ -0.79
CSF1R-209ENST00000543093 OSTCQ9NRP0 149 aa10.09□□□□□ -0.79
CSF1R-209ENST00000543093 HIGD1CA8MV81 97 aa10.08□□□□□ -0.8
CSF1R-209ENST00000543093 UBE2L6O14933 153 aa10.08□□□□□ -0.8
CSF1R-209ENST00000543093 HLA-DQA1P01909 254 aa10.08□□□□□ -0.8
CSF1R-209ENST00000543093 AMTP48728 403 aa10.08□□□□□ -0.8
CSF1R-209ENST00000543093 FOXA3P55318 350 aaPredicted RBP10.08□□□□□ -0.8
CSF1R-209ENST00000543093 PRR34Q9NV39 138 aa10.08□□□□□ -0.8
CSF1R-209ENST00000543093 FAM231BA6NCW3 169 aa10.07□□□□□ -0.8
CSF1R-209ENST00000543093 OXTP01178 125 aa10.07□□□□□ -0.8
CSF1R-209ENST00000543093 C14orf177Q52M58 125 aa10.07□□□□□ -0.8
CSF1R-209ENST00000543093 LINC00269Q8N2A0 174 aa10.07□□□□□ -0.8
CSF1R-209ENST00000543093 RPL39LQ96EH5 51 aaKnown RBP10.07□□□□□ -0.8
CSF1R-209ENST00000543093 A0A1B0GUT8 65 aa10.06□□□□□ -0.8
CSF1R-209ENST00000543093 PEA15Q15121 130 aa10.06□□□□□ -0.8
CSF1R-209ENST00000543093 TMEM241Q24JQ0 296 aa10.06□□□□□ -0.8
CSF1R-209ENST00000543093 ISOC2Q96AB3 205 aa10.06□□□□□ -0.8
CSF1R-209ENST00000543093 LRP1Q07954 4544 aaKnown RBP10.06□□□□□ -0.8
CSF1R-209ENST00000543093 RPL23P62829 140 aaKnown RBP10.05□□□□□ -0.8
CSF1R-209ENST00000543093 REG3AQ06141 175 aa10.05□□□□□ -0.8
CSF1R-209ENST00000543093 ADIRFQ15847 76 aa10.05□□□□□ -0.8
CSF1R-209ENST00000543093 NAT8Q9UHE5 227 aa10.05□□□□□ -0.8
CSF1R-209ENST00000543093 V9GYV3 84 aa10.05□□□□□ -0.8
CSF1R-209ENST00000543093 A0A1B0GUV1 79 aa10.04□□□□□ -0.8
CSF1R-209ENST00000543093 C20orf203Q8NBC4 194 aa10.04□□□□□ -0.8
CSF1R-209ENST00000543093 TMEM191AQ9H0A3 160 aa10.04□□□□□ -0.8
CSF1R-209ENST00000543093 SMDT1Q9H4I9 107 aa10.04□□□□□ -0.8
CSF1R-209ENST00000543093 SDHAF1A6NFY7 115 aa10.03□□□□□ -0.8
CSF1R-209ENST00000543093 C9JQL5 133 aa10.03□□□□□ -0.8
CSF1R-209ENST00000543093 USP17L23D6RBM5 183 aa10.03□□□□□ -0.8
CSF1R-209ENST00000543093 NCR2O95944 276 aa10.03□□□□□ -0.8
CSF1R-209ENST00000543093 APCSP02743 223 aa10.03□□□□□ -0.8
CSF1R-209ENST00000543093 SRSF3P84103 164 aaKnown RBP10.03□□□□□ -0.8
CSF1R-209ENST00000543093 IGLV4-60A0A075B6I1 120 aa10.02□□□□□ -0.81
CSF1R-209ENST00000543093 RPL37AP61513 92 aaKnown RBP10.02□□□□□ -0.81
CSF1R-209ENST00000543093 RIGQ13278 110 aa10.02□□□□□ -0.81
CSF1R-209ENST00000543093 NAT8BQ9UHF3 227 aa10.02□□□□□ -0.81
CSF1R-209ENST00000543093 PLA2G2DQ9UNK4 145 aa10.02□□□□□ -0.81
CSF1R-209ENST00000543093 IGLV10-54A0A075B6I4 117 aa10.01□□□□□ -0.81
CSF1R-209ENST00000543093 TRAV8-4A0A0B4J246 113 aa10.01□□□□□ -0.81
CSF1R-209ENST00000543093 TRBV6-5A0A0K0K1A5 114 aa10.01□□□□□ -0.81
CSF1R-209ENST00000543093 NUP35Q8NFH5 326 aa10.01□□□□□ -0.81
CSF1R-209ENST00000543093 MRAP2Q96G30 205 aa10.01□□□□□ -0.81
CSF1R-209ENST00000543093 I3L3M4 83 aa10□□□□□ -0.81
CSF1R-209ENST00000543093 AMMECR1LQ6DCA0 310 aa10□□□□□ -0.81
CSF1R-209ENST00000543093 AMN1Q8IY45 258 aa10□□□□□ -0.81
CSF1R-209ENST00000543093 RNF185Q96GF1 192 aa10□□□□□ -0.81
CSF1R-209ENST00000543093 ST20Q9HBF5 79 aa10□□□□□ -0.81
CSF1R-209ENST00000543093 FAT3Q8TDW7 4589 aa10□□□□□ -0.81
CSF1R-209ENST00000543093 HMCN2Q8NDA2 5059 aa10□□□□□ -0.81
CSF1R-209ENST00000543093 H7C423 109 aa9.99□□□□□ -0.81
CSF1R-209ENST00000543093 PRSS1P07477 247 aa9.99□□□□□ -0.81
CSF1R-209ENST00000543093 RAB4AP20338 218 aa9.99□□□□□ -0.81
CSF1R-209ENST00000543093 PMCHP20382 165 aa9.99□□□□□ -0.81
CSF1R-209ENST00000543093 HNRNPA3P51991 378 aaKnown RBP9.99□□□□□ -0.81
CSF1R-209ENST00000543093 KRTAP26-1Q6PEX3 210 aa9.99□□□□□ -0.81
CSF1R-209ENST00000543093 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.98□□□□□ -0.81
CSF1R-209ENST00000543093 IGKV2-29A2NJV5 120 aaPredicted RBP9.98□□□□□ -0.81
CSF1R-209ENST00000543093 GAS8-AS1O95177 125 aa9.98□□□□□ -0.81
CSF1R-209ENST00000543093 RNASEKQ6P5S7 137 aaKnown RBP9.98□□□□□ -0.81
CSF1R-209ENST00000543093 SMIM27A0A1W2PRY6 76 aa9.97□□□□□ -0.81
CSF1R-209ENST00000543093 RPS10P46783 165 aaKnown RBP9.97□□□□□ -0.81
CSF1R-209ENST00000543093 DGAT2L7PQ6IED9 249 aa9.97□□□□□ -0.81
CSF1R-209ENST00000543093 TMEM242Q9NWH2 141 aa9.97□□□□□ -0.81
CSF1R-209ENST00000543093 IGKV3OR2-268A0A0C4DH90 116 aa9.96□□□□□ -0.82
CSF1R-209ENST00000543093 PPP1R17O96001 155 aa9.96□□□□□ -0.82
CSF1R-209ENST00000543093 TSHBP01222 138 aa9.96□□□□□ -0.82
CSF1R-209ENST00000543093 FGF6P10767 208 aa9.96□□□□□ -0.82
CSF1R-209ENST00000543093 ZNF25P17030 456 aaPredicted RBP9.96□□□□□ -0.82
CSF1R-209ENST00000543093 C9orf163Q8N9P6 203 aa9.96□□□□□ -0.82
CSF1R-209ENST00000543093 CLRN3Q8NCR9 226 aa9.96□□□□□ -0.82
CSF1R-209ENST00000543093 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.96□□□□□ -0.82
CSF1R-209ENST00000543093 PKHD1L1Q86WI1 4243 aa9.95□□□□□ -0.82
CSF1R-209ENST00000543093 A0A1B0GW15 77 aa9.95□□□□□ -0.82
CSF1R-209ENST00000543093 SMKR1H3BMG3 65 aa9.95□□□□□ -0.82
CSF1R-209ENST00000543093 RAB14P61106 215 aa9.95□□□□□ -0.82
CSF1R-209ENST00000543093 TMEM101Q96IK0 257 aa9.95□□□□□ -0.82
CSF1R-209ENST00000543093 BTF3L4Q96K17 158 aa9.95□□□□□ -0.82
CSF1R-209ENST00000543093 TRBV27A0A0K0K1C4 114 aa9.94□□□□□ -0.82
CSF1R-209ENST00000543093 PANO1I0J062 215 aa9.94□□□□□ -0.82
CSF1R-209ENST00000543093 CAMPP49913 170 aa9.94□□□□□ -0.82
CSF1R-209ENST00000543093 POLR2KP53803 58 aaKnown RBP9.94□□□□□ -0.82
CSF1R-209ENST00000543093 hDV102S1A0JD36 115 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms