RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 GAS8-AS1O95177 125 aa8.33□□□□□ -1.08
DDX55-210ENST00000543016 LINC01556Q5JQF7 62 aa8.33□□□□□ -1.08
DDX55-210ENST00000543016 C10orf126Q8N4M7 172 aa8.33□□□□□ -1.08
DDX55-210ENST00000543016 KIR2DL4Q99706 377 aa8.33□□□□□ -1.08
DDX55-210ENST00000543016 H7C423 109 aa8.32□□□□□ -1.08
DDX55-210ENST00000543016 CBLN2Q8IUK8 224 aa8.32□□□□□ -1.08
DDX55-210ENST00000543016 TMEM243Q9BU79 118 aa8.32□□□□□ -1.08
DDX55-210ENST00000543016 MRPL18Q9H0U6 180 aaKnown RBP8.32□□□□□ -1.08
DDX55-210ENST00000543016 TRAPPC1Q9Y5R8 145 aa8.32□□□□□ -1.08
DDX55-210ENST00000543016 NBDYA0A0U1RRE5 68 aa8.31□□□□□ -1.08
DDX55-210ENST00000543016 K7EMI3 77 aa8.31□□□□□ -1.08
DDX55-210ENST00000543016 NPYP01303 97 aa8.31□□□□□ -1.08
DDX55-210ENST00000543016 AMTP48728 403 aa8.31□□□□□ -1.08
DDX55-210ENST00000543016 FABP9Q0Z7S8 132 aa8.31□□□□□ -1.08
DDX55-210ENST00000543016 NTM-AS1Q6ZSK4 140 aa8.31□□□□□ -1.08
DDX55-210ENST00000543016 NIT1Q86X76 327 aa8.31□□□□□ -1.08
DDX55-210ENST00000543016 WFDC10BQ8IUB3 73 aa8.31□□□□□ -1.08
DDX55-210ENST00000543016 CHCHD5Q9BSY4 110 aa8.31□□□□□ -1.08
DDX55-210ENST00000543016 SMIM2Q9BVW6 85 aa8.31□□□□□ -1.08
DDX55-210ENST00000543016 MAP1LC3AQ9H492 121 aa8.31□□□□□ -1.08
DDX55-210ENST00000543016 A0A087WX48 190 aa8.3□□□□□ -1.08
DDX55-210ENST00000543016 FCER1GP30273 86 aa8.3□□□□□ -1.08
DDX55-210ENST00000543016 SMAGPQ0VAQ4 97 aa8.3□□□□□ -1.08
DDX55-210ENST00000543016 Q6ZR54 194 aa8.3□□□□□ -1.08
DDX55-210ENST00000543016 ALMS1Q8TCU4 4167 aa8.3□□□□□ -1.08
DDX55-210ENST00000543016 UBE2L6O14933 153 aa8.29□□□□□ -1.08
DDX55-210ENST00000543016 ATP6V1G1O75348 118 aa8.29□□□□□ -1.08
DDX55-210ENST00000543016 TSHBP01222 138 aa8.29□□□□□ -1.08
DDX55-210ENST00000543016 NXT2Q9NPJ8 142 aaKnown RBP8.29□□□□□ -1.08
DDX55-210ENST00000543016 IGLV2-18A0A075B6J9 118 aa8.28□□□□□ -1.08
DDX55-210ENST00000543016 A0A1B0GUV1 79 aa8.28□□□□□ -1.08
DDX55-210ENST00000543016 TMEM262E9PQX1 116 aa8.28□□□□□ -1.08
DDX55-210ENST00000543016 ESDP10768 282 aa8.28□□□□□ -1.08
DDX55-210ENST00000543016 RAB5AP20339 215 aa8.28□□□□□ -1.08
DDX55-210ENST00000543016 G0S2P27469 103 aa8.28□□□□□ -1.08
DDX55-210ENST00000543016 LAGE3Q14657 143 aa8.28□□□□□ -1.08
DDX55-210ENST00000543016 KIAA1644Q3SXP7 199 aa8.28□□□□□ -1.08
DDX55-210ENST00000543016 Q8N8P6 123 aa8.28□□□□□ -1.08
DDX55-210ENST00000543016 TMEM18Q96B42 140 aa8.28□□□□□ -1.08
DDX55-210ENST00000543016 ALKBH7Q9BT30 221 aaPredicted RBP8.28□□□□□ -1.08
DDX55-210ENST00000543016 COLCA2A8K830 154 aa8.27□□□□□ -1.09
DDX55-210ENST00000543016 ZNF25P17030 456 aaPredicted RBP8.27□□□□□ -1.09
DDX55-210ENST00000543016 IBA57-AS1B1ANH7 110 aa8.26□□□□□ -1.09
DDX55-210ENST00000543016 NFE4Q86UQ8 179 aa8.26□□□□□ -1.09
DDX55-210ENST00000543016 LYSTQ99698 3801 aa8.25□□□□□ -1.09
DDX55-210ENST00000543016 TRAV8-3A0A0A6YYJ7 113 aa8.25□□□□□ -1.09
DDX55-210ENST00000543016 LOC389332A0A1B0GUA5 103 aa8.25□□□□□ -1.09
DDX55-210ENST00000543016 GAGE6Q13070 117 aa8.25□□□□□ -1.09
DDX55-210ENST00000543016 ORMDL2Q53FV1 153 aa8.25□□□□□ -1.09
DDX55-210ENST00000543016 AMMECR1LQ6DCA0 310 aa8.25□□□□□ -1.09
DDX55-210ENST00000543016 PRSS3P2Q8NHM4 247 aa8.25□□□□□ -1.09
DDX55-210ENST00000543016 LINC01549A6NIU2 74 aa8.24□□□□□ -1.09
DDX55-210ENST00000543016 M0R2N4 97 aa8.24□□□□□ -1.09
DDX55-210ENST00000543016 IGHV3-30P01768 117 aa8.24□□□□□ -1.09
DDX55-210ENST00000543016 IGHV3-33P01772 117 aa8.24□□□□□ -1.09
DDX55-210ENST00000543016 IGHV3-30-3P0DP02 117 aa8.24□□□□□ -1.09
DDX55-210ENST00000543016 IGHV3-30-5P0DP03 117 aa8.24□□□□□ -1.09
DDX55-210ENST00000543016 RBX1P62877 108 aa8.24□□□□□ -1.09
DDX55-210ENST00000543016 Q0VG73 95 aa8.24□□□□□ -1.09
DDX55-210ENST00000543016 MPV17L2Q567V2 206 aa8.24□□□□□ -1.09
DDX55-210ENST00000543016 C1orf134Q5TEV5 83 aa8.24□□□□□ -1.09
DDX55-210ENST00000543016 MRPL52Q86TS9 123 aaKnown RBP8.24□□□□□ -1.09
DDX55-210ENST00000543016 C6orf223Q8N319 242 aa8.24□□□□□ -1.09
DDX55-210ENST00000543016 C20orf203Q8NBC4 194 aa8.24□□□□□ -1.09
DDX55-210ENST00000543016 TMEM101Q96IK0 257 aa8.24□□□□□ -1.09
DDX55-210ENST00000543016 TIMM21Q9BVV7 248 aa8.24□□□□□ -1.09
DDX55-210ENST00000543016 CSDC2Q9Y534 153 aaKnown RBP8.24□□□□□ -1.09
DDX55-210ENST00000543016 VPS13DQ5THJ4 4388 aa8.24□□□□□ -1.09
DDX55-210ENST00000543016 DNAH1Q9P2D7 4330 aa8.23□□□□□ -1.09
DDX55-210ENST00000543016 LINC01546A6NGU7 62 aa8.23□□□□□ -1.09
DDX55-210ENST00000543016 FGF6P10767 208 aa8.23□□□□□ -1.09
DDX55-210ENST00000543016 RAB5BP61020 215 aa8.23□□□□□ -1.09
DDX55-210ENST00000543016 RMI2Q96E14 147 aa8.23□□□□□ -1.09
DDX55-210ENST00000543016 COX11Q9Y6N1 276 aa8.23□□□□□ -1.09
DDX55-210ENST00000543016 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.22□□□□□ -1.09
DDX55-210ENST00000543016 IGKV2-29A2NJV5 120 aaPredicted RBP8.22□□□□□ -1.09
DDX55-210ENST00000543016 SCO1O75880 301 aa8.22□□□□□ -1.09
DDX55-210ENST00000543016 ANGP03950 147 aaKnown RBP8.22□□□□□ -1.09
DDX55-210ENST00000543016 IFI27P40305 119 aaPredicted RBP8.22□□□□□ -1.09
DDX55-210ENST00000543016 DGAT2L7PQ6IED9 249 aa8.22□□□□□ -1.09
DDX55-210ENST00000543016 FA2HQ7L5A8 372 aa8.22□□□□□ -1.09
DDX55-210ENST00000543016 OR5A1Q8NGJ0 315 aa8.22□□□□□ -1.09
DDX55-210ENST00000543016 TM2D2Q9BX73 214 aa8.22□□□□□ -1.09
DDX55-210ENST00000543016 KRTAP1-5Q9BYS1 174 aa8.22□□□□□ -1.09
DDX55-210ENST00000543016 SPANXA1Q9NS26 97 aa8.22□□□□□ -1.09
DDX55-210ENST00000543016 KLK12Q9UKR0 248 aa8.22□□□□□ -1.09
DDX55-210ENST00000543016 KMT2CQ8NEZ4 4911 aaKnown RBP8.22□□□□□ -1.09
DDX55-210ENST00000543016 CRPP02741 224 aa8.21□□□□□ -1.1
DDX55-210ENST00000543016 TRGC2P03986 189 aa8.21□□□□□ -1.1
DDX55-210ENST00000543016 MIAQ16674 131 aa8.21□□□□□ -1.1
DDX55-210ENST00000543016 RNASEKQ6P5S7 137 aaKnown RBP8.21□□□□□ -1.1
DDX55-210ENST00000543016 Q8N976 141 aa8.21□□□□□ -1.1
DDX55-210ENST00000543016 C18orf32Q8TCD1 76 aa8.21□□□□□ -1.1
DDX55-210ENST00000543016 DEFB104AQ8WTQ1 72 aa8.21□□□□□ -1.1
DDX55-210ENST00000543016 PRR34Q9NV39 138 aa8.21□□□□□ -1.1
DDX55-210ENST00000543016 NPSP0C0P6 89 aa8.2□□□□□ -1.1
DDX55-210ENST00000543016 LINC00336Q6ZUF6 198 aa8.2□□□□□ -1.1
DDX55-210ENST00000543016 AP5S1Q9NUS5 200 aa8.2□□□□□ -1.1
DDX55-210ENST00000543016 CYSLTR1Q9Y271 337 aa8.2□□□□□ -1.1
DDX55-210ENST00000543016 UBE2D4Q9Y2X8 147 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms