RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 FXYD2P54710 66 aa7.82□□□□□ -1.16
NECAP1-206ENST00000542095 TMEM170BQ5T4T1 132 aa7.82□□□□□ -1.16
NECAP1-206ENST00000542095 NFE4Q86UQ8 179 aa7.82□□□□□ -1.16
NECAP1-206ENST00000542095 OPRPNQ99935 248 aaPredicted RBP7.82□□□□□ -1.16
NECAP1-206ENST00000542095 C1QTNF4Q9BXJ3 329 aa7.82□□□□□ -1.16
NECAP1-206ENST00000542095 VCX2Q9H322 139 aa7.82□□□□□ -1.16
NECAP1-206ENST00000542095 ZNF815PA8K554 130 aa7.81□□□□□ -1.16
NECAP1-206ENST00000542095 SMIM13P0DJ93 91 aa7.81□□□□□ -1.16
NECAP1-206ENST00000542095 KRTAP10-3P60369 221 aa7.81□□□□□ -1.16
NECAP1-206ENST00000542095 AMMECR1LQ6DCA0 310 aa7.81□□□□□ -1.16
NECAP1-206ENST00000542095 ZNRF2Q8NHG8 242 aa7.81□□□□□ -1.16
NECAP1-206ENST00000542095 HIST1H4GQ99525 98 aa7.81□□□□□ -1.16
NECAP1-206ENST00000542095 WFDC10AQ9H1F0 79 aa7.81□□□□□ -1.16
NECAP1-206ENST00000542095 GIG44P09565 113 aaPredicted RBP7.81□□□□□ -1.16
NECAP1-206ENST00000542095 RPL35AP18077 110 aaKnown RBP7.81□□□□□ -1.16
NECAP1-206ENST00000542095 CRYBA4P53673 196 aa7.81□□□□□ -1.16
NECAP1-206ENST00000542095 Q9UF83 564 aa7.81□□□□□ -1.16
NECAP1-206ENST00000542095 C16orf74Q96GX8 76 aa7.8□□□□□ -1.16
NECAP1-206ENST00000542095 MTORP42345 2549 aa7.8□□□□□ -1.16
NECAP1-206ENST00000542095 INAFM1C9JVW0 142 aa7.79□□□□□ -1.16
NECAP1-206ENST00000542095 COTL1Q14019 142 aa7.79□□□□□ -1.16
NECAP1-206ENST00000542095 RAB37Q96AX2 223 aa7.79□□□□□ -1.16
NECAP1-206ENST00000542095 CHCHD7Q9BUK0 85 aa7.79□□□□□ -1.16
NECAP1-206ENST00000542095 TRBV7-3A0A075B6L6 115 aa7.79□□□□□ -1.16
NECAP1-206ENST00000542095 TRAV4A0A0B4J268 109 aa7.79□□□□□ -1.16
NECAP1-206ENST00000542095 H3BUT2 72 aa7.79□□□□□ -1.16
NECAP1-206ENST00000542095 K7EP13 123 aa7.79□□□□□ -1.16
NECAP1-206ENST00000542095 DAZ2Q13117 558 aaKnown RBP7.79□□□□□ -1.16
NECAP1-206ENST00000542095 SCGB1D4Q6XE38 83 aa7.79□□□□□ -1.16
NECAP1-206ENST00000542095 LINC00482Q8N8I6 264 aa7.79□□□□□ -1.16
NECAP1-206ENST00000542095 SPANXA1Q9NS26 97 aa7.79□□□□□ -1.16
NECAP1-206ENST00000542095 Q6ZTI0 123 aa7.78□□□□□ -1.16
NECAP1-206ENST00000542095 PHLDA1Q8WV24 401 aaPredicted RBP7.78□□□□□ -1.16
NECAP1-206ENST00000542095 AMELXQ99217 191 aa7.78□□□□□ -1.16
NECAP1-206ENST00000542095 IGHV3-38A0A0C4DH36 116 aa7.78□□□□□ -1.16
NECAP1-206ENST00000542095 ZNF479Q96JC4 524 aa7.78□□□□□ -1.16
NECAP1-206ENST00000542095 NOP10Q9NPE3 64 aaKnown RBP7.78□□□□□ -1.16
NECAP1-206ENST00000542095 NHP2Q9NX24 153 aaKnown RBP7.78□□□□□ -1.16
NECAP1-206ENST00000542095 SETXQ7Z333 2677 aaKnown RBP7.78□□□□□ -1.16
NECAP1-206ENST00000542095 BAHCC1Q9P281 2608 aa7.78□□□□□ -1.16
NECAP1-206ENST00000542095 TRBV10-1A0A0K0K1A3 114 aa7.77□□□□□ -1.17
NECAP1-206ENST00000542095 TMEM223A0PJW6 202 aa7.77□□□□□ -1.17
NECAP1-206ENST00000542095 K7EQD1 137 aa7.77□□□□□ -1.17
NECAP1-206ENST00000542095 CSNK1G2-AS1Q8NCQ2 148 aa7.77□□□□□ -1.17
NECAP1-206ENST00000542095 UBE2D4Q9Y2X8 147 aa7.77□□□□□ -1.17
NECAP1-206ENST00000542095 A0A0J9YXV3 536 aa7.77□□□□□ -1.17
NECAP1-206ENST00000542095 ZNF22P17026 224 aaPredicted RBP7.77□□□□□ -1.17
NECAP1-206ENST00000542095 LGALS3P17931 250 aaKnown RBP7.77□□□□□ -1.17
NECAP1-206ENST00000542095 RPL36AP83881 106 aaKnown RBP7.77□□□□□ -1.17
NECAP1-206ENST00000542095 RRN3P1Q2M238 152 aa7.77□□□□□ -1.17
NECAP1-206ENST00000542095 GTF2H5Q6ZYL4 71 aa7.77□□□□□ -1.17
NECAP1-206ENST00000542095 RPL36ALQ969Q0 106 aaKnown RBP7.77□□□□□ -1.17
NECAP1-206ENST00000542095 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.76□□□□□ -1.17
NECAP1-206ENST00000542095 IGKV2-29A2NJV5 120 aaPredicted RBP7.76□□□□□ -1.17
NECAP1-206ENST00000542095 GAGE10A6NGK3 116 aa7.76□□□□□ -1.17
NECAP1-206ENST00000542095 J3QQQ9 107 aa7.76□□□□□ -1.17
NECAP1-206ENST00000542095 LEPROTO15243 131 aa7.76□□□□□ -1.17
NECAP1-206ENST00000542095 CEMP1Q6PRD7 247 aaPredicted RBP7.76□□□□□ -1.17
NECAP1-206ENST00000542095 FAM104AQ969W3 186 aa7.76□□□□□ -1.17
NECAP1-206ENST00000542095 PLEKHB2Q96CS7 222 aa7.76□□□□□ -1.17
NECAP1-206ENST00000542095 PLAC8L1A1L4L8 177 aa7.76□□□□□ -1.17
NECAP1-206ENST00000542095 K7ERJ3 54 aa7.76□□□□□ -1.17
NECAP1-206ENST00000542095 FLNBO75369 2602 aaKnown RBP7.76□□□□□ -1.17
NECAP1-206ENST00000542095 TSPEAR-AS2P59090 65 aa7.76□□□□□ -1.17
NECAP1-206ENST00000542095 MRPS36P82909 103 aaKnown RBP7.76□□□□□ -1.17
NECAP1-206ENST00000542095 NAA38Q9BRA0 125 aaKnown RBP7.76□□□□□ -1.17
NECAP1-206ENST00000542095 A0A1W2PPM0 123 aa7.75□□□□□ -1.17
NECAP1-206ENST00000542095 CIDEAO60543 219 aa7.75□□□□□ -1.17
NECAP1-206ENST00000542095 SAMD5Q5TGI4 173 aa7.75□□□□□ -1.17
NECAP1-206ENST00000542095 OVOL2Q9BRP0 275 aa7.75□□□□□ -1.17
NECAP1-206ENST00000542095 A0A0J9YY99 117 aa7.75□□□□□ -1.17
NECAP1-206ENST00000542095 INSL3P51460 131 aa7.75□□□□□ -1.17
NECAP1-206ENST00000542095 SRSF9Q13242 221 aaKnown RBP eCLIP7.75□□□□□ -1.17
NECAP1-206ENST00000542095 C12orf74Q32Q52 190 aa7.75□□□□□ -1.17
NECAP1-206ENST00000542095 DAZ4Q86SG3 579 aaKnown RBP7.75□□□□□ -1.17
NECAP1-206ENST00000542095 DAZ3Q9NR90 486 aaKnown RBP7.75□□□□□ -1.17
NECAP1-206ENST00000542095 TRGV2A0A075B6R0 118 aa7.74□□□□□ -1.17
NECAP1-206ENST00000542095 FABP2P12104 132 aa7.74□□□□□ -1.17
NECAP1-206ENST00000542095 SLC25A29Q8N8R3 303 aa7.74□□□□□ -1.17
NECAP1-206ENST00000542095 TIMM21Q9BVV7 248 aa7.74□□□□□ -1.17
NECAP1-206ENST00000542095 SETD2Q9BYW2 2564 aaPredicted RBP7.74□□□□□ -1.17
NECAP1-206ENST00000542095 GAGE12BA1L429 117 aa7.74□□□□□ -1.17
NECAP1-206ENST00000542095 K7EP34 96 aa7.74□□□□□ -1.17
NECAP1-206ENST00000542095 GAGE7O76087 117 aa7.74□□□□□ -1.17
NECAP1-206ENST00000542095 GAGE12FP0CL80 117 aa7.74□□□□□ -1.17
NECAP1-206ENST00000542095 GAGE12GP0CL81 117 aa7.74□□□□□ -1.17
NECAP1-206ENST00000542095 GAGE12IP0CL82 117 aa7.74□□□□□ -1.17
NECAP1-206ENST00000542095 RNASE13Q5GAN3 156 aaKnown RBP7.74□□□□□ -1.17
NECAP1-206ENST00000542095 C9orf66Q5T8R8 295 aa7.74□□□□□ -1.17
NECAP1-206ENST00000542095 Q6ZUT4 128 aa7.74□□□□□ -1.17
NECAP1-206ENST00000542095 SPANXB1Q9NS25 103 aaPredicted RBP7.74□□□□□ -1.17
NECAP1-206ENST00000542095 TINCRA0A1B0GVN0 87 aa7.73□□□□□ -1.17
NECAP1-206ENST00000542095 A0A1B0GWB2 263 aa7.73□□□□□ -1.17
NECAP1-206ENST00000542095 OR5A1Q8NGJ0 315 aa7.73□□□□□ -1.17
NECAP1-206ENST00000542095 UBE2D3P61077 147 aa7.73□□□□□ -1.17
NECAP1-206ENST00000542095 UBE2D2P62837 147 aa7.73□□□□□ -1.17
NECAP1-206ENST00000542095 DGAT2L7PQ6IED9 249 aa7.73□□□□□ -1.17
NECAP1-206ENST00000542095 SPCS1Q9Y6A9 102 aa7.73□□□□□ -1.17
NECAP1-206ENST00000542095 IGHV3-64A0A075B6Q5 118 aa7.72□□□□□ -1.17
NECAP1-206ENST00000542095 GAGE12JA6NER3 117 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms