RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 PGPEP1Q9NXJ5 209 aa6.44□□□□□ -1.38
YBX3-212ENST00000542002 NAT8BQ9UHF3 227 aa6.44□□□□□ -1.38
YBX3-212ENST00000542002 DNAH8Q96JB1 4490 aa6.43□□□□□ -1.38
YBX3-212ENST00000542002 PCLOQ9Y6V0 5065 aa6.43□□□□□ -1.38
YBX3-212ENST00000542002 IGLV4-60A0A075B6I1 120 aa6.43□□□□□ -1.38
YBX3-212ENST00000542002 TRBV25-1A0A075B6N4 114 aa6.43□□□□□ -1.38
YBX3-212ENST00000542002 SMKR1H3BMG3 65 aa6.43□□□□□ -1.38
YBX3-212ENST00000542002 LECT2O14960 151 aa6.43□□□□□ -1.38
YBX3-212ENST00000542002 KRTAP10-1P60331 282 aa6.43□□□□□ -1.38
YBX3-212ENST00000542002 RIGQ13278 110 aa6.43□□□□□ -1.38
YBX3-212ENST00000542002 TMEM97Q5BJF2 176 aa6.43□□□□□ -1.38
YBX3-212ENST00000542002 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.43□□□□□ -1.38
YBX3-212ENST00000542002 BAALCQ8WXS3 180 aa6.43□□□□□ -1.38
YBX3-212ENST00000542002 BORCS7Q96B45 105 aa6.43□□□□□ -1.38
YBX3-212ENST00000542002 IGKV2D-24A0A075B6R9 120 aa6.42□□□□□ -1.38
YBX3-212ENST00000542002 TRBV6-5A0A0K0K1A5 114 aa6.42□□□□□ -1.38
YBX3-212ENST00000542002 SDHAF1A6NFY7 115 aa6.42□□□□□ -1.38
YBX3-212ENST00000542002 ANGP03950 147 aaKnown RBP6.42□□□□□ -1.38
YBX3-212ENST00000542002 KRTAP26-1Q6PEX3 210 aa6.42□□□□□ -1.38
YBX3-212ENST00000542002 LINC00269Q8N2A0 174 aa6.42□□□□□ -1.38
YBX3-212ENST00000542002 Q8N814 137 aa6.42□□□□□ -1.38
YBX3-212ENST00000542002 C20orf203Q8NBC4 194 aa6.42□□□□□ -1.38
YBX3-212ENST00000542002 TM2D2Q9BX73 214 aa6.42□□□□□ -1.38
YBX3-212ENST00000542002 PRR34Q9NV39 138 aa6.42□□□□□ -1.38
YBX3-212ENST00000542002 ABCA13Q86UQ4 5058 aa6.41□□□□□ -1.38
YBX3-212ENST00000542002 A0A1B0GXF2 115 aa6.41□□□□□ -1.38
YBX3-212ENST00000542002 EREGO14944 169 aa6.41□□□□□ -1.38
YBX3-212ENST00000542002 NCR2O95944 276 aa6.41□□□□□ -1.38
YBX3-212ENST00000542002 ADCYAP1P18509 176 aa6.41□□□□□ -1.38
YBX3-212ENST00000542002 CAMPP49913 170 aa6.41□□□□□ -1.38
YBX3-212ENST00000542002 POLR2KP53803 58 aaKnown RBP6.41□□□□□ -1.38
YBX3-212ENST00000542002 COTL1Q14019 142 aa6.41□□□□□ -1.38
YBX3-212ENST00000542002 ELOBQ15370 118 aa6.41□□□□□ -1.38
YBX3-212ENST00000542002 MRPL51Q4U2R6 128 aaKnown RBP6.41□□□□□ -1.38
YBX3-212ENST00000542002 FAM104BQ5XKR9 115 aa6.41□□□□□ -1.38
YBX3-212ENST00000542002 KCNIP4Q6PIL6 250 aa6.41□□□□□ -1.38
YBX3-212ENST00000542002 CLPSL2Q6UWE3 100 aa6.41□□□□□ -1.38
YBX3-212ENST00000542002 NRACQ8N912 160 aa6.41□□□□□ -1.38
YBX3-212ENST00000542002 TMEM243Q9BU79 118 aa6.41□□□□□ -1.38
YBX3-212ENST00000542002 KRTAP4-5Q9BYR2 181 aa6.41□□□□□ -1.38
YBX3-212ENST00000542002 KRTAP9-6A0A140TA67 174 aa6.4□□□□□ -1.38
YBX3-212ENST00000542002 A0A1B0GUV1 79 aa6.4□□□□□ -1.38
YBX3-212ENST00000542002 CDK2AP2O75956 126 aa6.4□□□□□ -1.38
YBX3-212ENST00000542002 TSHBP01222 138 aa6.4□□□□□ -1.38
YBX3-212ENST00000542002 AMTP48728 403 aa6.4□□□□□ -1.38
YBX3-212ENST00000542002 MRPL54Q6P161 138 aaKnown RBP6.4□□□□□ -1.38
YBX3-212ENST00000542002 MRAP2Q96G30 205 aa6.4□□□□□ -1.38
YBX3-212ENST00000542002 TMEM70Q9BUB7 260 aa6.4□□□□□ -1.38
YBX3-212ENST00000542002 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.39□□□□□ -1.39
YBX3-212ENST00000542002 IGKV2-29A2NJV5 120 aaPredicted RBP6.39□□□□□ -1.39
YBX3-212ENST00000542002 TMEM218A2RU14 115 aa6.39□□□□□ -1.39
YBX3-212ENST00000542002 I3L3M4 83 aa6.39□□□□□ -1.39
YBX3-212ENST00000542002 PMCHP20382 165 aa6.39□□□□□ -1.39
YBX3-212ENST00000542002 XGP55808 180 aa6.39□□□□□ -1.39
YBX3-212ENST00000542002 Q0VG73 95 aa6.39□□□□□ -1.39
YBX3-212ENST00000542002 CDPF1Q6NVV7 123 aa6.39□□□□□ -1.39
YBX3-212ENST00000542002 ST20Q9HBF5 79 aa6.39□□□□□ -1.39
YBX3-212ENST00000542002 TRBV27A0A0K0K1C4 114 aa6.38□□□□□ -1.39
YBX3-212ENST00000542002 ESDP10768 282 aa6.38□□□□□ -1.39
YBX3-212ENST00000542002 GCSHP23434 173 aa6.38□□□□□ -1.39
YBX3-212ENST00000542002 PKIAP61925 76 aa6.38□□□□□ -1.39
YBX3-212ENST00000542002 REG3AQ06141 175 aa6.38□□□□□ -1.39
YBX3-212ENST00000542002 PNRC1Q12796 327 aaPredicted RBP6.38□□□□□ -1.39
YBX3-212ENST00000542002 UQCC3Q6UW78 93 aa6.38□□□□□ -1.39
YBX3-212ENST00000542002 NTN5Q8WTR8 489 aaPredicted RBP6.38□□□□□ -1.39
YBX3-212ENST00000542002 RMI2Q96E14 147 aa6.38□□□□□ -1.39
YBX3-212ENST00000542002 TMEM242Q9NWH2 141 aa6.38□□□□□ -1.39
YBX3-212ENST00000542002 COX11Q9Y6N1 276 aa6.38□□□□□ -1.39
YBX3-212ENST00000542002 IGLV10-54A0A075B6I4 117 aa6.37□□□□□ -1.39
YBX3-212ENST00000542002 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.37□□□□□ -1.39
YBX3-212ENST00000542002 IGLV5-52A0A0A0MRZ9 124 aa6.37□□□□□ -1.39
YBX3-212ENST00000542002 A0A1B0GW15 77 aa6.37□□□□□ -1.39
YBX3-212ENST00000542002 PPP1R2P9O14990 202 aa6.37□□□□□ -1.39
YBX3-212ENST00000542002 HBBP68871 147 aa6.37□□□□□ -1.39
YBX3-212ENST00000542002 MIAQ16674 131 aa6.37□□□□□ -1.39
YBX3-212ENST00000542002 LINC01620Q4KN68 170 aa6.37□□□□□ -1.39
YBX3-212ENST00000542002 COMMD7Q86VX2 200 aa6.37□□□□□ -1.39
YBX3-212ENST00000542002 ANAPC16Q96DE5 110 aa6.37□□□□□ -1.39
YBX3-212ENST00000542002 C1orf43Q9BWL3 253 aa6.37□□□□□ -1.39
YBX3-212ENST00000542002 FAM30AQ9NZY2 134 aa6.37□□□□□ -1.39
YBX3-212ENST00000542002 TRBV24-1A0A075B6N3 115 aa6.36□□□□□ -1.39
YBX3-212ENST00000542002 LINC00862A6NCI5 91 aa6.36□□□□□ -1.39
YBX3-212ENST00000542002 F8W036 122 aa6.36□□□□□ -1.39
YBX3-212ENST00000542002 VCYO14598 125 aa6.36□□□□□ -1.39
YBX3-212ENST00000542002 UBE2L6O14933 153 aa6.36□□□□□ -1.39
YBX3-212ENST00000542002 CRPP02741 224 aa6.36□□□□□ -1.39
YBX3-212ENST00000542002 APCSP02743 223 aa6.36□□□□□ -1.39
YBX3-212ENST00000542002 MT-ND4LP03901 98 aa6.36□□□□□ -1.39
YBX3-212ENST00000542002 FGF6P10767 208 aa6.36□□□□□ -1.39
YBX3-212ENST00000542002 CKS2P33552 79 aa6.36□□□□□ -1.39
YBX3-212ENST00000542002 SUMO2P61956 95 aaKnown RBP6.36□□□□□ -1.39
YBX3-212ENST00000542002 HAMPP81172 84 aa6.36□□□□□ -1.39
YBX3-212ENST00000542002 FAT1Q14517 4588 aa6.36□□□□□ -1.39
YBX3-212ENST00000542002 D6R8Y8 96 aa6.35□□□□□ -1.39
YBX3-212ENST00000542002 USP17L23D6RBM5 183 aa6.35□□□□□ -1.39
YBX3-212ENST00000542002 H7C423 109 aa6.35□□□□□ -1.39
YBX3-212ENST00000542002 TNFRSF6BO95407 300 aa6.35□□□□□ -1.39
YBX3-212ENST00000542002 C10orf91Q5T1B1 145 aa6.35□□□□□ -1.39
YBX3-212ENST00000542002 IGKV3OR2-268A0A0C4DH90 116 aa6.34□□□□□ -1.39
YBX3-212ENST00000542002 NPYP01303 97 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms