RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 TLX1NBP0CAT3 122 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 CFC1BP0CG36 223 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 BVES-AS1Q5T3Y7 98 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 TEN1Q86WV5 123 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 PCP2Q8IVA1 136 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 POM121L12Q8N7R1 296 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 DEFB108BQ8NET1 73 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 OR8B3Q8NGG8 313 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 DCANP1Q8TF63 244 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 RBMXL1Q96E39 390 aaKnown RBP3.76□□□□□ -1.81
DDB1-219ENST00000541513 GAFA1Q96PS6 74 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 OR8B2Q96RD0 313 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 JMJD1CQ15652 2540 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 NF1P21359 2839 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 IGHV3-21A0A0B4J1V1 117 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 TMEM14DPA8MWL7 114 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 B4DSR2 109 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 H3BT86 120 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 H7C423 109 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 M0R378 163 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 SLC25A4P12235 298 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 PTHLHP12272 177 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 HLA-DMBP28068 263 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 CAV3P56539 151 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 MPV17LQ2QL34 196 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 Q6P435 159 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 DPPA3Q6W0C5 159 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 BPIFA4PQ86YQ2 179 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 CD177Q8N6Q3 437 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 Q8N976 141 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 MAPK1IP1LQ8NDC0 245 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 OR5C1Q8NGR4 320 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 OR10AG1Q8NH19 301 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 CST11Q9H112 138 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 SLC39A9Q9NUM3 307 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 SPCS1Q9Y6A9 102 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 C2CD3Q4AC94 2353 aa3.75□□□□□ -1.81
DDB1-219ENST00000541513 TRBV27A0A0K0K1C4 114 aa3.74□□□□□ -1.81
DDB1-219ENST00000541513 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
DDB1-219ENST00000541513 FAM24AA6NFZ4 105 aa3.74□□□□□ -1.81
DDB1-219ENST00000541513 ZNF737O75373 536 aa3.74□□□□□ -1.81
DDB1-219ENST00000541513 ZNF324O75467 553 aaPredicted RBP3.74□□□□□ -1.81
DDB1-219ENST00000541513 HLA-DQA1P01909 254 aa3.74□□□□□ -1.81
DDB1-219ENST00000541513 PRM2P04554 102 aa3.74□□□□□ -1.81
DDB1-219ENST00000541513 MSMBP08118 114 aa3.74□□□□□ -1.81
DDB1-219ENST00000541513 SFTA3P0C7M3 94 aa3.74□□□□□ -1.81
DDB1-219ENST00000541513 CFC1P0CG37 223 aa3.74□□□□□ -1.81
DDB1-219ENST00000541513 TPT1P13693 172 aaKnown RBP3.74□□□□□ -1.81
DDB1-219ENST00000541513 GNB2P62879 340 aa3.74□□□□□ -1.81
DDB1-219ENST00000541513 SPATA45Q537H7 98 aa3.74□□□□□ -1.81
DDB1-219ENST00000541513 PHF5AQ7RTV0 110 aaKnown RBP3.74□□□□□ -1.81
DDB1-219ENST00000541513 ZFAND2AQ8N6M9 145 aa3.74□□□□□ -1.81
DDB1-219ENST00000541513 FAM216BQ8N7L0 139 aa3.74□□□□□ -1.81
DDB1-219ENST00000541513 OR2T35Q8NGX2 323 aa3.74□□□□□ -1.81
DDB1-219ENST00000541513 HDHD3Q9BSH5 251 aaPredicted RBP3.74□□□□□ -1.81
DDB1-219ENST00000541513 A0A1W2PPM0 123 aa3.73□□□□□ -1.81
DDB1-219ENST00000541513 SYNGR2O43760 224 aa3.73□□□□□ -1.81
DDB1-219ENST00000541513 SSSCA1O60232 199 aa3.73□□□□□ -1.81
DDB1-219ENST00000541513 TFF1P04155 84 aa3.73□□□□□ -1.81
DDB1-219ENST00000541513 CD3DP04234 171 aa3.73□□□□□ -1.81
DDB1-219ENST00000541513 IGKV2-30P06310 120 aa3.73□□□□□ -1.81
DDB1-219ENST00000541513 CGB3P0DN86 165 aa3.73□□□□□ -1.81
DDB1-219ENST00000541513 CGB7P0DN87 165 aa3.73□□□□□ -1.81
DDB1-219ENST00000541513 IGHV3-30-3P0DP02 117 aa3.73□□□□□ -1.81
DDB1-219ENST00000541513 COX7CP15954 63 aa3.73□□□□□ -1.81
DDB1-219ENST00000541513 ELK1P19419 428 aa3.73□□□□□ -1.81
DDB1-219ENST00000541513 MRPS36P82909 103 aaKnown RBP3.73□□□□□ -1.81
DDB1-219ENST00000541513 PIGYQ3MUY2 71 aa3.73□□□□□ -1.81
DDB1-219ENST00000541513 ZNF329Q86UD4 541 aa3.73□□□□□ -1.81
DDB1-219ENST00000541513 C20orf78Q9BR46 151 aa3.73□□□□□ -1.81
DDB1-219ENST00000541513 ATRQ13535 2644 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 TRBV24-1A0A075B6N3 115 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 IGHV1-3A0A0C4DH29 117 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 GRIFINA4D1Z8 144 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 BUB1B-PAK6H3BSN5 160 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 M0R1W7 72 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 NPPCP23582 126 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 NPC2P61916 151 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 LSM3P62310 102 aaKnown RBP3.72□□□□□ -1.81
DDB1-219ENST00000541513 HBBP68871 147 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 PMCHL1Q16048 86 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 AMN1Q8IY45 258 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 CIRBP-AS1Q8TBR5 109 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 LSM10Q969L4 123 aaKnown RBP3.72□□□□□ -1.81
DDB1-219ENST00000541513 PRELID3AQ96N28 172 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 VGLL1Q99990 258 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 PMCHL2Q9BQD1 86 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 SMDT1Q9H4I9 107 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 XAGE1AQ9HD64 81 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 TMEM242Q9NWH2 141 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 IL36BQ9NZH7 164 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 ABRACLQ9P1F3 81 aa3.72□□□□□ -1.81
DDB1-219ENST00000541513 ZFHX3Q15911 3703 aa3.71□□□□□ -1.81
DDB1-219ENST00000541513 TRBV6-6A0A0A6YYG2 114 aa3.71□□□□□ -1.82
DDB1-219ENST00000541513 TMEM223A0PJW6 202 aa3.71□□□□□ -1.82
DDB1-219ENST00000541513 TMEM30CPA0ZSE6 113 aa3.71□□□□□ -1.82
DDB1-219ENST00000541513 RBAKDNA6NC62 111 aa3.71□□□□□ -1.82
DDB1-219ENST00000541513 TMEM256-PLSCR3K7ERE1 68 aa3.71□□□□□ -1.82
DDB1-219ENST00000541513 K7ERS5 55 aa3.71□□□□□ -1.82
DDB1-219ENST00000541513 CXCL1P09341 107 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms