RNA–Protein interactions for RNA: ENST00000540935.5

DDX11-217, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-217ENST00000540935 TEX261Q6UWH6 196 aa9.63□□□□□ -0.87
DDX11-217ENST00000540935 CLRN3Q8NCR9 226 aa9.63□□□□□ -0.87
DDX11-217ENST00000540935 PRSS1P07477 247 aa9.62□□□□□ -0.87
DDX11-217ENST00000540935 AMTP48728 403 aa9.62□□□□□ -0.87
DDX11-217ENST00000540935 CT83Q5H943 113 aa9.62□□□□□ -0.87
DDX11-217ENST00000540935 KRTAP26-1Q6PEX3 210 aa9.62□□□□□ -0.87
DDX11-217ENST00000540935 C20orf203Q8NBC4 194 aa9.62□□□□□ -0.87
DDX11-217ENST00000540935 GTSF1Q8WW33 167 aa9.62□□□□□ -0.87
DDX11-217ENST00000540935 DNAH8Q96JB1 4490 aa9.61□□□□□ -0.87
DDX11-217ENST00000540935 GATD1Q8NB37 220 aa9.61□□□□□ -0.87
DDX11-217ENST00000540935 CIRBP-AS1Q8TBR5 109 aa9.61□□□□□ -0.87
DDX11-217ENST00000540935 EIF5A2Q9GZV4 153 aaKnown RBP9.61□□□□□ -0.87
DDX11-217ENST00000540935 IGLV4-60A0A075B6I1 120 aa9.6□□□□□ -0.87
DDX11-217ENST00000540935 IGLV10-54A0A075B6I4 117 aa9.6□□□□□ -0.87
DDX11-217ENST00000540935 NCR2O95944 276 aa9.6□□□□□ -0.87
DDX11-217ENST00000540935 CEBPGP53567 150 aa9.6□□□□□ -0.87
DDX11-217ENST00000540935 FOXA3P55318 350 aaPredicted RBP9.6□□□□□ -0.87
DDX11-217ENST00000540935 C9orf163Q8N9P6 203 aa9.6□□□□□ -0.87
DDX11-217ENST00000540935 DEFB104AQ8WTQ1 72 aa9.6□□□□□ -0.87
DDX11-217ENST00000540935 BORCS7Q96B45 105 aa9.6□□□□□ -0.87
DDX11-217ENST00000540935 TRAV26-2A0A0B4J265 109 aa9.59□□□□□ -0.87
DDX11-217ENST00000540935 SMIM7Q9BQ49 75 aa9.59□□□□□ -0.87
DDX11-217ENST00000540935 SRRM2Q9UQ35 2752 aaKnown RBP9.58□□□□□ -0.88
DDX11-217ENST00000540935 FLG2Q5D862 2391 aaPredicted RBP9.58□□□□□ -0.88
DDX11-217ENST00000540935 H7C423 109 aa9.58□□□□□ -0.88
DDX11-217ENST00000540935 FAM210AQ96ND0 272 aa9.58□□□□□ -0.88
DDX11-217ENST00000540935 GFRA4Q9GZZ7 299 aa9.58□□□□□ -0.88
DDX11-217ENST00000540935 DMBT1Q9UGM3 2413 aaPredicted RBP9.58□□□□□ -0.88
DDX11-217ENST00000540935 FAM231BA6NCW3 169 aa9.57□□□□□ -0.88
DDX11-217ENST00000540935 CNBPP62633 177 aaKnown RBP9.57□□□□□ -0.88
DDX11-217ENST00000540935 LINC01551Q86U37 167 aa9.57□□□□□ -0.88
DDX11-217ENST00000540935 RPL39LQ96EH5 51 aaKnown RBP9.57□□□□□ -0.88
DDX11-217ENST00000540935 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.56□□□□□ -0.88
DDX11-217ENST00000540935 SDHAF1A6NFY7 115 aa9.56□□□□□ -0.88
DDX11-217ENST00000540935 ZNF727A8MUV8 499 aa9.56□□□□□ -0.88
DDX11-217ENST00000540935 APCSP02743 223 aa9.56□□□□□ -0.88
DDX11-217ENST00000540935 AMMECR1LQ6DCA0 310 aa9.56□□□□□ -0.88
DDX11-217ENST00000540935 TSKUQ8WUA8 353 aa9.56□□□□□ -0.88
DDX11-217ENST00000540935 OSTCQ9NRP0 149 aa9.56□□□□□ -0.88
DDX11-217ENST00000540935 AP5S1Q9NUS5 200 aa9.56□□□□□ -0.88
DDX11-217ENST00000540935 TRBV6-5A0A0K0K1A5 114 aa9.55□□□□□ -0.88
DDX11-217ENST00000540935 A0A1B0GUT8 65 aa9.55□□□□□ -0.88
DDX11-217ENST00000540935 hDV102S1A0JD36 115 aa9.55□□□□□ -0.88
DDX11-217ENST00000540935 HIGD1CA8MV81 97 aa9.55□□□□□ -0.88
DDX11-217ENST00000540935 I3L3M4 83 aa9.55□□□□□ -0.88
DDX11-217ENST00000540935 J3QL48 77 aa9.55□□□□□ -0.88
DDX11-217ENST00000540935 SRP19P09132 144 aaKnown RBP9.54□□□□□ -0.88
DDX11-217ENST00000540935 ZNF25P17030 456 aaPredicted RBP9.54□□□□□ -0.88
DDX11-217ENST00000540935 CFAP161Q6P656 301 aa9.54□□□□□ -0.88
DDX11-217ENST00000540935 TMEM191AQ9H0A3 160 aa9.54□□□□□ -0.88
DDX11-217ENST00000540935 PMCHP20382 165 aa9.53□□□□□ -0.88
DDX11-217ENST00000540935 FAM74A3Q4VXF1 159 aa9.53□□□□□ -0.88
DDX11-217ENST00000540935 RNASEKQ6P5S7 137 aaKnown RBP9.53□□□□□ -0.88
DDX11-217ENST00000540935 SDIM1Q6ZPB5 146 aa9.53□□□□□ -0.88
DDX11-217ENST00000540935 ST20Q9HBF5 79 aa9.53□□□□□ -0.88
DDX11-217ENST00000540935 KRTAP29-1A8MX34 341 aaPredicted RBP9.52□□□□□ -0.89
DDX11-217ENST00000540935 FGF6P10767 208 aa9.52□□□□□ -0.89
DDX11-217ENST00000540935 KRTAP10-4P60372 401 aaPredicted RBP9.52□□□□□ -0.89
DDX11-217ENST00000540935 MRAP2Q96G30 205 aa9.52□□□□□ -0.89
DDX11-217ENST00000540935 BTF3L4Q96K17 158 aa9.52□□□□□ -0.89
DDX11-217ENST00000540935 MYCBP2O75592 4640 aa9.51□□□□□ -0.89
DDX11-217ENST00000540935 IGHV3-64A0A075B6Q5 118 aa9.51□□□□□ -0.89
DDX11-217ENST00000540935 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.51□□□□□ -0.89
DDX11-217ENST00000540935 IGKV3OR2-268A0A0C4DH90 116 aa9.51□□□□□ -0.89
DDX11-217ENST00000540935 IGKV2-29A2NJV5 120 aaPredicted RBP9.51□□□□□ -0.89
DDX11-217ENST00000540935 GAGE12HA6NDE8 117 aa9.51□□□□□ -0.89
DDX11-217ENST00000540935 TMEM101Q96IK0 257 aa9.51□□□□□ -0.89
DDX11-217ENST00000540935 PPP1R17O96001 155 aa9.5□□□□□ -0.89
DDX11-217ENST00000540935 RAB4AP20338 218 aa9.5□□□□□ -0.89
DDX11-217ENST00000540935 RIGQ13278 110 aa9.5□□□□□ -0.89
DDX11-217ENST00000540935 TMEM241Q24JQ0 296 aa9.5□□□□□ -0.89
DDX11-217ENST00000540935 CHCHD10Q8WYQ3 142 aaPredicted RBP9.5□□□□□ -0.89
DDX11-217ENST00000540935 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.5□□□□□ -0.89
DDX11-217ENST00000540935 V9GYV3 84 aa9.5□□□□□ -0.89
DDX11-217ENST00000540935 TRBV27A0A0K0K1C4 114 aa9.49□□□□□ -0.89
DDX11-217ENST00000540935 ESDP10768 282 aa9.49□□□□□ -0.89
DDX11-217ENST00000540935 RPL37AP61513 92 aaKnown RBP9.49□□□□□ -0.89
DDX11-217ENST00000540935 CIRBPQ14011 172 aaKnown RBP9.49□□□□□ -0.89
DDX11-217ENST00000540935 OR5A1Q8NGJ0 315 aa9.49□□□□□ -0.89
DDX11-217ENST00000540935 ISOC2Q96AB3 205 aa9.49□□□□□ -0.89
DDX11-217ENST00000540935 RNF185Q96GF1 192 aa9.49□□□□□ -0.89
DDX11-217ENST00000540935 HERC1Q15751 4861 aa9.48□□□□□ -0.89
DDX11-217ENST00000540935 A0A1B0GVG6 124 aa9.48□□□□□ -0.89
DDX11-217ENST00000540935 TSHBP01222 138 aa9.48□□□□□ -0.89
DDX11-217ENST00000540935 SLPIP03973 132 aa9.48□□□□□ -0.89
DDX11-217ENST00000540935 POLR2KP53803 58 aaKnown RBP9.48□□□□□ -0.89
DDX11-217ENST00000540935 AMN1Q8IY45 258 aa9.48□□□□□ -0.89
DDX11-217ENST00000540935 C15orf56Q8N910 161 aa9.48□□□□□ -0.89
DDX11-217ENST00000540935 NUP35Q8NFH5 326 aa9.48□□□□□ -0.89
DDX11-217ENST00000540935 SMDT1Q9H4I9 107 aa9.48□□□□□ -0.89
DDX11-217ENST00000540935 NAT8Q9UHE5 227 aa9.48□□□□□ -0.89
DDX11-217ENST00000540935 NAT8BQ9UHF3 227 aa9.48□□□□□ -0.89
DDX11-217ENST00000540935 GAS8-AS1O95177 125 aa9.47□□□□□ -0.89
DDX11-217ENST00000540935 OXTP01178 125 aa9.47□□□□□ -0.89
DDX11-217ENST00000540935 RPL23P62829 140 aaKnown RBP9.47□□□□□ -0.89
DDX11-217ENST00000540935 MRPL52Q86TS9 123 aaKnown RBP9.47□□□□□ -0.89
DDX11-217ENST00000540935 TMEM242Q9NWH2 141 aa9.47□□□□□ -0.89
DDX11-217ENST00000540935 GVQW2A0A096LPI5 108 aaPredicted RBP9.46□□□□□ -0.9
DDX11-217ENST00000540935 C7orf77A4D0Y5 90 aa9.46□□□□□ -0.9
DDX11-217ENST00000540935 PANO1I0J062 215 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms