RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 SSPOA2VEC9 5147 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 GVQW2A0A096LPI5 108 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-214ENST00000540865 TRAV1-1A0A0B4J248 108 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 IGHV1-24A0A0C4DH33 117 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 TRBV6-1A0A0K0K1D8 114 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 NAP1L6A6NFF2 107 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 FAM25EA8MYX2 175 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 B4DEV8 164 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 KRBOX1C9JBD0 128 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 H0Y9J4 135 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 M0R381 172 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 MT-ND6P03923 174 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 TPT1P13693 172 aaKnown RBP2.75□□□□□ -1.97
SNHG1-214ENST00000540865 RPL13AP40429 203 aaKnown RBP2.75□□□□□ -1.97
SNHG1-214ENST00000540865 RAB5CP51148 216 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 FLI1Q01543 452 aaPredicted RBP2.75□□□□□ -1.97
SNHG1-214ENST00000540865 HIGD2BQ4VC39 106 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 PRNTQ86SH4 94 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 ZFP82Q8N141 532 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 C5orf17Q8NAS9 161 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 OR5C1Q8NGR4 320 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 SUN5Q8TC36 379 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 KRTAP4-4Q9BYR3 166 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 GFRA4Q9GZZ7 299 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 PHLDA3Q9Y5J5 127 aa2.75□□□□□ -1.97
SNHG1-214ENST00000540865 IGLV4-60A0A075B6I1 120 aa2.74□□□□□ -1.97
SNHG1-214ENST00000540865 SMIM1B2RUZ4 78 aa2.74□□□□□ -1.97
SNHG1-214ENST00000540865 IGLV7-43P04211 117 aa2.74□□□□□ -1.97
SNHG1-214ENST00000540865 KRTAP1-4P0C5Y4 121 aa2.74□□□□□ -1.97
SNHG1-214ENST00000540865 KRTAP5-9P26371 169 aa2.74□□□□□ -1.97
SNHG1-214ENST00000540865 UBE2D1P51668 147 aa2.74□□□□□ -1.97
SNHG1-214ENST00000540865 IL15RAQ13261 267 aa2.74□□□□□ -1.97
SNHG1-214ENST00000540865 CNPY1Q3B7I2 92 aa2.74□□□□□ -1.97
SNHG1-214ENST00000540865 C1orf137Q5JT78 98 aa2.74□□□□□ -1.97
SNHG1-214ENST00000540865 AQP10Q96PS8 301 aa2.74□□□□□ -1.97
SNHG1-214ENST00000540865 EPDR1Q9UM22 224 aa2.74□□□□□ -1.97
SNHG1-214ENST00000540865 CARHSP1Q9Y2V2 147 aaKnown RBP2.74□□□□□ -1.97
SNHG1-214ENST00000540865 A0A1W2PNN7 141 aa2.73□□□□□ -1.97
SNHG1-214ENST00000540865 A0A1W2PPV4 95 aa2.73□□□□□ -1.97
SNHG1-214ENST00000540865 GRIFINA4D1Z8 144 aa2.73□□□□□ -1.97
SNHG1-214ENST00000540865 EIF3GO75821 320 aaKnown RBP eCLIP2.73□□□□□ -1.97
SNHG1-214ENST00000540865 SULT1A2P50226 295 aa2.73□□□□□ -1.97
SNHG1-214ENST00000540865 TMBIM6P55061 237 aa2.73□□□□□ -1.97
SNHG1-214ENST00000540865 ZNF56Q15929 161 aa2.73□□□□□ -1.97
SNHG1-214ENST00000540865 KRTAP5-4Q6L8H1 288 aa2.73□□□□□ -1.97
SNHG1-214ENST00000540865 V9GYH0 126 aa2.73□□□□□ -1.97
SNHG1-214ENST00000540865 CENPXA8MT69 81 aa2.72□□□□□ -1.97
SNHG1-214ENST00000540865 H3BMQ9 156 aa2.72□□□□□ -1.97
SNHG1-214ENST00000540865 M0R036 132 aa2.72□□□□□ -1.97
SNHG1-214ENST00000540865 TSPAN13O95857 204 aa2.72□□□□□ -1.97
SNHG1-214ENST00000540865 BTCP35070 178 aa2.72□□□□□ -1.97
SNHG1-214ENST00000540865 CRIP1P50238 77 aa2.72□□□□□ -1.97
SNHG1-214ENST00000540865 ZNF674Q2M3X9 581 aa2.72□□□□□ -1.97
SNHG1-214ENST00000540865 C9orf116Q5BN46 136 aaPredicted RBP2.72□□□□□ -1.97
SNHG1-214ENST00000540865 COX8CQ7Z4L0 72 aa2.72□□□□□ -1.97
SNHG1-214ENST00000540865 CHCHD10Q8WYQ3 142 aaPredicted RBP2.72□□□□□ -1.97
SNHG1-214ENST00000540865 CARD19Q96LW7 228 aa2.72□□□□□ -1.97
SNHG1-214ENST00000540865 TMEM243Q9BU79 118 aa2.72□□□□□ -1.97
SNHG1-214ENST00000540865 MED28Q9H204 178 aa2.72□□□□□ -1.97
SNHG1-214ENST00000540865 ARL2-SNX15V9GYD0 113 aa2.72□□□□□ -1.97
SNHG1-214ENST00000540865 SYNE2Q8WXH0 6885 aaKnown RBP2.72□□□□□ -1.97
SNHG1-214ENST00000540865 TRAV34A0A0B4J273 112 aa2.71□□□□□ -1.98
SNHG1-214ENST00000540865 IGHV1-58A0A0C4DH39 117 aa2.71□□□□□ -1.98
SNHG1-214ENST00000540865 LOC107984640A0A0U1RRK4 108 aa2.71□□□□□ -1.98
SNHG1-214ENST00000540865 UBE2L6O14933 153 aa2.71□□□□□ -1.98
SNHG1-214ENST00000540865 SH2D1AO60880 128 aa2.71□□□□□ -1.98
SNHG1-214ENST00000540865 STAG3L2P0CL84 134 aa2.71□□□□□ -1.98
SNHG1-214ENST00000540865 STAG3L3P0CL85 134 aa2.71□□□□□ -1.98
SNHG1-214ENST00000540865 ARL14EPLP0DKL9 152 aa2.71□□□□□ -1.98
SNHG1-214ENST00000540865 MT3P25713 68 aa2.71□□□□□ -1.98
SNHG1-214ENST00000540865 EIF5AP63241 154 aaKnown RBP2.71□□□□□ -1.98
SNHG1-214ENST00000540865 CYCSP99999 105 aaKnown RBP2.71□□□□□ -1.98
SNHG1-214ENST00000540865 SYCNQ0VAF6 134 aa2.71□□□□□ -1.98
SNHG1-214ENST00000540865 TPRXLQ17RH7 258 aa2.71□□□□□ -1.98
SNHG1-214ENST00000540865 FAM162BQ5T6X4 162 aa2.71□□□□□ -1.98
SNHG1-214ENST00000540865 TRIQKQ629K1 86 aa2.71□□□□□ -1.98
SNHG1-214ENST00000540865 PHF5AQ7RTV0 110 aaKnown RBP2.71□□□□□ -1.98
SNHG1-214ENST00000540865 SCGB1C1Q8TD33 95 aa2.71□□□□□ -1.98
SNHG1-214ENST00000540865 TSKUQ8WUA8 353 aa2.71□□□□□ -1.98
SNHG1-214ENST00000540865 ZNF471Q9BX82 626 aaPredicted RBP2.71□□□□□ -1.98
SNHG1-214ENST00000540865 ZFP30Q9Y2G7 519 aa2.71□□□□□ -1.98
SNHG1-214ENST00000540865 A0A087WZ39 114 aa2.7□□□□□ -1.98
SNHG1-214ENST00000540865 TMSB15BA0A087X1C1 80 aa2.7□□□□□ -1.98
SNHG1-214ENST00000540865 IGLV9-49A0A0B4J1Y8 123 aa2.7□□□□□ -1.98
SNHG1-214ENST00000540865 IGKV3OR2-268A0A0C4DH90 116 aa2.7□□□□□ -1.98
SNHG1-214ENST00000540865 HMGB3O15347 200 aaKnown RBP2.7□□□□□ -1.98
SNHG1-214ENST00000540865 CXCL1P09341 107 aa2.7□□□□□ -1.98
SNHG1-214ENST00000540865 FGF6P10767 208 aa2.7□□□□□ -1.98
SNHG1-214ENST00000540865 GCHFRP30047 84 aa2.7□□□□□ -1.98
SNHG1-214ENST00000540865 RPL12P30050 165 aaKnown RBP2.7□□□□□ -1.98
SNHG1-214ENST00000540865 S100A5P33763 92 aa2.7□□□□□ -1.98
SNHG1-214ENST00000540865 PET117Q6UWS5 81 aa2.7□□□□□ -1.98
SNHG1-214ENST00000540865 Q86TA4 180 aa2.7□□□□□ -1.98
SNHG1-214ENST00000540865 OR10AG1Q8NH19 301 aa2.7□□□□□ -1.98
SNHG1-214ENST00000540865 ISOC2Q96AB3 205 aa2.7□□□□□ -1.98
SNHG1-214ENST00000540865 PGLYRP4Q96LB8 373 aa2.7□□□□□ -1.98
SNHG1-214ENST00000540865 LITAFQ99732 161 aa2.7□□□□□ -1.98
SNHG1-214ENST00000540865 TMEM167BQ9NRX6 74 aa2.7□□□□□ -1.98
SNHG1-214ENST00000540865 FCGBPQ9Y6R7 5405 aaPredicted RBP2.7□□□□□ -1.98
SNHG1-214ENST00000540865 IGLV4-69A0A075B6H9 119 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms