RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 GFRA4Q9GZZ7 299 aa12.57□□□□□ -0.4
RAB35-204ENST00000540803 SRSF3P84103 164 aaKnown RBP12.56□□□□□ -0.4
RAB35-204ENST00000540803 FAM74A3Q4VXF1 159 aa12.56□□□□□ -0.4
RAB35-204ENST00000540803 ISOC2Q96AB3 205 aa12.56□□□□□ -0.4
RAB35-204ENST00000540803 FAM30AQ9NZY2 134 aa12.56□□□□□ -0.4
RAB35-204ENST00000540803 V9GYV3 84 aa12.56□□□□□ -0.4
RAB35-204ENST00000540803 FAM231BA6NCW3 169 aa12.55□□□□□ -0.4
RAB35-204ENST00000540803 RPL23P62829 140 aaKnown RBP12.55□□□□□ -0.4
RAB35-204ENST00000540803 COTL1Q14019 142 aa12.55□□□□□ -0.4
RAB35-204ENST00000540803 TMEM241Q24JQ0 296 aa12.55□□□□□ -0.4
RAB35-204ENST00000540803 C20orf203Q8NBC4 194 aa12.55□□□□□ -0.4
RAB35-204ENST00000540803 BORCS7Q96B45 105 aa12.55□□□□□ -0.4
RAB35-204ENST00000540803 A0A1B0GUT8 65 aa12.54□□□□□ -0.4
RAB35-204ENST00000540803 A0A1B0GUV1 79 aa12.54□□□□□ -0.4
RAB35-204ENST00000540803 EPM2AB3EWF7 344 aa12.54□□□□□ -0.4
RAB35-204ENST00000540803 IGLV4-60A0A075B6I1 120 aa12.53□□□□□ -0.4
RAB35-204ENST00000540803 HLA-DQA1P01909 254 aa12.53□□□□□ -0.4
RAB35-204ENST00000540803 AMTP48728 403 aa12.53□□□□□ -0.4
RAB35-204ENST00000540803 PEA15Q15121 130 aa12.53□□□□□ -0.4
RAB35-204ENST00000540803 KRTAP26-1Q6PEX3 210 aa12.53□□□□□ -0.4
RAB35-204ENST00000540803 REG3AQ06141 175 aa12.52□□□□□ -0.41
RAB35-204ENST00000540803 LINC01620Q4KN68 170 aa12.52□□□□□ -0.41
RAB35-204ENST00000540803 Q6ZSA8 131 aa12.52□□□□□ -0.41
RAB35-204ENST00000540803 TMEM191AQ9H0A3 160 aa12.52□□□□□ -0.41
RAB35-204ENST00000540803 SMDT1Q9H4I9 107 aa12.52□□□□□ -0.41
RAB35-204ENST00000540803 NAT8Q9UHE5 227 aa12.52□□□□□ -0.41
RAB35-204ENST00000540803 UBE2L6O14933 153 aa12.51□□□□□ -0.41
RAB35-204ENST00000540803 GAS8-AS1O95177 125 aa12.51□□□□□ -0.41
RAB35-204ENST00000540803 SMR3BP02814 79 aaPredicted RBP12.51□□□□□ -0.41
RAB35-204ENST00000540803 ADIRFQ15847 76 aa12.51□□□□□ -0.41
RAB35-204ENST00000540803 NUP35Q8NFH5 326 aa12.51□□□□□ -0.41
RAB35-204ENST00000540803 SDHAF1A6NFY7 115 aa12.5□□□□□ -0.41
RAB35-204ENST00000540803 USP17L23D6RBM5 183 aa12.5□□□□□ -0.41
RAB35-204ENST00000540803 C14orf177Q52M58 125 aa12.5□□□□□ -0.41
RAB35-204ENST00000540803 Q5VSD8 79 aa12.5□□□□□ -0.41
RAB35-204ENST00000540803 RNF185Q96GF1 192 aa12.5□□□□□ -0.41
RAB35-204ENST00000540803 IGLV10-54A0A075B6I4 117 aa12.49□□□□□ -0.41
RAB35-204ENST00000540803 TRBV6-5A0A0K0K1A5 114 aa12.49□□□□□ -0.41
RAB35-204ENST00000540803 NCR2O95944 276 aa12.49□□□□□ -0.41
RAB35-204ENST00000540803 RAB4AP20338 218 aa12.48□□□□□ -0.41
RAB35-204ENST00000540803 AMN1Q8IY45 258 aa12.48□□□□□ -0.41
RAB35-204ENST00000540803 TRAV8-4A0A0B4J246 113 aa12.47□□□□□ -0.41
RAB35-204ENST00000540803 APCSP02743 223 aa12.47□□□□□ -0.41
RAB35-204ENST00000540803 RIGQ13278 110 aa12.47□□□□□ -0.41
RAB35-204ENST00000540803 NAT8BQ9UHF3 227 aa12.47□□□□□ -0.41
RAB35-204ENST00000540803 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.46□□□□□ -0.41
RAB35-204ENST00000540803 IGKV2-29A2NJV5 120 aaPredicted RBP12.46□□□□□ -0.41
RAB35-204ENST00000540803 I3L3M4 83 aa12.46□□□□□ -0.41
RAB35-204ENST00000540803 RPS10P46783 165 aaKnown RBP12.46□□□□□ -0.41
RAB35-204ENST00000540803 MRAP2Q96G30 205 aa12.46□□□□□ -0.41
RAB35-204ENST00000540803 SMIM27A0A1W2PRY6 76 aa12.45□□□□□ -0.42
RAB35-204ENST00000540803 PRSS1P07477 247 aa12.45□□□□□ -0.42
RAB35-204ENST00000540803 PMCHP20382 165 aa12.45□□□□□ -0.42
RAB35-204ENST00000540803 ST20Q9HBF5 79 aa12.45□□□□□ -0.42
RAB35-204ENST00000540803 H7C423 109 aa12.44□□□□□ -0.42
RAB35-204ENST00000540803 SMKR1H3BMG3 65 aa12.43□□□□□ -0.42
RAB35-204ENST00000540803 TSHBP01222 138 aa12.43□□□□□ -0.42
RAB35-204ENST00000540803 POLR2KP53803 58 aaKnown RBP12.43□□□□□ -0.42
RAB35-204ENST00000540803 AMMECR1LQ6DCA0 310 aa12.43□□□□□ -0.42
RAB35-204ENST00000540803 TMEM242Q9NWH2 141 aa12.43□□□□□ -0.42
RAB35-204ENST00000540803 FAM229AH3BQW9 127 aa12.42□□□□□ -0.42
RAB35-204ENST00000540803 FGF6P10767 208 aa12.42□□□□□ -0.42
RAB35-204ENST00000540803 ESDP10768 282 aa12.42□□□□□ -0.42
RAB35-204ENST00000540803 RNASEKQ6P5S7 137 aaKnown RBP12.42□□□□□ -0.42
RAB35-204ENST00000540803 TRBV27A0A0K0K1C4 114 aa12.41□□□□□ -0.42
RAB35-204ENST00000540803 SCXQ7RTU7 201 aa12.41□□□□□ -0.42
RAB35-204ENST00000540803 NRACQ8N912 160 aa12.41□□□□□ -0.42
RAB35-204ENST00000540803 SRRM2Q9UQ35 2752 aaKnown RBP12.4□□□□□ -0.42
RAB35-204ENST00000540803 IGKV3OR2-268A0A0C4DH90 116 aa12.4□□□□□ -0.42
RAB35-204ENST00000540803 INAFM2P0DMQ5 153 aa12.4□□□□□ -0.42
RAB35-204ENST00000540803 FAM104BQ5XKR9 115 aa12.4□□□□□ -0.42
RAB35-204ENST00000540803 DGAT2L7PQ6IED9 249 aa12.4□□□□□ -0.42
RAB35-204ENST00000540803 CLRN3Q8NCR9 226 aa12.4□□□□□ -0.42
RAB35-204ENST00000540803 MYCBP2O75592 4640 aa12.39□□□□□ -0.43
RAB35-204ENST00000540803 ZNF25P17030 456 aaPredicted RBP12.39□□□□□ -0.43
RAB35-204ENST00000540803 CAMPP49913 170 aa12.39□□□□□ -0.43
RAB35-204ENST00000540803 MRPL51Q4U2R6 128 aaKnown RBP12.39□□□□□ -0.43
RAB35-204ENST00000540803 CHAC1Q9BUX1 264 aa12.39□□□□□ -0.43
RAB35-204ENST00000540803 C9orf163Q8N9P6 203 aa12.38□□□□□ -0.43
RAB35-204ENST00000540803 A0A1B0GW15 77 aa12.37□□□□□ -0.43
RAB35-204ENST00000540803 GAGE12HA6NDE8 117 aa12.37□□□□□ -0.43
RAB35-204ENST00000540803 PPP1R17O96001 155 aa12.37□□□□□ -0.43
RAB35-204ENST00000540803 RAB14P61106 215 aa12.37□□□□□ -0.43
RAB35-204ENST00000540803 SUMO2P61956 95 aaKnown RBP12.37□□□□□ -0.43
RAB35-204ENST00000540803 hDV102S1A0JD36 115 aa12.36□□□□□ -0.43
RAB35-204ENST00000540803 VCYO14598 125 aa12.36□□□□□ -0.43
RAB35-204ENST00000540803 MRPL54Q6P161 138 aaKnown RBP12.36□□□□□ -0.43
RAB35-204ENST00000540803 LINC00528Q8N1L1 170 aa12.36□□□□□ -0.43
RAB35-204ENST00000540803 CIRBP-AS1Q8TBR5 109 aa12.36□□□□□ -0.43
RAB35-204ENST00000540803 CHCHD10Q8WYQ3 142 aaPredicted RBP12.36□□□□□ -0.43
RAB35-204ENST00000540803 A0A1B0GXF2 115 aa12.35□□□□□ -0.43
RAB35-204ENST00000540803 C7orf77A4D0Y5 90 aa12.35□□□□□ -0.43
RAB35-204ENST00000540803 CNBPP62633 177 aaKnown RBP12.35□□□□□ -0.43
RAB35-204ENST00000540803 OR5A1Q8NGJ0 315 aa12.35□□□□□ -0.43
RAB35-204ENST00000540803 TMEM101Q96IK0 257 aa12.35□□□□□ -0.43
RAB35-204ENST00000540803 BTF3L4Q96K17 158 aa12.35□□□□□ -0.43
RAB35-204ENST00000540803 LINC00862A6NCI5 91 aa12.34□□□□□ -0.43
RAB35-204ENST00000540803 SLPIP03973 132 aa12.34□□□□□ -0.43
RAB35-204ENST00000540803 HBBP68871 147 aa12.34□□□□□ -0.43
RAB35-204ENST00000540803 MRPL52Q86TS9 123 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms