RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 AP5S1Q9NUS5 200 aa8.97□□□□□ -0.97
CCDC42-202ENST00000539522 K7EMI3 77 aa8.96□□□□□ -0.98
CCDC42-202ENST00000539522 GYPEP15421 78 aa8.96□□□□□ -0.98
CCDC42-202ENST00000539522 POLR2KP53803 58 aaKnown RBP8.96□□□□□ -0.98
CCDC42-202ENST00000539522 RHOHQ15669 191 aa8.96□□□□□ -0.98
CCDC42-202ENST00000539522 ESRGQ1W209 222 aa8.96□□□□□ -0.98
CCDC42-202ENST00000539522 PDZD11Q5EBL8 140 aa8.96□□□□□ -0.98
CCDC42-202ENST00000539522 C15orf53Q8NAA6 179 aa8.96□□□□□ -0.98
CCDC42-202ENST00000539522 PRADC1Q9BSG0 188 aa8.96□□□□□ -0.98
CCDC42-202ENST00000539522 TNFRSF18Q9Y5U5 241 aa8.96□□□□□ -0.98
CCDC42-202ENST00000539522 IGLV2-18A0A075B6J9 118 aa8.95□□□□□ -0.98
CCDC42-202ENST00000539522 TRBV10-1A0A0K0K1A3 114 aa8.95□□□□□ -0.98
CCDC42-202ENST00000539522 LGALS9CQ6DKI2 356 aa8.95□□□□□ -0.98
CCDC42-202ENST00000539522 HIST1H2BLQ99880 126 aa8.95□□□□□ -0.98
CCDC42-202ENST00000539522 SMIM2Q9BVW6 85 aa8.95□□□□□ -0.98
CCDC42-202ENST00000539522 LINC00588Q9Y4M8 146 aa8.95□□□□□ -0.98
CCDC42-202ENST00000539522 SDHAF1A6NFY7 115 aa8.94□□□□□ -0.98
CCDC42-202ENST00000539522 IFITM10A6NMD0 228 aa8.94□□□□□ -0.98
CCDC42-202ENST00000539522 TCAPO15273 167 aa8.94□□□□□ -0.98
CCDC42-202ENST00000539522 FABP4P15090 132 aa8.94□□□□□ -0.98
CCDC42-202ENST00000539522 G0S2P27469 103 aa8.94□□□□□ -0.98
CCDC42-202ENST00000539522 AMTP48728 403 aa8.94□□□□□ -0.98
CCDC42-202ENST00000539522 LAGE3Q14657 143 aa8.94□□□□□ -0.98
CCDC42-202ENST00000539522 TMEM70Q9BUB7 260 aa8.94□□□□□ -0.98
CCDC42-202ENST00000539522 DNAH17Q9UFH2 4485 aa8.94□□□□□ -0.98
CCDC42-202ENST00000539522 TRBV27A0A0K0K1C4 114 aa8.93□□□□□ -0.98
CCDC42-202ENST00000539522 I3L3M4 83 aa8.93□□□□□ -0.98
CCDC42-202ENST00000539522 LYPD5Q6UWN5 251 aa8.93□□□□□ -0.98
CCDC42-202ENST00000539522 FAM19A2Q8N3H0 131 aa8.93□□□□□ -0.98
CCDC42-202ENST00000539522 NEXN-AS1Q8NBZ9 246 aa8.93□□□□□ -0.98
CCDC42-202ENST00000539522 KIR2DL4Q99706 377 aa8.93□□□□□ -0.98
CCDC42-202ENST00000539522 ICOSQ9Y6W8 199 aa8.93□□□□□ -0.98
CCDC42-202ENST00000539522 FAT2Q9NYQ8 4349 aa8.92□□□□□ -0.98
CCDC42-202ENST00000539522 LY6G6CO95867 125 aa8.92□□□□□ -0.98
CCDC42-202ENST00000539522 FCER1GP30273 86 aa8.92□□□□□ -0.98
CCDC42-202ENST00000539522 RPL36AP83881 106 aaKnown RBP8.92□□□□□ -0.98
CCDC42-202ENST00000539522 MRPL23Q16540 153 aaKnown RBP8.92□□□□□ -0.98
CCDC42-202ENST00000539522 ORMDL2Q53FV1 153 aa8.92□□□□□ -0.98
CCDC42-202ENST00000539522 RPL36ALQ969Q0 106 aaKnown RBP8.92□□□□□ -0.98
CCDC42-202ENST00000539522 TRBV7-3A0A075B6L6 115 aa8.91□□□□□ -0.98
CCDC42-202ENST00000539522 GAGE12JA6NER3 117 aa8.91□□□□□ -0.98
CCDC42-202ENST00000539522 GAGE1Q13065 139 aa8.91□□□□□ -0.98
CCDC42-202ENST00000539522 GAGE4Q13068 117 aa8.91□□□□□ -0.98
CCDC42-202ENST00000539522 GAGE5Q13069 117 aa8.91□□□□□ -0.98
CCDC42-202ENST00000539522 GAGE13Q4V321 117 aa8.91□□□□□ -0.98
CCDC42-202ENST00000539522 OR10D4PQ8NGN7 298 aa8.91□□□□□ -0.98
CCDC42-202ENST00000539522 ZNRF2Q8NHG8 242 aa8.91□□□□□ -0.98
CCDC42-202ENST00000539522 IGHV1-24A0A0C4DH33 117 aa8.9□□□□□ -0.98
CCDC42-202ENST00000539522 AKR1D1P51857 326 aa8.9□□□□□ -0.98
CCDC42-202ENST00000539522 UBE2D3P61077 147 aa8.9□□□□□ -0.98
CCDC42-202ENST00000539522 UBE2D2P62837 147 aa8.9□□□□□ -0.98
CCDC42-202ENST00000539522 SH2D6Q7Z4S9 175 aa8.9□□□□□ -0.98
CCDC42-202ENST00000539522 HSPB8Q9UJY1 196 aa8.9□□□□□ -0.98
CCDC42-202ENST00000539522 LINC01549A6NIU2 74 aa8.89□□□□□ -0.99
CCDC42-202ENST00000539522 LEPROTL1O95214 131 aa8.89□□□□□ -0.99
CCDC42-202ENST00000539522 HBDP02042 147 aa8.89□□□□□ -0.99
CCDC42-202ENST00000539522 PMCHL1Q16048 86 aa8.89□□□□□ -0.99
CCDC42-202ENST00000539522 NEGR1Q7Z3B1 354 aa8.89□□□□□ -0.99
CCDC42-202ENST00000539522 DAZ4Q86SG3 579 aaKnown RBP8.89□□□□□ -0.99
CCDC42-202ENST00000539522 DAZ3Q9NR90 486 aaKnown RBP8.89□□□□□ -0.99
CCDC42-202ENST00000539522 UPK3BQ9BT76 320 aa8.88□□□□□ -0.99
CCDC42-202ENST00000539522 KRTAP1-5Q9BYS1 174 aa8.88□□□□□ -0.99
CCDC42-202ENST00000539522 MRPS16Q9Y3D3 137 aaKnown RBP8.88□□□□□ -0.99
CCDC42-202ENST00000539522 TSHBP01222 138 aa8.87□□□□□ -0.99
CCDC42-202ENST00000539522 NTM-AS1Q6ZSK4 140 aa8.87□□□□□ -0.99
CCDC42-202ENST00000539522 ATP6V0E2Q8NHE4 81 aa8.87□□□□□ -0.99
CCDC42-202ENST00000539522 DNAH11Q96DT5 4516 aa8.86□□□□□ -0.99
CCDC42-202ENST00000539522 A0A096LNJ9 63 aa8.86□□□□□ -0.99
CCDC42-202ENST00000539522 IGHV3-38A0A0C4DH36 116 aa8.86□□□□□ -0.99
CCDC42-202ENST00000539522 BTF3P20290 206 aaKnown RBP8.86□□□□□ -0.99
CCDC42-202ENST00000539522 TIRAPP58753 221 aa8.86□□□□□ -0.99
CCDC42-202ENST00000539522 COTL1Q14019 142 aa8.86□□□□□ -0.99
CCDC42-202ENST00000539522 WFDC10BQ8IUB3 73 aa8.86□□□□□ -0.99
CCDC42-202ENST00000539522 TOMM6Q96B49 74 aa8.86□□□□□ -0.99
CCDC42-202ENST00000539522 ATP5LO75964 103 aa8.85□□□□□ -0.99
CCDC42-202ENST00000539522 CCL18P55774 89 aa8.85□□□□□ -0.99
CCDC42-202ENST00000539522 TMEM97Q5BJF2 176 aa8.85□□□□□ -0.99
CCDC42-202ENST00000539522 Q6ZR54 194 aa8.85□□□□□ -0.99
CCDC42-202ENST00000539522 Q8N3U1 123 aa8.85□□□□□ -0.99
CCDC42-202ENST00000539522 MAP1LC3CQ9BXW4 147 aa8.85□□□□□ -0.99
CCDC42-202ENST00000539522 GTSF1LQ9H1H1 148 aa8.85□□□□□ -0.99
CCDC42-202ENST00000539522 CYSLTR1Q9Y271 337 aa8.85□□□□□ -0.99
CCDC42-202ENST00000539522 PKD1P98161 4303 aa8.84□□□□□ -0.99
CCDC42-202ENST00000539522 KRTDAPP60985 99 aa8.84□□□□□ -0.99
CCDC42-202ENST00000539522 C2orf66Q6UXQ4 117 aa8.84□□□□□ -0.99
CCDC42-202ENST00000539522 DEFB104AQ8WTQ1 72 aa8.84□□□□□ -0.99
CCDC42-202ENST00000539522 C3orf79P0CE67 100 aa8.83□□□□□ -1
CCDC42-202ENST00000539522 JOSD1Q15040 202 aaPredicted RBP8.83□□□□□ -1
CCDC42-202ENST00000539522 ERASQ7Z444 233 aa8.83□□□□□ -1
CCDC42-202ENST00000539522 UBE2DNLQ8IWF7 75 aa8.83□□□□□ -1
CCDC42-202ENST00000539522 C20orf203Q8NBC4 194 aa8.83□□□□□ -1
CCDC42-202ENST00000539522 IFI27L1Q96BM0 104 aa8.83□□□□□ -1
CCDC42-202ENST00000539522 SCGB3A1Q96QR1 104 aa8.83□□□□□ -1
CCDC42-202ENST00000539522 Q9H8V8 135 aa8.83□□□□□ -1
CCDC42-202ENST00000539522 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.82□□□□□ -1
CCDC42-202ENST00000539522 LELP1Q5T871 98 aa8.82□□□□□ -1
CCDC42-202ENST00000539522 PET117Q6UWS5 81 aa8.82□□□□□ -1
CCDC42-202ENST00000539522 LINC00173Q6ZV60 143 aa8.82□□□□□ -1
CCDC42-202ENST00000539522 SPATA12Q7Z6I5 190 aa8.82□□□□□ -1
CCDC42-202ENST00000539522 TMEM141Q96I45 108 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms