RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 HTN3P15516 51 aa6.42□□□□□ -1.38
RTN4IP1-204ENST00000539449 CRYBA4P53673 196 aa6.42□□□□□ -1.38
RTN4IP1-204ENST00000539449 NANOS2P60321 138 aaKnown RBP6.42□□□□□ -1.38
RTN4IP1-204ENST00000539449 PHLDA1Q8WV24 401 aaPredicted RBP6.42□□□□□ -1.38
RTN4IP1-204ENST00000539449 CHCHD1Q96BP2 118 aaKnown RBP6.42□□□□□ -1.38
RTN4IP1-204ENST00000539449 VSIG2Q96IQ7 327 aa6.42□□□□□ -1.38
RTN4IP1-204ENST00000539449 HIST1H2BLQ99880 126 aa6.42□□□□□ -1.38
RTN4IP1-204ENST00000539449 HHLA3Q9XRX5 114 aa6.42□□□□□ -1.38
RTN4IP1-204ENST00000539449 IGHV1-24A0A0C4DH33 117 aa6.41□□□□□ -1.38
RTN4IP1-204ENST00000539449 TRBV6-4A0A1B0GX49 114 aa6.41□□□□□ -1.38
RTN4IP1-204ENST00000539449 CIDEAO60543 219 aa6.41□□□□□ -1.38
RTN4IP1-204ENST00000539449 HSBP1O75506 76 aa6.41□□□□□ -1.38
RTN4IP1-204ENST00000539449 PPP1R17O96001 155 aa6.41□□□□□ -1.38
RTN4IP1-204ENST00000539449 TSHBP01222 138 aa6.41□□□□□ -1.38
RTN4IP1-204ENST00000539449 ATP5G1P05496 136 aa6.41□□□□□ -1.38
RTN4IP1-204ENST00000539449 FABP4P15090 132 aa6.41□□□□□ -1.38
RTN4IP1-204ENST00000539449 AMTP48728 403 aa6.41□□□□□ -1.38
RTN4IP1-204ENST00000539449 RPL32P62910 135 aaKnown RBP6.41□□□□□ -1.38
RTN4IP1-204ENST00000539449 Q6ZTC4 211 aa6.41□□□□□ -1.38
RTN4IP1-204ENST00000539449 DNAJC30Q96LL9 226 aa6.41□□□□□ -1.38
RTN4IP1-204ENST00000539449 NXT2Q9NPJ8 142 aaKnown RBP6.41□□□□□ -1.38
RTN4IP1-204ENST00000539449 TNFRSF18Q9Y5U5 241 aa6.41□□□□□ -1.38
RTN4IP1-204ENST00000539449 A0A0J9YY99 117 aa6.4□□□□□ -1.38
RTN4IP1-204ENST00000539449 TRBV27A0A0K0K1C4 114 aa6.4□□□□□ -1.38
RTN4IP1-204ENST00000539449 F5H768 121 aa6.4□□□□□ -1.38
RTN4IP1-204ENST00000539449 VCYO14598 125 aa6.4□□□□□ -1.38
RTN4IP1-204ENST00000539449 LINC00694P0DN24 101 aa6.4□□□□□ -1.38
RTN4IP1-204ENST00000539449 UBE2D3P61077 147 aa6.4□□□□□ -1.38
RTN4IP1-204ENST00000539449 UBE2D2P62837 147 aa6.4□□□□□ -1.38
RTN4IP1-204ENST00000539449 ZMAT4Q9H898 229 aa6.4□□□□□ -1.38
RTN4IP1-204ENST00000539449 AP5S1Q9NUS5 200 aa6.4□□□□□ -1.38
RTN4IP1-204ENST00000539449 TRBV7-3A0A075B6L6 115 aa6.39□□□□□ -1.39
RTN4IP1-204ENST00000539449 TRBV10-1A0A0K0K1A3 114 aa6.39□□□□□ -1.39
RTN4IP1-204ENST00000539449 I3L3M4 83 aa6.39□□□□□ -1.39
RTN4IP1-204ENST00000539449 PAX4O43316 350 aa6.39□□□□□ -1.39
RTN4IP1-204ENST00000539449 GYPEP15421 78 aa6.39□□□□□ -1.39
RTN4IP1-204ENST00000539449 S100A2P29034 98 aa6.39□□□□□ -1.39
RTN4IP1-204ENST00000539449 FCER1GP30273 86 aa6.39□□□□□ -1.39
RTN4IP1-204ENST00000539449 RPL36AP83881 106 aaKnown RBP6.39□□□□□ -1.39
RTN4IP1-204ENST00000539449 LAGE3Q14657 143 aa6.39□□□□□ -1.39
RTN4IP1-204ENST00000539449 RHOHQ15669 191 aa6.39□□□□□ -1.39
RTN4IP1-204ENST00000539449 NTM-AS1Q6ZSK4 140 aa6.39□□□□□ -1.39
RTN4IP1-204ENST00000539449 OR10D4PQ8NGN7 298 aa6.39□□□□□ -1.39
RTN4IP1-204ENST00000539449 C11orf45Q8TAV5 145 aa6.39□□□□□ -1.39
RTN4IP1-204ENST00000539449 RPL36ALQ969Q0 106 aaKnown RBP6.39□□□□□ -1.39
RTN4IP1-204ENST00000539449 PRO0255Q9UI72 69 aa6.39□□□□□ -1.39
RTN4IP1-204ENST00000539449 TRAV26-1A0A087WT03 109 aa6.38□□□□□ -1.39
RTN4IP1-204ENST00000539449 TEX48A0A1B0GUV7 120 aa6.38□□□□□ -1.39
RTN4IP1-204ENST00000539449 TMEM18Q96B42 140 aa6.38□□□□□ -1.39
RTN4IP1-204ENST00000539449 PRADC1Q9BSG0 188 aa6.38□□□□□ -1.39
RTN4IP1-204ENST00000539449 HERC1Q15751 4861 aa6.37□□□□□ -1.39
RTN4IP1-204ENST00000539449 A0A096LPF7 62 aa6.37□□□□□ -1.39
RTN4IP1-204ENST00000539449 AKR1D1P51857 326 aa6.37□□□□□ -1.39
RTN4IP1-204ENST00000539449 RPL39P62891 51 aaKnown RBP6.37□□□□□ -1.39
RTN4IP1-204ENST00000539449 SPATA12Q7Z6I5 190 aa6.37□□□□□ -1.39
RTN4IP1-204ENST00000539449 PACRGQ96M98 296 aaPredicted RBP6.37□□□□□ -1.39
RTN4IP1-204ENST00000539449 CHCHD7Q9BUK0 85 aa6.37□□□□□ -1.39
RTN4IP1-204ENST00000539449 NUDT3O95989 172 aa6.36□□□□□ -1.39
RTN4IP1-204ENST00000539449 HBDP02042 147 aa6.36□□□□□ -1.39
RTN4IP1-204ENST00000539449 C3orf79P0CE67 100 aa6.36□□□□□ -1.39
RTN4IP1-204ENST00000539449 BTF3P20290 206 aaKnown RBP6.36□□□□□ -1.39
RTN4IP1-204ENST00000539449 KIR2DL4Q99706 377 aa6.36□□□□□ -1.39
RTN4IP1-204ENST00000539449 UBR4Q5T4S7 5183 aa6.36□□□□□ -1.39
RTN4IP1-204ENST00000539449 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.35□□□□□ -1.39
RTN4IP1-204ENST00000539449 DEFB131BA0A096LNP1 70 aa6.35□□□□□ -1.39
RTN4IP1-204ENST00000539449 IGKV2-29A2NJV5 120 aaPredicted RBP6.35□□□□□ -1.39
RTN4IP1-204ENST00000539449 LEPROTL1O95214 131 aa6.35□□□□□ -1.39
RTN4IP1-204ENST00000539449 ORMDL2Q53FV1 153 aa6.35□□□□□ -1.39
RTN4IP1-204ENST00000539449 ZC2HC1BQ5TFG8 222 aa6.35□□□□□ -1.39
RTN4IP1-204ENST00000539449 C2orf66Q6UXQ4 117 aa6.35□□□□□ -1.39
RTN4IP1-204ENST00000539449 Q8N976 141 aa6.35□□□□□ -1.39
RTN4IP1-204ENST00000539449 C20orf203Q8NBC4 194 aa6.35□□□□□ -1.39
RTN4IP1-204ENST00000539449 ATP6V0E2Q8NHE4 81 aa6.35□□□□□ -1.39
RTN4IP1-204ENST00000539449 TOMM6Q96B49 74 aa6.35□□□□□ -1.39
RTN4IP1-204ENST00000539449 OPRPNQ99935 248 aaPredicted RBP6.35□□□□□ -1.39
RTN4IP1-204ENST00000539449 KMT2AQ03164 3969 aa6.35□□□□□ -1.39
RTN4IP1-204ENST00000539449 K7EMI3 77 aa6.34□□□□□ -1.39
RTN4IP1-204ENST00000539449 KRTDAPP60985 99 aa6.34□□□□□ -1.39
RTN4IP1-204ENST00000539449 COTL1Q14019 142 aa6.34□□□□□ -1.39
RTN4IP1-204ENST00000539449 CDPF1Q6NVV7 123 aa6.34□□□□□ -1.39
RTN4IP1-204ENST00000539449 CEMP1Q6PRD7 247 aaPredicted RBP6.34□□□□□ -1.39
RTN4IP1-204ENST00000539449 DAZ4Q86SG3 579 aaKnown RBP6.34□□□□□ -1.39
RTN4IP1-204ENST00000539449 FAM104AQ969W3 186 aa6.34□□□□□ -1.39
RTN4IP1-204ENST00000539449 DAZ3Q9NR90 486 aaKnown RBP6.34□□□□□ -1.39
RTN4IP1-204ENST00000539449 TRAV10A0A0B4J240 114 aa6.33□□□□□ -1.4
RTN4IP1-204ENST00000539449 SCGB3A1Q96QR1 104 aa6.33□□□□□ -1.4
RTN4IP1-204ENST00000539449 CYSLTR1Q9Y271 337 aa6.33□□□□□ -1.4
RTN4IP1-204ENST00000539449 IGIPA6NJ69 53 aa6.32□□□□□ -1.4
RTN4IP1-204ENST00000539449 MRPL23Q16540 153 aaKnown RBP6.32□□□□□ -1.4
RTN4IP1-204ENST00000539449 PYY3Q5JQD4 70 aa6.32□□□□□ -1.4
RTN4IP1-204ENST00000539449 IFI27L1Q96BM0 104 aa6.32□□□□□ -1.4
RTN4IP1-204ENST00000539449 GTSF1LQ9H1H1 148 aa6.32□□□□□ -1.4
RTN4IP1-204ENST00000539449 HSPB8Q9UJY1 196 aa6.32□□□□□ -1.4
RTN4IP1-204ENST00000539449 ICOSQ9Y6W8 199 aa6.32□□□□□ -1.4
RTN4IP1-204ENST00000539449 TRBV6-8A0A0A6YYG3 113 aa6.31□□□□□ -1.4
RTN4IP1-204ENST00000539449 H0Y8G0 127 aa6.31□□□□□ -1.4
RTN4IP1-204ENST00000539449 SYS1-DBNDD2H3BUS1 97 aa6.31□□□□□ -1.4
RTN4IP1-204ENST00000539449 GAGE6Q13070 117 aa6.31□□□□□ -1.4
RTN4IP1-204ENST00000539449 JOSD1Q15040 202 aaPredicted RBP6.31□□□□□ -1.4
RTN4IP1-204ENST00000539449 LYPD5Q6UWN5 251 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms