RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.54□□□□□ -1.2
YBX3-207ENST00000539204 SERTM2A0A1B0GWG4 89 aa7.54□□□□□ -1.2
YBX3-207ENST00000539204 ANGP03950 147 aaKnown RBP7.54□□□□□ -1.2
YBX3-207ENST00000539204 TCRAP04437 139 aa7.54□□□□□ -1.2
YBX3-207ENST00000539204 LCE2AQ5TA79 106 aaPredicted RBP7.54□□□□□ -1.2
YBX3-207ENST00000539204 FAM231DQ6ZW35 169 aa7.54□□□□□ -1.2
YBX3-207ENST00000539204 BAGE2Q86Y30 109 aa7.54□□□□□ -1.2
YBX3-207ENST00000539204 CMTM2Q8TAZ6 248 aa7.54□□□□□ -1.2
YBX3-207ENST00000539204 MLST8Q9BVC4 326 aa7.54□□□□□ -1.2
YBX3-207ENST00000539204 BIN3Q9NQY0 253 aa7.54□□□□□ -1.2
YBX3-207ENST00000539204 TGIF2-C20orf24A0A0A6YYL0 155 aa7.53□□□□□ -1.2
YBX3-207ENST00000539204 hDV102S1A0JD36 115 aa7.53□□□□□ -1.2
YBX3-207ENST00000539204 RPS10P46783 165 aaKnown RBP7.53□□□□□ -1.2
YBX3-207ENST00000539204 UBE2G1P62253 170 aa7.53□□□□□ -1.2
YBX3-207ENST00000539204 IL36BQ9NZH7 164 aa7.53□□□□□ -1.2
YBX3-207ENST00000539204 K7EQM0 130 aa7.52□□□□□ -1.21
YBX3-207ENST00000539204 LTAP01374 205 aa7.52□□□□□ -1.21
YBX3-207ENST00000539204 RNASE3P12724 160 aaKnown RBP7.52□□□□□ -1.21
YBX3-207ENST00000539204 PIK3CD-AS1Q5SR53 167 aa7.52□□□□□ -1.21
YBX3-207ENST00000539204 UFSP1Q6NVU6 142 aa7.52□□□□□ -1.21
YBX3-207ENST00000539204 TMEM75Q8N9X5 138 aa7.52□□□□□ -1.21
YBX3-207ENST00000539204 AP5S1Q9NUS5 200 aa7.52□□□□□ -1.21
YBX3-207ENST00000539204 C11orf21Q9P2W6 132 aa7.52□□□□□ -1.21
YBX3-207ENST00000539204 ZFP30Q9Y2G7 519 aa7.52□□□□□ -1.21
YBX3-207ENST00000539204 V9GYV3 84 aa7.52□□□□□ -1.21
YBX3-207ENST00000539204 TRAV34A0A0B4J273 112 aa7.51□□□□□ -1.21
YBX3-207ENST00000539204 GNG5P63218 68 aa7.51□□□□□ -1.21
YBX3-207ENST00000539204 MPV17L2Q567V2 206 aa7.51□□□□□ -1.21
YBX3-207ENST00000539204 GOLT1AQ6ZVE7 132 aa7.51□□□□□ -1.21
YBX3-207ENST00000539204 JPT2Q9H910 190 aa7.51□□□□□ -1.21
YBX3-207ENST00000539204 SMIM27A0A1W2PRY6 76 aa7.5□□□□□ -1.21
YBX3-207ENST00000539204 SRSF9Q13242 221 aaKnown RBP eCLIP7.5□□□□□ -1.21
YBX3-207ENST00000539204 COX8CQ7Z4L0 72 aa7.5□□□□□ -1.21
YBX3-207ENST00000539204 NDFIP1Q9BT67 221 aa7.5□□□□□ -1.21
YBX3-207ENST00000539204 A0A087WWL8 130 aa7.49□□□□□ -1.21
YBX3-207ENST00000539204 TRBV6-8A0A0A6YYG3 113 aa7.49□□□□□ -1.21
YBX3-207ENST00000539204 C19orf71A6NCJ1 209 aa7.49□□□□□ -1.21
YBX3-207ENST00000539204 H7C1H1 209 aa7.49□□□□□ -1.21
YBX3-207ENST00000539204 RHODO00212 210 aa7.49□□□□□ -1.21
YBX3-207ENST00000539204 S100A4P26447 101 aaKnown RBP7.49□□□□□ -1.21
YBX3-207ENST00000539204 ZNF80P51504 273 aaPredicted RBP7.49□□□□□ -1.21
YBX3-207ENST00000539204 RPL36AP83881 106 aaKnown RBP7.49□□□□□ -1.21
YBX3-207ENST00000539204 MAJINQ3KP22 176 aa7.49□□□□□ -1.21
YBX3-207ENST00000539204 COX19Q49B96 90 aa7.49□□□□□ -1.21
YBX3-207ENST00000539204 CT83Q5H943 113 aa7.49□□□□□ -1.21
YBX3-207ENST00000539204 KRTAP26-1Q6PEX3 210 aa7.49□□□□□ -1.21
YBX3-207ENST00000539204 Q86TA4 180 aa7.49□□□□□ -1.21
YBX3-207ENST00000539204 RPL36ALQ969Q0 106 aaKnown RBP7.49□□□□□ -1.21
YBX3-207ENST00000539204 TRBV7-3A0A075B6L6 115 aa7.48□□□□□ -1.21
YBX3-207ENST00000539204 FAM231BA6NCW3 169 aa7.48□□□□□ -1.21
YBX3-207ENST00000539204 C5orf52A6NGY3 159 aa7.48□□□□□ -1.21
YBX3-207ENST00000539204 GATCO43716 136 aaKnown RBP7.48□□□□□ -1.21
YBX3-207ENST00000539204 SLPIP03973 132 aa7.48□□□□□ -1.21
YBX3-207ENST00000539204 TRGC2P03986 189 aa7.48□□□□□ -1.21
YBX3-207ENST00000539204 PKIAP61925 76 aa7.48□□□□□ -1.21
YBX3-207ENST00000539204 NUDT10Q8NFP7 164 aa7.48□□□□□ -1.21
YBX3-207ENST00000539204 NUDT11Q96G61 164 aa7.48□□□□□ -1.21
YBX3-207ENST00000539204 SGK494Q96LW2 274 aa7.48□□□□□ -1.21
YBX3-207ENST00000539204 RNASE7Q9H1E1 156 aaKnown RBP7.48□□□□□ -1.21
YBX3-207ENST00000539204 PRR34Q9NV39 138 aa7.48□□□□□ -1.21
YBX3-207ENST00000539204 PSG8Q9UQ74 426 aa7.48□□□□□ -1.21
YBX3-207ENST00000539204 TRBV10-1A0A0K0K1A3 114 aa7.47□□□□□ -1.21
YBX3-207ENST00000539204 S100A6P06703 90 aa7.47□□□□□ -1.21
YBX3-207ENST00000539204 UBE2D3P61077 147 aa7.47□□□□□ -1.21
YBX3-207ENST00000539204 UBE2D2P62837 147 aa7.47□□□□□ -1.21
YBX3-207ENST00000539204 COX6A2Q02221 97 aa7.47□□□□□ -1.21
YBX3-207ENST00000539204 SAPCD1Q5SSQ6 148 aa7.47□□□□□ -1.21
YBX3-207ENST00000539204 FAM74A4Q5TZK3 123 aa7.47□□□□□ -1.21
YBX3-207ENST00000539204 RASL11AQ6T310 242 aa7.47□□□□□ -1.21
YBX3-207ENST00000539204 ZFP82Q8N141 532 aa7.47□□□□□ -1.21
YBX3-207ENST00000539204 LINC00269Q8N2A0 174 aa7.47□□□□□ -1.21
YBX3-207ENST00000539204 STPG4Q8N801 248 aa7.47□□□□□ -1.21
YBX3-207ENST00000539204 CHCHD5Q9BSY4 110 aa7.47□□□□□ -1.21
YBX3-207ENST00000539204 A8MWL6 223 aa7.46□□□□□ -1.22
YBX3-207ENST00000539204 HIST1H2BKO60814 126 aa7.46□□□□□ -1.22
YBX3-207ENST00000539204 HIST1H2BJP06899 126 aa7.46□□□□□ -1.22
YBX3-207ENST00000539204 HIST1H2BOP23527 126 aa7.46□□□□□ -1.22
YBX3-207ENST00000539204 HIST1H2BBP33778 126 aa7.46□□□□□ -1.22
YBX3-207ENST00000539204 HIST1H2BDP58876 126 aa7.46□□□□□ -1.22
YBX3-207ENST00000539204 HIST1H2BCP62807 126 aa7.46□□□□□ -1.22
YBX3-207ENST00000539204 HIST2H2BEQ16778 126 aa7.46□□□□□ -1.22
YBX3-207ENST00000539204 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.46□□□□□ -1.22
YBX3-207ENST00000539204 CLPSL2Q6UWE3 100 aa7.46□□□□□ -1.22
YBX3-207ENST00000539204 TSKUQ8WUA8 353 aa7.46□□□□□ -1.22
YBX3-207ENST00000539204 HIST1H2BHQ93079 126 aa7.46□□□□□ -1.22
YBX3-207ENST00000539204 HIST1H2BNQ99877 126 aa7.46□□□□□ -1.22
YBX3-207ENST00000539204 HIST1H2BMQ99879 126 aa7.46□□□□□ -1.22
YBX3-207ENST00000539204 GFRA4Q9GZZ7 299 aa7.46□□□□□ -1.22
YBX3-207ENST00000539204 IGKV2-24A0A0C4DH68 120 aa7.45□□□□□ -1.22
YBX3-207ENST00000539204 MUC21A0A0G2JKD1 596 aa7.45□□□□□ -1.22
YBX3-207ENST00000539204 MT-ND6P03923 174 aa7.45□□□□□ -1.22
YBX3-207ENST00000539204 TRGC1P0CF51 173 aa7.45□□□□□ -1.22
YBX3-207ENST00000539204 SNRPEP62304 92 aaKnown RBP7.45□□□□□ -1.22
YBX3-207ENST00000539204 SMUG1Q53HV7 270 aa7.45□□□□□ -1.22
YBX3-207ENST00000539204 COA6Q5JTJ3 125 aaKnown RBP7.45□□□□□ -1.22
YBX3-207ENST00000539204 Q6ZRP5 223 aa7.45□□□□□ -1.22
YBX3-207ENST00000539204 PRNTQ86SH4 94 aa7.45□□□□□ -1.22
YBX3-207ENST00000539204 GNB1LQ9BYB4 327 aa7.45□□□□□ -1.22
YBX3-207ENST00000539204 RPP21Q9H633 154 aaKnown RBP7.45□□□□□ -1.22
YBX3-207ENST00000539204 IGLV10-54A0A075B6I4 117 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms