RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 TMSB15BA0A087X1C1 80 aa8.85□□□□□ -0.99
PBX3-212ENST00000538998 ZNF674Q2M3X9 581 aa8.85□□□□□ -0.99
PBX3-212ENST00000538998 SPINK6Q6UWN8 80 aa8.85□□□□□ -0.99
PBX3-212ENST00000538998 BAGE2Q86Y30 109 aa8.85□□□□□ -0.99
PBX3-212ENST00000538998 C11orf52Q96A22 123 aa8.85□□□□□ -0.99
PBX3-212ENST00000538998 DERL1Q9BUN8 251 aa8.85□□□□□ -0.99
PBX3-212ENST00000538998 TRBV6-1A0A0K0K1D8 114 aa8.84□□□□□ -0.99
PBX3-212ENST00000538998 RPL35P42766 123 aaKnown RBP8.84□□□□□ -0.99
PBX3-212ENST00000538998 IQCJQ1A5X6 159 aa8.84□□□□□ -0.99
PBX3-212ENST00000538998 TMEM250H0YL14 139 aa8.83□□□□□ -1
PBX3-212ENST00000538998 GNG4P50150 75 aa8.83□□□□□ -1
PBX3-212ENST00000538998 COX6A2Q02221 97 aa8.83□□□□□ -1
PBX3-212ENST00000538998 MAJINQ3KP22 176 aa8.83□□□□□ -1
PBX3-212ENST00000538998 IGHV1-24A0A0C4DH33 117 aa8.82□□□□□ -1
PBX3-212ENST00000538998 RAB19A4D1S5 217 aa8.82□□□□□ -1
PBX3-212ENST00000538998 F5H697 171 aa8.82□□□□□ -1
PBX3-212ENST00000538998 NDUFS6O75380 124 aaKnown RBP8.82□□□□□ -1
PBX3-212ENST00000538998 SRP19P09132 144 aaKnown RBP8.82□□□□□ -1
PBX3-212ENST00000538998 CENPWQ5EE01 88 aa8.82□□□□□ -1
PBX3-212ENST00000538998 SMDT1Q9H4I9 107 aa8.82□□□□□ -1
PBX3-212ENST00000538998 IGKV2-24A0A0C4DH68 120 aa8.81□□□□□ -1
PBX3-212ENST00000538998 LTAP01374 205 aa8.81□□□□□ -1
PBX3-212ENST00000538998 STPG4Q8N801 248 aa8.81□□□□□ -1
PBX3-212ENST00000538998 C20orf203Q8NBC4 194 aa8.81□□□□□ -1
PBX3-212ENST00000538998 OR10AG1Q8NH19 301 aa8.81□□□□□ -1
PBX3-212ENST00000538998 A0A1B0GUV1 79 aa8.8□□□□□ -1
PBX3-212ENST00000538998 ZNF727A8MUV8 499 aa8.8□□□□□ -1
PBX3-212ENST00000538998 RPS10P46783 165 aaKnown RBP8.8□□□□□ -1
PBX3-212ENST00000538998 SRSF3P84103 164 aaKnown RBP8.8□□□□□ -1
PBX3-212ENST00000538998 CFAP161Q6P656 301 aa8.8□□□□□ -1
PBX3-212ENST00000538998 SMIM7Q9BQ49 75 aa8.8□□□□□ -1
PBX3-212ENST00000538998 CXCL1P09341 107 aa8.79□□□□□ -1
PBX3-212ENST00000538998 COMMD7Q86VX2 200 aa8.79□□□□□ -1
PBX3-212ENST00000538998 C15orf56Q8N910 161 aa8.79□□□□□ -1
PBX3-212ENST00000538998 PRSS3P2Q8NHM4 247 aa8.79□□□□□ -1
PBX3-212ENST00000538998 BIN3Q9NQY0 253 aa8.79□□□□□ -1
PBX3-212ENST00000538998 IGLV4-60A0A075B6I1 120 aa8.78□□□□□ -1
PBX3-212ENST00000538998 C9JQL5 133 aa8.78□□□□□ -1
PBX3-212ENST00000538998 SMIM17P0DL12 118 aa8.78□□□□□ -1
PBX3-212ENST00000538998 FAM74A3Q4VXF1 159 aa8.78□□□□□ -1
PBX3-212ENST00000538998 SPANXN1Q5VSR9 72 aa8.78□□□□□ -1
PBX3-212ENST00000538998 SMIM12Q96EX1 92 aa8.78□□□□□ -1
PBX3-212ENST00000538998 MUC21A0A0G2JKD1 596 aa8.77□□□□□ -1.01
PBX3-212ENST00000538998 SNAI2O43623 268 aa8.77□□□□□ -1.01
PBX3-212ENST00000538998 SRSF9Q13242 221 aaKnown RBP eCLIP8.77□□□□□ -1.01
PBX3-212ENST00000538998 TMEM241Q24JQ0 296 aa8.77□□□□□ -1.01
PBX3-212ENST00000538998 UQCC3Q6UW78 93 aa8.77□□□□□ -1.01
PBX3-212ENST00000538998 TMEM243Q9BU79 118 aa8.77□□□□□ -1.01
PBX3-212ENST00000538998 SSBP4Q9BWG4 385 aaPredicted RBP8.77□□□□□ -1.01
PBX3-212ENST00000538998 GFRA4Q9GZZ7 299 aa8.77□□□□□ -1.01
PBX3-212ENST00000538998 LINC00474Q9P2X8 69 aa8.77□□□□□ -1.01
PBX3-212ENST00000538998 LINC00862A6NCI5 91 aa8.76□□□□□ -1.01
PBX3-212ENST00000538998 OR5AL1P0C617 328 aa8.76□□□□□ -1.01
PBX3-212ENST00000538998 Q6ZRP5 223 aa8.76□□□□□ -1.01
PBX3-212ENST00000538998 OCC1Q8TAD7 63 aa8.76□□□□□ -1.01
PBX3-212ENST00000538998 AP1S3Q96PC3 154 aa8.76□□□□□ -1.01
PBX3-212ENST00000538998 MLST8Q9BVC4 326 aa8.76□□□□□ -1.01
PBX3-212ENST00000538998 KRTAP9-2Q9BYQ4 174 aa8.76□□□□□ -1.01
PBX3-212ENST00000538998 TRBV20OR9-2A0A075B6H5 130 aa8.75□□□□□ -1.01
PBX3-212ENST00000538998 A0A096LNI7 61 aa8.75□□□□□ -1.01
PBX3-212ENST00000538998 MUC21A0A140T8X8 626 aa8.75□□□□□ -1.01
PBX3-212ENST00000538998 GAGE12HA6NDE8 117 aa8.75□□□□□ -1.01
PBX3-212ENST00000538998 H7C1H1 209 aa8.75□□□□□ -1.01
PBX3-212ENST00000538998 NAT8Q9UHE5 227 aa8.75□□□□□ -1.01
PBX3-212ENST00000538998 PKIGQ9Y2B9 76 aa8.75□□□□□ -1.01
PBX3-212ENST00000538998 ADIRFQ15847 76 aa8.74□□□□□ -1.01
PBX3-212ENST00000538998 HIGD2BQ4VC39 106 aa8.74□□□□□ -1.01
PBX3-212ENST00000538998 FAM231BA6NCW3 169 aa8.73□□□□□ -1.01
PBX3-212ENST00000538998 M0QY20 66 aa8.73□□□□□ -1.01
PBX3-212ENST00000538998 UBE2L6O14933 153 aa8.73□□□□□ -1.01
PBX3-212ENST00000538998 SSTP61278 116 aa8.73□□□□□ -1.01
PBX3-212ENST00000538998 GVQW2A0A096LPI5 108 aaPredicted RBP8.72□□□□□ -1.01
PBX3-212ENST00000538998 F8W036 122 aa8.72□□□□□ -1.01
PBX3-212ENST00000538998 MGPP08493 103 aa8.72□□□□□ -1.01
PBX3-212ENST00000538998 OR2D3Q8NGH3 330 aa8.72□□□□□ -1.01
PBX3-212ENST00000538998 PGLYRP4Q96LB8 373 aa8.72□□□□□ -1.01
PBX3-212ENST00000538998 TMEM218A2RU14 115 aa8.71□□□□□ -1.02
PBX3-212ENST00000538998 XKRY2A2RUG3 117 aa8.71□□□□□ -1.02
PBX3-212ENST00000538998 K7EN84 100 aa8.71□□□□□ -1.02
PBX3-212ENST00000538998 GATCO43716 136 aaKnown RBP8.71□□□□□ -1.02
PBX3-212ENST00000538998 RPS20P60866 119 aaKnown RBP8.71□□□□□ -1.02
PBX3-212ENST00000538998 LINC01551Q86U37 167 aa8.71□□□□□ -1.02
PBX3-212ENST00000538998 NUDT10Q8NFP7 164 aa8.71□□□□□ -1.02
PBX3-212ENST00000538998 NUDT11Q96G61 164 aa8.71□□□□□ -1.02
PBX3-212ENST00000538998 RNASE7Q9H1E1 156 aaKnown RBP8.71□□□□□ -1.02
PBX3-212ENST00000538998 A0A0U1RQV1 116 aa8.7□□□□□ -1.02
PBX3-212ENST00000538998 RPL23P62829 140 aaKnown RBP8.7□□□□□ -1.02
PBX3-212ENST00000538998 SUMO4Q6EEV6 95 aa8.7□□□□□ -1.02
PBX3-212ENST00000538998 IGKV3OR2-268A0A0C4DH90 116 aa8.69□□□□□ -1.02
PBX3-212ENST00000538998 C19orf71A6NCJ1 209 aa8.69□□□□□ -1.02
PBX3-212ENST00000538998 AMTP48728 403 aa8.69□□□□□ -1.02
PBX3-212ENST00000538998 RASL11AQ6T310 242 aa8.69□□□□□ -1.02
PBX3-212ENST00000538998 CHCHD10Q8WYQ3 142 aaPredicted RBP8.69□□□□□ -1.02
PBX3-212ENST00000538998 TPPP3Q9BW30 176 aa8.69□□□□□ -1.02
PBX3-212ENST00000538998 RPP21Q9H633 154 aaKnown RBP8.69□□□□□ -1.02
PBX3-212ENST00000538998 LPAP08519 4548 aa8.68□□□□□ -1.02
PBX3-212ENST00000538998 PNRC1Q12796 327 aaPredicted RBP8.68□□□□□ -1.02
PBX3-212ENST00000538998 COTL1Q14019 142 aa8.68□□□□□ -1.02
PBX3-212ENST00000538998 NDUFA5Q16718 116 aa8.68□□□□□ -1.02
PBX3-212ENST00000538998 FAM231DQ6ZW35 169 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms