RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 HOXD3P31249 432 aaPredicted RBP10.71□□□□□ -0.69
CDCA3-207ENST00000538862 Q6YL49 198 aa10.71□□□□□ -0.69
CDCA3-207ENST00000538862 KLHL30-AS1Q8NEE0 82 aa10.71□□□□□ -0.69
CDCA3-207ENST00000538862 UBE2D1P51668 147 aa10.7□□□□□ -0.7
CDCA3-207ENST00000538862 RPL24P83731 157 aaKnown RBP10.7□□□□□ -0.7
CDCA3-207ENST00000538862 NFE4Q86UQ8 179 aa10.7□□□□□ -0.7
CDCA3-207ENST00000538862 ZNF702PQ9H963 129 aa10.7□□□□□ -0.7
CDCA3-207ENST00000538862 SPANXB1Q9NS25 103 aaPredicted RBP10.7□□□□□ -0.7
CDCA3-207ENST00000538862 A0A0J9YY99 117 aa10.7□□□□□ -0.7
CDCA3-207ENST00000538862 TEX48A0A1B0GUV7 120 aa10.7□□□□□ -0.7
CDCA3-207ENST00000538862 ZNRF2Q8NHG8 242 aa10.7□□□□□ -0.7
CDCA3-207ENST00000538862 EDA2RQ9HAV5 297 aa10.7□□□□□ -0.7
CDCA3-207ENST00000538862 H3BMG7 143 aa10.69□□□□□ -0.7
CDCA3-207ENST00000538862 I3L3M4 83 aa10.69□□□□□ -0.7
CDCA3-207ENST00000538862 EMP1P54849 157 aa10.69□□□□□ -0.7
CDCA3-207ENST00000538862 TMEM170BQ5T4T1 132 aa10.69□□□□□ -0.7
CDCA3-207ENST00000538862 GAGE13Q4V321 117 aa10.68□□□□□ -0.7
CDCA3-207ENST00000538862 C20orf203Q8NBC4 194 aa10.68□□□□□ -0.7
CDCA3-207ENST00000538862 DEFB104AQ8WTQ1 72 aa10.68□□□□□ -0.7
CDCA3-207ENST00000538862 SS18L2Q9UHA2 77 aa10.68□□□□□ -0.7
CDCA3-207ENST00000538862 P0DMU3 169 aa10.68□□□□□ -0.7
CDCA3-207ENST00000538862 FAM231AP0DMU4 169 aa10.68□□□□□ -0.7
CDCA3-207ENST00000538862 FAM231CP0DMU5 169 aa10.68□□□□□ -0.7
CDCA3-207ENST00000538862 GAGE5Q13069 117 aa10.68□□□□□ -0.7
CDCA3-207ENST00000538862 GAGE6Q13070 117 aa10.68□□□□□ -0.7
CDCA3-207ENST00000538862 WFDC2Q14508 124 aa10.68□□□□□ -0.7
CDCA3-207ENST00000538862 SLC25A29Q8N8R3 303 aa10.68□□□□□ -0.7
CDCA3-207ENST00000538862 A8MTW9 85 aa10.67□□□□□ -0.7
CDCA3-207ENST00000538862 RNASE1P07998 156 aaKnown RBP10.67□□□□□ -0.7
CDCA3-207ENST00000538862 ERG28Q9UKR5 140 aa10.67□□□□□ -0.7
CDCA3-207ENST00000538862 PRO0461Q9UI25 63 aa10.66□□□□□ -0.7
CDCA3-207ENST00000538862 TRAV2A0A0B4J234 112 aa10.66□□□□□ -0.7
CDCA3-207ENST00000538862 J3QQQ9 107 aa10.66□□□□□ -0.7
CDCA3-207ENST00000538862 TSPEAR-AS2P59090 65 aa10.66□□□□□ -0.7
CDCA3-207ENST00000538862 AMELXQ99217 191 aa10.66□□□□□ -0.7
CDCA3-207ENST00000538862 TMEM223A0PJW6 202 aa10.65□□□□□ -0.7
CDCA3-207ENST00000538862 LEPROTO15243 131 aa10.65□□□□□ -0.7
CDCA3-207ENST00000538862 IGHV3-30P01768 117 aa10.65□□□□□ -0.7
CDCA3-207ENST00000538862 IGHV3-30-5P0DP03 117 aa10.65□□□□□ -0.7
CDCA3-207ENST00000538862 TSSC4Q9Y5U2 329 aaPredicted RBP10.65□□□□□ -0.7
CDCA3-207ENST00000538862 LGALS3P17931 250 aaKnown RBP10.64□□□□□ -0.71
CDCA3-207ENST00000538862 PIK3CD-AS1Q5SR53 167 aa10.64□□□□□ -0.71
CDCA3-207ENST00000538862 NDUFA11Q86Y39 141 aa10.64□□□□□ -0.71
CDCA3-207ENST00000538862 CITED1Q99966 193 aa10.64□□□□□ -0.71
CDCA3-207ENST00000538862 SPANXA1Q9NS26 97 aa10.64□□□□□ -0.71
CDCA3-207ENST00000538862 RBMY1A1P0DJD3 496 aaKnown RBP10.64□□□□□ -0.71
CDCA3-207ENST00000538862 RBMY1CP0DJD4 496 aa10.64□□□□□ -0.71
CDCA3-207ENST00000538862 RBMY1FQ15415 496 aaKnown RBP10.64□□□□□ -0.71
CDCA3-207ENST00000538862 LYRM7Q5U5X0 104 aa10.64□□□□□ -0.71
CDCA3-207ENST00000538862 Q8N2B8 174 aa10.64□□□□□ -0.71
CDCA3-207ENST00000538862 DLX4Q92988 240 aaPredicted RBP10.64□□□□□ -0.71
CDCA3-207ENST00000538862 SPAG8Q99932 426 aaPredicted RBP10.64□□□□□ -0.71
CDCA3-207ENST00000538862 OPRPNQ99935 248 aaPredicted RBP10.64□□□□□ -0.71
CDCA3-207ENST00000538862 PYGO1Q9Y3Y4 419 aa10.64□□□□□ -0.71
CDCA3-207ENST00000538862 H3BMM0 161 aa10.63□□□□□ -0.71
CDCA3-207ENST00000538862 UBE2D3P61077 147 aa10.63□□□□□ -0.71
CDCA3-207ENST00000538862 UBE2D2P62837 147 aa10.63□□□□□ -0.71
CDCA3-207ENST00000538862 PTH2Q96A98 100 aa10.63□□□□□ -0.71
CDCA3-207ENST00000538862 VCX2Q9H322 139 aa10.63□□□□□ -0.71
CDCA3-207ENST00000538862 IGLV4-3A0A075B6K6 122 aa10.62□□□□□ -0.71
CDCA3-207ENST00000538862 KNCNA6PVL3 124 aa10.62□□□□□ -0.71
CDCA3-207ENST00000538862 DEFB131AP59861 70 aa10.62□□□□□ -0.71
CDCA3-207ENST00000538862 ETDBQ3ZM63 59 aa10.62□□□□□ -0.71
CDCA3-207ENST00000538862 PEMTQ9UBM1 199 aa10.62□□□□□ -0.71
CDCA3-207ENST00000538862 SORL1Q92673 2214 aa10.62□□□□□ -0.71
CDCA3-207ENST00000538862 A8MWV9 139 aa10.62□□□□□ -0.71
CDCA3-207ENST00000538862 RHODO00212 210 aa10.62□□□□□ -0.71
CDCA3-207ENST00000538862 APOMO95445 188 aa10.62□□□□□ -0.71
CDCA3-207ENST00000538862 SLURP1P55000 103 aa10.62□□□□□ -0.71
CDCA3-207ENST00000538862 C3orf56Q8N813 242 aa10.62□□□□□ -0.71
CDCA3-207ENST00000538862 M0R2P5 195 aa10.61□□□□□ -0.71
CDCA3-207ENST00000538862 WIPF1O43516 503 aa10.61□□□□□ -0.71
CDCA3-207ENST00000538862 ZNF22P17026 224 aaPredicted RBP10.61□□□□□ -0.71
CDCA3-207ENST00000538862 SH2D6Q7Z4S9 175 aa10.61□□□□□ -0.71
CDCA3-207ENST00000538862 TMEM86BQ8N661 226 aa10.61□□□□□ -0.71
CDCA3-207ENST00000538862 CFC1BP0CG36 223 aa10.6□□□□□ -0.71
CDCA3-207ENST00000538862 CFC1P0CG37 223 aa10.6□□□□□ -0.71
CDCA3-207ENST00000538862 C5orf47Q569G3 176 aa10.6□□□□□ -0.71
CDCA3-207ENST00000538862 FBN3Q75N90 2809 aa10.6□□□□□ -0.71
CDCA3-207ENST00000538862 TRRAPQ9Y4A5 3859 aa10.6□□□□□ -0.71
CDCA3-207ENST00000538862 CFAP126Q5VTH2 177 aa10.6□□□□□ -0.71
CDCA3-207ENST00000538862 C18orf65Q6ZTR6 163 aa10.6□□□□□ -0.71
CDCA3-207ENST00000538862 C10orf126Q8N4M7 172 aa10.6□□□□□ -0.71
CDCA3-207ENST00000538862 ATP6V0E2Q8NHE4 81 aa10.6□□□□□ -0.71
CDCA3-207ENST00000538862 DUX3Q96PT4 197 aa10.6□□□□□ -0.71
CDCA3-207ENST00000538862 LINC00467Q9BRT7 94 aa10.6□□□□□ -0.71
CDCA3-207ENST00000538862 LOC107984156A0A0G2JMH3 177 aa10.59□□□□□ -0.71
CDCA3-207ENST00000538862 A0A0J9YXV3 536 aa10.59□□□□□ -0.71
CDCA3-207ENST00000538862 ZNF415Q09FC8 603 aa10.59□□□□□ -0.71
CDCA3-207ENST00000538862 DEFB136Q30KP8 78 aa10.59□□□□□ -0.71
CDCA3-207ENST00000538862 ARL17AQ8IVW1 177 aa10.59□□□□□ -0.71
CDCA3-207ENST00000538862 C4orf3Q8WVX3 66 aa10.59□□□□□ -0.71
CDCA3-207ENST00000538862 NBEAL1Q6ZS30 2694 aa10.59□□□□□ -0.71
CDCA3-207ENST00000538862 TRBV20-1A0A075B6N2 111 aa10.58□□□□□ -0.72
CDCA3-207ENST00000538862 RBMY1BA6NDE4 496 aaKnown RBP10.58□□□□□ -0.72
CDCA3-207ENST00000538862 RBMY1EA6NEQ0 496 aaKnown RBP10.58□□□□□ -0.72
CDCA3-207ENST00000538862 RBMY1DP0C7P1 496 aaKnown RBP10.58□□□□□ -0.72
CDCA3-207ENST00000538862 HTN1P15515 57 aa10.58□□□□□ -0.72
CDCA3-207ENST00000538862 A4D1N5 150 aa10.58□□□□□ -0.72
CDCA3-207ENST00000538862 PSMB2P49721 201 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 1384.4 ms