RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 LINC00269Q8N2A0 174 aa9.77□□□□□ -0.85
RAB40B-202ENST00000538809 OSTCQ9NRP0 149 aa9.77□□□□□ -0.85
RAB40B-202ENST00000538809 TRAV26-2A0A0B4J265 109 aa9.76□□□□□ -0.85
RAB40B-202ENST00000538809 C9JQL5 133 aa9.76□□□□□ -0.85
RAB40B-202ENST00000538809 USP17L23D6RBM5 183 aa9.76□□□□□ -0.85
RAB40B-202ENST00000538809 KRTAP26-1Q6PEX3 210 aa9.76□□□□□ -0.85
RAB40B-202ENST00000538809 TEX261Q6UWH6 196 aa9.76□□□□□ -0.85
RAB40B-202ENST00000538809 SCXQ7RTU7 201 aa9.76□□□□□ -0.85
RAB40B-202ENST00000538809 TSKUQ8WUA8 353 aa9.76□□□□□ -0.85
RAB40B-202ENST00000538809 MYCBP2O75592 4640 aa9.76□□□□□ -0.85
RAB40B-202ENST00000538809 DMBT1Q9UGM3 2413 aaPredicted RBP9.75□□□□□ -0.85
RAB40B-202ENST00000538809 C14orf177Q52M58 125 aa9.75□□□□□ -0.85
RAB40B-202ENST00000538809 LINC00528Q8N1L1 170 aa9.75□□□□□ -0.85
RAB40B-202ENST00000538809 C20orf203Q8NBC4 194 aa9.75□□□□□ -0.85
RAB40B-202ENST00000538809 TMEM243Q9BU79 118 aa9.75□□□□□ -0.85
RAB40B-202ENST00000538809 GFRA4Q9GZZ7 299 aa9.75□□□□□ -0.85
RAB40B-202ENST00000538809 IGLV10-54A0A075B6I4 117 aa9.74□□□□□ -0.85
RAB40B-202ENST00000538809 A0A1B0GUV1 79 aa9.74□□□□□ -0.85
RAB40B-202ENST00000538809 FAM231BA6NCW3 169 aa9.74□□□□□ -0.85
RAB40B-202ENST00000538809 ISOC2Q96AB3 205 aa9.74□□□□□ -0.85
RAB40B-202ENST00000538809 RPL39LQ96EH5 51 aaKnown RBP9.74□□□□□ -0.85
RAB40B-202ENST00000538809 V9GYV3 84 aa9.74□□□□□ -0.85
RAB40B-202ENST00000538809 IGLV4-60A0A075B6I1 120 aa9.73□□□□□ -0.85
RAB40B-202ENST00000538809 HIGD1CA8MV81 97 aa9.73□□□□□ -0.85
RAB40B-202ENST00000538809 AMTP48728 403 aa9.73□□□□□ -0.85
RAB40B-202ENST00000538809 RPL23P62829 140 aaKnown RBP9.73□□□□□ -0.85
RAB40B-202ENST00000538809 SRSF3P84103 164 aaKnown RBP9.73□□□□□ -0.85
RAB40B-202ENST00000538809 REG3AQ06141 175 aa9.73□□□□□ -0.85
RAB40B-202ENST00000538809 FAM74A3Q4VXF1 159 aa9.73□□□□□ -0.85
RAB40B-202ENST00000538809 SMIM15Q7Z3B0 74 aa9.73□□□□□ -0.85
RAB40B-202ENST00000538809 HERC1Q15751 4861 aa9.73□□□□□ -0.85
RAB40B-202ENST00000538809 A0A1B0GUT8 65 aa9.72□□□□□ -0.85
RAB40B-202ENST00000538809 PRSS1P07477 247 aa9.72□□□□□ -0.85
RAB40B-202ENST00000538809 COTL1Q14019 142 aa9.72□□□□□ -0.85
RAB40B-202ENST00000538809 TRBV6-5A0A0K0K1A5 114 aa9.71□□□□□ -0.86
RAB40B-202ENST00000538809 UBE2L6O14933 153 aa9.71□□□□□ -0.86
RAB40B-202ENST00000538809 GAS8-AS1O95177 125 aa9.71□□□□□ -0.86
RAB40B-202ENST00000538809 TMEM241Q24JQ0 296 aa9.71□□□□□ -0.86
RAB40B-202ENST00000538809 RNF185Q96GF1 192 aa9.71□□□□□ -0.86
RAB40B-202ENST00000538809 CHAC1Q9BUX1 264 aa9.71□□□□□ -0.86
RAB40B-202ENST00000538809 TMEM191AQ9H0A3 160 aa9.71□□□□□ -0.86
RAB40B-202ENST00000538809 SDHAF1A6NFY7 115 aa9.7□□□□□ -0.86
RAB40B-202ENST00000538809 PLA2G1BP04054 148 aaKnown RBP9.7□□□□□ -0.86
RAB40B-202ENST00000538809 NUP35Q8NFH5 326 aa9.7□□□□□ -0.86
RAB40B-202ENST00000538809 SMDT1Q9H4I9 107 aa9.7□□□□□ -0.86
RAB40B-202ENST00000538809 NCR2O95944 276 aa9.69□□□□□ -0.86
RAB40B-202ENST00000538809 CIRBP-AS1Q8TBR5 109 aa9.69□□□□□ -0.86
RAB40B-202ENST00000538809 BORCS7Q96B45 105 aa9.69□□□□□ -0.86
RAB40B-202ENST00000538809 NAT8Q9UHE5 227 aa9.69□□□□□ -0.86
RAB40B-202ENST00000538809 RAB4AP20338 218 aa9.68□□□□□ -0.86
RAB40B-202ENST00000538809 PEA15Q15121 130 aa9.68□□□□□ -0.86
RAB40B-202ENST00000538809 TRAV8-4A0A0B4J246 113 aa9.67□□□□□ -0.86
RAB40B-202ENST00000538809 IGKV3OR2-268A0A0C4DH90 116 aa9.67□□□□□ -0.86
RAB40B-202ENST00000538809 RPS10P46783 165 aaKnown RBP9.67□□□□□ -0.86
RAB40B-202ENST00000538809 ADIRFQ15847 76 aa9.67□□□□□ -0.86
RAB40B-202ENST00000538809 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.66□□□□□ -0.86
RAB40B-202ENST00000538809 SMIM27A0A1W2PRY6 76 aa9.66□□□□□ -0.86
RAB40B-202ENST00000538809 IGKV2-29A2NJV5 120 aaPredicted RBP9.66□□□□□ -0.86
RAB40B-202ENST00000538809 APCSP02743 223 aa9.66□□□□□ -0.86
RAB40B-202ENST00000538809 POLR2KP53803 58 aaKnown RBP9.66□□□□□ -0.86
RAB40B-202ENST00000538809 AMN1Q8IY45 258 aa9.66□□□□□ -0.86
RAB40B-202ENST00000538809 MRAP2Q96G30 205 aa9.66□□□□□ -0.86
RAB40B-202ENST00000538809 NAT8BQ9UHF3 227 aa9.66□□□□□ -0.86
RAB40B-202ENST00000538809 hDV102S1A0JD36 115 aa9.65□□□□□ -0.86
RAB40B-202ENST00000538809 H7C423 109 aa9.65□□□□□ -0.86
RAB40B-202ENST00000538809 I3L3M4 83 aa9.65□□□□□ -0.86
RAB40B-202ENST00000538809 ESDP10768 282 aa9.65□□□□□ -0.86
RAB40B-202ENST00000538809 RIGQ13278 110 aa9.65□□□□□ -0.86
RAB40B-202ENST00000538809 DGAT2L7PQ6IED9 249 aa9.65□□□□□ -0.86
RAB40B-202ENST00000538809 C9orf163Q8N9P6 203 aa9.65□□□□□ -0.86
RAB40B-202ENST00000538809 TSHBP01222 138 aa9.64□□□□□ -0.87
RAB40B-202ENST00000538809 AMMECR1LQ6DCA0 310 aa9.64□□□□□ -0.87
RAB40B-202ENST00000538809 RNASEKQ6P5S7 137 aaKnown RBP9.64□□□□□ -0.87
RAB40B-202ENST00000538809 ST20Q9HBF5 79 aa9.64□□□□□ -0.87
RAB40B-202ENST00000538809 PKHD1L1Q86WI1 4243 aa9.64□□□□□ -0.87
RAB40B-202ENST00000538809 TRBV27A0A0K0K1C4 114 aa9.63□□□□□ -0.87
RAB40B-202ENST00000538809 GAGE12HA6NDE8 117 aa9.63□□□□□ -0.87
RAB40B-202ENST00000538809 PANO1I0J062 215 aa9.63□□□□□ -0.87
RAB40B-202ENST00000538809 FGF6P10767 208 aa9.63□□□□□ -0.87
RAB40B-202ENST00000538809 PMCHP20382 165 aa9.63□□□□□ -0.87
RAB40B-202ENST00000538809 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
RAB40B-202ENST00000538809 NRACQ8N912 160 aa9.63□□□□□ -0.87
RAB40B-202ENST00000538809 CLRN3Q8NCR9 226 aa9.63□□□□□ -0.87
RAB40B-202ENST00000538809 TMEM242Q9NWH2 141 aa9.63□□□□□ -0.87
RAB40B-202ENST00000538809 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.63□□□□□ -0.87
RAB40B-202ENST00000538809 SMKR1H3BMG3 65 aa9.62□□□□□ -0.87
RAB40B-202ENST00000538809 FAM104BQ5XKR9 115 aa9.62□□□□□ -0.87
RAB40B-202ENST00000538809 J3QL48 77 aa9.61□□□□□ -0.87
RAB40B-202ENST00000538809 ZNF25P17030 456 aaPredicted RBP9.61□□□□□ -0.87
RAB40B-202ENST00000538809 C15orf56Q8N910 161 aa9.61□□□□□ -0.87
RAB40B-202ENST00000538809 SLPIP03973 132 aa9.6□□□□□ -0.87
RAB40B-202ENST00000538809 CNBPP62633 177 aaKnown RBP9.6□□□□□ -0.87
RAB40B-202ENST00000538809 MRPL51Q4U2R6 128 aaKnown RBP9.6□□□□□ -0.87
RAB40B-202ENST00000538809 SDIM1Q6ZPB5 146 aa9.6□□□□□ -0.87
RAB40B-202ENST00000538809 CHCHD10Q8WYQ3 142 aaPredicted RBP9.6□□□□□ -0.87
RAB40B-202ENST00000538809 AP5S1Q9NUS5 200 aa9.6□□□□□ -0.87
RAB40B-202ENST00000538809 A0A1B0GW15 77 aa9.59□□□□□ -0.87
RAB40B-202ENST00000538809 A0A1B0GXF2 115 aa9.59□□□□□ -0.87
RAB40B-202ENST00000538809 HIGD2BQ4VC39 106 aa9.59□□□□□ -0.87
RAB40B-202ENST00000538809 MRPL52Q86TS9 123 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms