RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 TMEM238C9JI98 176 aa8.74□□□□□ -1.01
CPNE8-203ENST00000538596 H3BMM0 161 aa8.74□□□□□ -1.01
CPNE8-203ENST00000538596 EIF4EBP3O60516 100 aaPredicted RBP8.74□□□□□ -1.01
CPNE8-203ENST00000538596 AZU1P20160 251 aa8.74□□□□□ -1.01
CPNE8-203ENST00000538596 CFAP126Q5VTH2 177 aa8.74□□□□□ -1.01
CPNE8-203ENST00000538596 SPXQ9BT56 116 aa8.74□□□□□ -1.01
CPNE8-203ENST00000538596 GAGE12HA6NDE8 117 aa8.74□□□□□ -1.01
CPNE8-203ENST00000538596 UBE2D3P61077 147 aa8.74□□□□□ -1.01
CPNE8-203ENST00000538596 UBE2D2P62837 147 aa8.74□□□□□ -1.01
CPNE8-203ENST00000538596 TRAV2A0A0B4J234 112 aa8.73□□□□□ -1.01
CPNE8-203ENST00000538596 TCL1BO95988 128 aa8.73□□□□□ -1.01
CPNE8-203ENST00000538596 FSHBP01225 129 aa8.73□□□□□ -1.01
CPNE8-203ENST00000538596 CD28P10747 220 aa8.73□□□□□ -1.01
CPNE8-203ENST00000538596 SMAGPQ0VAQ4 97 aa8.73□□□□□ -1.01
CPNE8-203ENST00000538596 RAX2Q96IS3 184 aa8.73□□□□□ -1.01
CPNE8-203ENST00000538596 JMJD1CQ15652 2540 aa8.73□□□□□ -1.01
CPNE8-203ENST00000538596 A4D1N5 150 aa8.73□□□□□ -1.01
CPNE8-203ENST00000538596 LEPROTO15243 131 aa8.73□□□□□ -1.01
CPNE8-203ENST00000538596 ITPR3Q14573 2671 aa8.73□□□□□ -1.01
CPNE8-203ENST00000538596 TRAV8-3A0A0A6YYJ7 113 aa8.72□□□□□ -1.01
CPNE8-203ENST00000538596 IGHV3-38A0A0C4DH36 116 aa8.72□□□□□ -1.01
CPNE8-203ENST00000538596 H7C2G1 150 aa8.72□□□□□ -1.01
CPNE8-203ENST00000538596 C10orf126Q8N4M7 172 aa8.72□□□□□ -1.01
CPNE8-203ENST00000538596 C2CD3Q4AC94 2353 aa8.72□□□□□ -1.01
CPNE8-203ENST00000538596 A8MZ25 164 aa8.71□□□□□ -1.01
CPNE8-203ENST00000538596 RNF152Q8N8N0 203 aa8.71□□□□□ -1.01
CPNE8-203ENST00000538596 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.71□□□□□ -1.02
CPNE8-203ENST00000538596 IGKV2-29A2NJV5 120 aaPredicted RBP8.71□□□□□ -1.02
CPNE8-203ENST00000538596 MUSTN1Q8IVN3 82 aa8.71□□□□□ -1.02
CPNE8-203ENST00000538596 TNFRSF18Q9Y5U5 241 aa8.71□□□□□ -1.02
CPNE8-203ENST00000538596 J3QR89 54 aa8.71□□□□□ -1.02
CPNE8-203ENST00000538596 SIGMAR1Q99720 223 aa8.71□□□□□ -1.02
CPNE8-203ENST00000538596 PRO1854Q9UHT4 67 aa8.71□□□□□ -1.02
CPNE8-203ENST00000538596 ITPR2Q14571 2701 aa8.7□□□□□ -1.02
CPNE8-203ENST00000538596 IGHV3-30-3P0DP02 117 aa8.7□□□□□ -1.02
CPNE8-203ENST00000538596 GCN1Q92616 2671 aaKnown RBP8.7□□□□□ -1.02
CPNE8-203ENST00000538596 M0R2P5 195 aa8.7□□□□□ -1.02
CPNE8-203ENST00000538596 SCGB1C2P0DMR2 95 aa8.7□□□□□ -1.02
CPNE8-203ENST00000538596 FOXI1Q12951 378 aa8.7□□□□□ -1.02
CPNE8-203ENST00000538596 C11orf44Q8N8P7 122 aa8.7□□□□□ -1.02
CPNE8-203ENST00000538596 LINC01587Q99440 93 aa8.7□□□□□ -1.02
CPNE8-203ENST00000538596 MAP6D1Q9H9H5 199 aa8.7□□□□□ -1.02
CPNE8-203ENST00000538596 SETXQ7Z333 2677 aaKnown RBP8.69□□□□□ -1.02
CPNE8-203ENST00000538596 C1QTNF4Q9BXJ3 329 aa8.69□□□□□ -1.02
CPNE8-203ENST00000538596 A0A0J9YXY3 114 aa8.69□□□□□ -1.02
CPNE8-203ENST00000538596 Q5PR19 223 aa8.69□□□□□ -1.02
CPNE8-203ENST00000538596 FLNAP21333 2647 aaKnown RBP8.69□□□□□ -1.02
CPNE8-203ENST00000538596 SPATA25Q9BR10 227 aa8.68□□□□□ -1.02
CPNE8-203ENST00000538596 CHCHD7Q9BUK0 85 aa8.68□□□□□ -1.02
CPNE8-203ENST00000538596 TIMM21Q9BVV7 248 aa8.68□□□□□ -1.02
CPNE8-203ENST00000538596 C11orf72Q8NBR9 251 aa8.68□□□□□ -1.02
CPNE8-203ENST00000538596 DYNLRB2Q8TF09 96 aa8.68□□□□□ -1.02
CPNE8-203ENST00000538596 LINC00467Q9BRT7 94 aa8.68□□□□□ -1.02
CPNE8-203ENST00000538596 IGHV3OR16-12A0A075B7B8 117 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 A8MTW9 85 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 A8MWV9 139 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 MRPS36P82909 103 aaKnown RBP8.67□□□□□ -1.02
CPNE8-203ENST00000538596 FHL3Q13643 280 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 TMEM263Q8WUH6 116 aaKnown RBP8.67□□□□□ -1.02
CPNE8-203ENST00000538596 XCL2Q9UBD3 114 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 PYGO1Q9Y3Y4 419 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 IGHV3-33P01772 117 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 SPINK8P0C7L1 97 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 NPC2P61916 151 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 ZNF415Q09FC8 603 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 ADAMTSL4-AS1Q5T5F5 129 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 Q6ZUT4 128 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 CARD19Q96LW7 228 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 Q96MF0 132 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 DEFB114Q30KQ6 69 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 PEMTQ9UBM1 199 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 UBE2D4Q9Y2X8 147 aa8.67□□□□□ -1.02
CPNE8-203ENST00000538596 A0A1W2PRX2 142 aa8.66□□□□□ -1.02
CPNE8-203ENST00000538596 C4orf3Q8WVX3 66 aa8.66□□□□□ -1.02
CPNE8-203ENST00000538596 EDA2RQ9HAV5 297 aa8.66□□□□□ -1.02
CPNE8-203ENST00000538596 ACANP16112 2415 aa8.66□□□□□ -1.02
CPNE8-203ENST00000538596 PRSS2P07478 247 aa8.66□□□□□ -1.02
CPNE8-203ENST00000538596 LITAFQ99732 161 aa8.66□□□□□ -1.02
CPNE8-203ENST00000538596 MTORP42345 2549 aa8.65□□□□□ -1.02
CPNE8-203ENST00000538596 Q8N2B8 174 aa8.65□□□□□ -1.02
CPNE8-203ENST00000538596 DEFB113Q30KQ7 82 aa8.65□□□□□ -1.03
CPNE8-203ENST00000538596 LYRM7Q5U5X0 104 aa8.65□□□□□ -1.03
CPNE8-203ENST00000538596 Q6ZSV7 163 aa8.65□□□□□ -1.03
CPNE8-203ENST00000538596 ERG28Q9UKR5 140 aa8.65□□□□□ -1.03
CPNE8-203ENST00000538596 Q1RN00 199 aa8.64□□□□□ -1.03
CPNE8-203ENST00000538596 TRBV20-1A0A075B6N2 111 aa8.64□□□□□ -1.03
CPNE8-203ENST00000538596 IGHV1-58A0A0C4DH39 117 aa8.64□□□□□ -1.03
CPNE8-203ENST00000538596 CDIP1Q9H305 208 aa8.64□□□□□ -1.03
CPNE8-203ENST00000538596 NDUFA12Q9UI09 145 aa8.64□□□□□ -1.03
CPNE8-203ENST00000538596 HECTD1Q9ULT8 2610 aa8.64□□□□□ -1.03
CPNE8-203ENST00000538596 IGHV3-53P01767 116 aa8.63□□□□□ -1.03
CPNE8-203ENST00000538596 ODF3L2Q3SX64 289 aa8.63□□□□□ -1.03
CPNE8-203ENST00000538596 TEN1Q86WV5 123 aa8.63□□□□□ -1.03
CPNE8-203ENST00000538596 ANKRD29Q8N6D5 301 aa8.63□□□□□ -1.03
CPNE8-203ENST00000538596 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.63□□□□□ -1.03
CPNE8-203ENST00000538596 ATP6V0E2Q8NHE4 81 aa8.63□□□□□ -1.03
CPNE8-203ENST00000538596 C9JAW5 83 aa8.63□□□□□ -1.03
CPNE8-203ENST00000538596 INSP01308 110 aa8.63□□□□□ -1.03
CPNE8-203ENST00000538596 DAND5Q8N907 189 aa8.63□□□□□ -1.03
CPNE8-203ENST00000538596 VSIG2Q96IQ7 327 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms