RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 HIST1H2BLQ99880 126 aa8.88□□□□□ -0.99
CHFR-216ENST00000538235 GTSF1LQ9H1H1 148 aa8.88□□□□□ -0.99
CHFR-216ENST00000538235 NAT8BQ9UHF3 227 aa8.88□□□□□ -0.99
CHFR-216ENST00000538235 TNFRSF18Q9Y5U5 241 aa8.88□□□□□ -0.99
CHFR-216ENST00000538235 TRBV7-3A0A075B6L6 115 aa8.87□□□□□ -0.99
CHFR-216ENST00000538235 TGIF2-C20orf24A0A0A6YYL0 155 aa8.87□□□□□ -0.99
CHFR-216ENST00000538235 SMKR1H3BMG3 65 aa8.87□□□□□ -0.99
CHFR-216ENST00000538235 TCAPO15273 167 aa8.87□□□□□ -0.99
CHFR-216ENST00000538235 MRPL54Q6P161 138 aaKnown RBP8.87□□□□□ -0.99
CHFR-216ENST00000538235 SIVA1O15304 175 aa8.86□□□□□ -0.99
CHFR-216ENST00000538235 NCR2O95944 276 aa8.86□□□□□ -0.99
CHFR-216ENST00000538235 SMIM17P0DL12 118 aa8.86□□□□□ -0.99
CHFR-216ENST00000538235 LELP1Q5T871 98 aa8.86□□□□□ -0.99
CHFR-216ENST00000538235 FRZBQ92765 325 aa8.86□□□□□ -0.99
CHFR-216ENST00000538235 TMEM191AQ9H0A3 160 aa8.86□□□□□ -0.99
CHFR-216ENST00000538235 DYNC1H1Q14204 4646 aaKnown RBP8.86□□□□□ -0.99
CHFR-216ENST00000538235 IFITM10A6NMD0 228 aa8.85□□□□□ -0.99
CHFR-216ENST00000538235 DNAH10OSP0CZ25 163 aa8.85□□□□□ -0.99
CHFR-216ENST00000538235 RPL36AP83881 106 aaKnown RBP8.85□□□□□ -0.99
CHFR-216ENST00000538235 RASL11AQ6T310 242 aa8.85□□□□□ -0.99
CHFR-216ENST00000538235 Q6ZRN7 208 aaPredicted RBP8.85□□□□□ -0.99
CHFR-216ENST00000538235 RPL36ALQ969Q0 106 aaKnown RBP8.85□□□□□ -0.99
CHFR-216ENST00000538235 DNAJC30Q96LL9 226 aa8.85□□□□□ -0.99
CHFR-216ENST00000538235 PKHD1P08F94 4074 aa8.84□□□□□ -0.99
CHFR-216ENST00000538235 PHOX2AO14813 284 aa8.84□□□□□ -0.99
CHFR-216ENST00000538235 CAMPP49913 170 aa8.84□□□□□ -0.99
CHFR-216ENST00000538235 NRACQ8N912 160 aa8.84□□□□□ -0.99
CHFR-216ENST00000538235 URGCP-MRPS24S4R325 110 aa8.84□□□□□ -0.99
CHFR-216ENST00000538235 DNAH5Q8TE73 4624 aa8.84□□□□□ -1
CHFR-216ENST00000538235 BIRC6Q9NR09 4857 aa8.83□□□□□ -1
CHFR-216ENST00000538235 A0A1B0GV90 55 aa8.83□□□□□ -1
CHFR-216ENST00000538235 LINC00614P0C842 121 aa8.83□□□□□ -1
CHFR-216ENST00000538235 RIGQ13278 110 aa8.83□□□□□ -1
CHFR-216ENST00000538235 MRPL51Q4U2R6 128 aaKnown RBP8.83□□□□□ -1
CHFR-216ENST00000538235 SH2D6Q7Z4S9 175 aa8.83□□□□□ -1
CHFR-216ENST00000538235 IGHV3-30P01768 117 aa8.82□□□□□ -1
CHFR-216ENST00000538235 IGHV3-33P01772 117 aa8.82□□□□□ -1
CHFR-216ENST00000538235 IGHV3-30-3P0DP02 117 aa8.82□□□□□ -1
CHFR-216ENST00000538235 IGHV3-30-5P0DP03 117 aa8.82□□□□□ -1
CHFR-216ENST00000538235 OR10J3Q5JRS4 329 aa8.82□□□□□ -1
CHFR-216ENST00000538235 FAM104BQ5XKR9 115 aa8.82□□□□□ -1
CHFR-216ENST00000538235 TRBV6-8A0A0A6YYG3 113 aa8.81□□□□□ -1
CHFR-216ENST00000538235 A0A1B0GVY2 172 aa8.81□□□□□ -1
CHFR-216ENST00000538235 HBBP68871 147 aa8.81□□□□□ -1
CHFR-216ENST00000538235 LINC01556Q5JQF7 62 aa8.81□□□□□ -1
CHFR-216ENST00000538235 NIT1Q86X76 327 aa8.81□□□□□ -1
CHFR-216ENST00000538235 BORCS7Q96B45 105 aa8.81□□□□□ -1
CHFR-216ENST00000538235 TRBV6-5A0A0K0K1A5 114 aa8.8□□□□□ -1
CHFR-216ENST00000538235 TNP2Q05952 138 aa8.8□□□□□ -1
CHFR-216ENST00000538235 DAZ4Q86SG3 579 aaKnown RBP8.8□□□□□ -1
CHFR-216ENST00000538235 C6orf223Q8N319 242 aa8.8□□□□□ -1
CHFR-216ENST00000538235 DAZ3Q9NR90 486 aaKnown RBP8.8□□□□□ -1
CHFR-216ENST00000538235 H7C1H1 209 aa8.79□□□□□ -1
CHFR-216ENST00000538235 BTF3P20290 206 aaKnown RBP8.79□□□□□ -1
CHFR-216ENST00000538235 MPV17L2Q567V2 206 aa8.79□□□□□ -1
CHFR-216ENST00000538235 ZNF664Q8N3J9 261 aa8.79□□□□□ -1
CHFR-216ENST00000538235 SDHAF1A6NFY7 115 aa8.78□□□□□ -1
CHFR-216ENST00000538235 TSHBP01222 138 aa8.78□□□□□ -1
CHFR-216ENST00000538235 NPYP01303 97 aa8.78□□□□□ -1
CHFR-216ENST00000538235 MT-ND6P03923 174 aa8.78□□□□□ -1
CHFR-216ENST00000538235 POLR2KP53803 58 aaKnown RBP8.78□□□□□ -1
CHFR-216ENST00000538235 C1orf134Q5TEV5 83 aa8.78□□□□□ -1
CHFR-216ENST00000538235 ATP5L2Q7Z4Y8 100 aa8.78□□□□□ -1
CHFR-216ENST00000538235 MRAP2Q96G30 205 aa8.78□□□□□ -1
CHFR-216ENST00000538235 TMEM70Q9BUB7 260 aa8.78□□□□□ -1
CHFR-216ENST00000538235 PRO1933Q9H354 126 aa8.78□□□□□ -1
CHFR-216ENST00000538235 TRAV8-6A0A0B4J262 113 aa8.77□□□□□ -1.01
CHFR-216ENST00000538235 D6R8Y8 96 aa8.77□□□□□ -1.01
CHFR-216ENST00000538235 SCGB1D1O95968 90 aa8.77□□□□□ -1.01
CHFR-216ENST00000538235 ESDP10768 282 aa8.77□□□□□ -1.01
CHFR-216ENST00000538235 PDZD11Q5EBL8 140 aa8.77□□□□□ -1.01
CHFR-216ENST00000538235 TTC32Q5I0X7 151 aa8.77□□□□□ -1.01
CHFR-216ENST00000538235 TMEM136Q6ZRR5 245 aa8.77□□□□□ -1.01
CHFR-216ENST00000538235 SMIM15Q7Z3B0 74 aa8.77□□□□□ -1.01
CHFR-216ENST00000538235 Q8N976 141 aa8.77□□□□□ -1.01
CHFR-216ENST00000538235 CHCHD7Q9BUK0 85 aa8.77□□□□□ -1.01
CHFR-216ENST00000538235 TRAPPC1Q9Y5R8 145 aa8.77□□□□□ -1.01
CHFR-216ENST00000538235 A0A1B0GW15 77 aa8.76□□□□□ -1.01
CHFR-216ENST00000538235 IBA57-AS1B1ANH7 110 aa8.76□□□□□ -1.01
CHFR-216ENST00000538235 GAGE6Q13070 117 aa8.76□□□□□ -1.01
CHFR-216ENST00000538235 MIEN1Q9BRT3 115 aa8.76□□□□□ -1.01
CHFR-216ENST00000538235 PRSS29PA6NIE9 313 aa8.75□□□□□ -1.01
CHFR-216ENST00000538235 IGLV4-60A0A075B6I1 120 aa8.74□□□□□ -1.01
CHFR-216ENST00000538235 IGHV1-24A0A0C4DH33 117 aa8.74□□□□□ -1.01
CHFR-216ENST00000538235 C20orf202A1L168 122 aa8.74□□□□□ -1.01
CHFR-216ENST00000538235 WFDC2Q14508 124 aa8.74□□□□□ -1.01
CHFR-216ENST00000538235 COL5A1-AS1Q5SY13 56 aa8.74□□□□□ -1.01
CHFR-216ENST00000538235 PET117Q6UWS5 81 aa8.74□□□□□ -1.01
CHFR-216ENST00000538235 MAPKAPK5-AS1Q8N8E1 139 aa8.74□□□□□ -1.01
CHFR-216ENST00000538235 C20orf203Q8NBC4 194 aa8.74□□□□□ -1.01
CHFR-216ENST00000538235 CHCHD5Q9BSY4 110 aa8.74□□□□□ -1.01
CHFR-216ENST00000538235 Q9HAA7 133 aa8.74□□□□□ -1.01
CHFR-216ENST00000538235 LRP1BQ9NZR2 4599 aa8.74□□□□□ -1.01
CHFR-216ENST00000538235 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.73□□□□□ -1.01
CHFR-216ENST00000538235 TRBV27A0A0K0K1C4 114 aa8.73□□□□□ -1.01
CHFR-216ENST00000538235 IGKV2-29A2NJV5 120 aaPredicted RBP8.73□□□□□ -1.01
CHFR-216ENST00000538235 DLEU1O43261 78 aa8.73□□□□□ -1.01
CHFR-216ENST00000538235 TNFRSF6BO95407 300 aa8.73□□□□□ -1.01
CHFR-216ENST00000538235 FUSP35637 526 aaKnown RBP eCLIP8.73□□□□□ -1.01
CHFR-216ENST00000538235 SUMO2P61956 95 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms