RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 SMDT1Q9H4I9 107 aa5.13□□□□□ -1.59
MSH6-209ENST00000538136 SERF1AO75920 110 aa5.12□□□□□ -1.59
MSH6-209ENST00000538136 ESRGQ1W209 222 aa5.12□□□□□ -1.59
MSH6-209ENST00000538136 OR13C6PQ8NH95 151 aa5.12□□□□□ -1.59
MSH6-209ENST00000538136 MIEN1Q9BRT3 115 aa5.12□□□□□ -1.59
MSH6-209ENST00000538136 TRAV4A0A0B4J268 109 aa5.12□□□□□ -1.59
MSH6-209ENST00000538136 GAGE10A6NGK3 116 aa5.12□□□□□ -1.59
MSH6-209ENST00000538136 FGF6P10767 208 aa5.12□□□□□ -1.59
MSH6-209ENST00000538136 CKS1BP61024 79 aa5.12□□□□□ -1.59
MSH6-209ENST00000538136 C2orf66Q6UXQ4 117 aa5.12□□□□□ -1.59
MSH6-209ENST00000538136 NIT1Q86X76 327 aa5.12□□□□□ -1.59
MSH6-209ENST00000538136 TRAV2A0A0B4J234 112 aa5.12□□□□□ -1.59
MSH6-209ENST00000538136 IGHV1-24A0A0C4DH33 117 aa5.12□□□□□ -1.59
MSH6-209ENST00000538136 EGFEM1PQ0D2K5 195 aa5.12□□□□□ -1.59
MSH6-209ENST00000538136 LINC01559Q495D7 138 aa5.12□□□□□ -1.59
MSH6-209ENST00000538136 MPV17L2Q567V2 206 aa5.12□□□□□ -1.59
MSH6-209ENST00000538136 I3L3M4 83 aa5.11□□□□□ -1.59
MSH6-209ENST00000538136 ELOBQ15370 118 aa5.11□□□□□ -1.59
MSH6-209ENST00000538136 C15orf53Q8NAA6 179 aa5.11□□□□□ -1.59
MSH6-209ENST00000538136 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.11□□□□□ -1.59
MSH6-209ENST00000538136 TCEAL7Q9BRU2 100 aa5.11□□□□□ -1.59
MSH6-209ENST00000538136 C20orf202A1L168 122 aa5.11□□□□□ -1.59
MSH6-209ENST00000538136 PHOX2AO14813 284 aa5.11□□□□□ -1.59
MSH6-209ENST00000538136 SS18Q15532 418 aa5.11□□□□□ -1.59
MSH6-209ENST00000538136 SFTA2Q6UW10 78 aa5.11□□□□□ -1.59
MSH6-209ENST00000538136 C2orf88Q9BSF0 95 aa5.11□□□□□ -1.59
MSH6-209ENST00000538136 CCL25O15444 150 aa5.1□□□□□ -1.59
MSH6-209ENST00000538136 LINC00614P0C842 121 aa5.1□□□□□ -1.59
MSH6-209ENST00000538136 TEX43Q6ZNM6 134 aa5.1□□□□□ -1.59
MSH6-209ENST00000538136 POM121L12Q8N7R1 296 aa5.1□□□□□ -1.59
MSH6-209ENST00000538136 CRYBA4P53673 196 aa5.1□□□□□ -1.59
MSH6-209ENST00000538136 FHL2Q14192 279 aa5.1□□□□□ -1.59
MSH6-209ENST00000538136 NEXN-AS1Q8NBZ9 246 aa5.1□□□□□ -1.59
MSH6-209ENST00000538136 MLST8Q9BVC4 326 aa5.1□□□□□ -1.59
MSH6-209ENST00000538136 GTSF1LQ9H1H1 148 aa5.1□□□□□ -1.59
MSH6-209ENST00000538136 EDA2RQ9HAV5 297 aa5.1□□□□□ -1.59
MSH6-209ENST00000538136 PAM16Q9Y3D7 125 aa5.1□□□□□ -1.59
MSH6-209ENST00000538136 TEX48A0A1B0GUV7 120 aa5.1□□□□□ -1.59
MSH6-209ENST00000538136 RPL18AQ02543 176 aaKnown RBP5.1□□□□□ -1.59
MSH6-209ENST00000538136 LINC00158P58513 81 aa5.09□□□□□ -1.59
MSH6-209ENST00000538136 LAGE3Q14657 143 aa5.09□□□□□ -1.59
MSH6-209ENST00000538136 LINC00467Q9BRT7 94 aa5.09□□□□□ -1.59
MSH6-209ENST00000538136 MAP1LC3CQ9BXW4 147 aa5.09□□□□□ -1.59
MSH6-209ENST00000538136 A0A0J9YXV3 536 aa5.09□□□□□ -1.6
MSH6-209ENST00000538136 RBX1P62877 108 aa5.09□□□□□ -1.6
MSH6-209ENST00000538136 GAGE12HA6NDE8 117 aa5.08□□□□□ -1.6
MSH6-209ENST00000538136 SPINK8P0C7L1 97 aa5.08□□□□□ -1.6
MSH6-209ENST00000538136 FAM231DQ6ZW35 169 aa5.08□□□□□ -1.6
MSH6-209ENST00000538136 SMIM2Q9BVW6 85 aa5.08□□□□□ -1.6
MSH6-209ENST00000538136 A0A1B0GV72 72 aa5.08□□□□□ -1.6
MSH6-209ENST00000538136 MT-ND6P03923 174 aa5.08□□□□□ -1.6
MSH6-209ENST00000538136 DNAH10OSP0CZ25 163 aa5.08□□□□□ -1.6
MSH6-209ENST00000538136 SRSF9Q13242 221 aaKnown RBP eCLIP5.08□□□□□ -1.6
MSH6-209ENST00000538136 LINC00518Q8N0U6 118 aa5.08□□□□□ -1.6
MSH6-209ENST00000538136 TM2D3Q9BRN9 247 aa5.08□□□□□ -1.6
MSH6-209ENST00000538136 TRBV6-1A0A0K0K1D8 114 aa5.08□□□□□ -1.6
MSH6-209ENST00000538136 C19orf71A6NCJ1 209 aa5.08□□□□□ -1.6
MSH6-209ENST00000538136 REG3AQ06141 175 aa5.08□□□□□ -1.6
MSH6-209ENST00000538136 CASC10Q5T4H9 136 aa5.08□□□□□ -1.6
MSH6-209ENST00000538136 C1orf134Q5TEV5 83 aa5.08□□□□□ -1.6
MSH6-209ENST00000538136 Q1RN00 199 aa5.07□□□□□ -1.6
MSH6-209ENST00000538136 C20orf144Q9BQM9 153 aa5.07□□□□□ -1.6
MSH6-209ENST00000538136 ALKBH7Q9BT30 221 aaPredicted RBP5.07□□□□□ -1.6
MSH6-209ENST00000538136 LINC00694P0DN24 101 aa5.07□□□□□ -1.6
MSH6-209ENST00000538136 FOXI1Q12951 378 aa5.07□□□□□ -1.6
MSH6-209ENST00000538136 Q6ZUT4 128 aa5.07□□□□□ -1.6
MSH6-209ENST00000538136 RASL10AQ92737 203 aa5.07□□□□□ -1.6
MSH6-209ENST00000538136 C12orf57Q99622 126 aa5.07□□□□□ -1.6
MSH6-209ENST00000538136 S100A12P80511 92 aa5.07□□□□□ -1.6
MSH6-209ENST00000538136 LGALS9BQ3B8N2 356 aa5.07□□□□□ -1.6
MSH6-209ENST00000538136 CAMK2N2Q96S95 79 aa5.07□□□□□ -1.6
MSH6-209ENST00000538136 PRO1933Q9H354 126 aa5.07□□□□□ -1.6
MSH6-209ENST00000538136 TRBV6-8A0A0A6YYG3 113 aa5.07□□□□□ -1.6
MSH6-209ENST00000538136 PPBPP02775 128 aa5.07□□□□□ -1.6
MSH6-209ENST00000538136 LYPD5Q6UWN5 251 aa5.07□□□□□ -1.6
MSH6-209ENST00000538136 C11orf72Q8NBR9 251 aa5.07□□□□□ -1.6
MSH6-209ENST00000538136 IGLV4-60A0A075B6I1 120 aa5.06□□□□□ -1.6
MSH6-209ENST00000538136 A8MZ25 164 aa5.06□□□□□ -1.6
MSH6-209ENST00000538136 M0QY20 66 aa5.06□□□□□ -1.6
MSH6-209ENST00000538136 SMR3BP02814 79 aaPredicted RBP5.06□□□□□ -1.6
MSH6-209ENST00000538136 LINC00173Q6ZV60 143 aa5.06□□□□□ -1.6
MSH6-209ENST00000538136 CSNK1G2-AS1Q8NCQ2 148 aa5.06□□□□□ -1.6
MSH6-209ENST00000538136 NXT2Q9NPJ8 142 aaKnown RBP5.06□□□□□ -1.6
MSH6-209ENST00000538136 LINC00588Q9Y4M8 146 aa5.06□□□□□ -1.6
MSH6-209ENST00000538136 CTAG1AP78358 180 aa5.06□□□□□ -1.6
MSH6-209ENST00000538136 IFI27L1Q96BM0 104 aa5.06□□□□□ -1.6
MSH6-209ENST00000538136 RS1O15537 224 aa5.06□□□□□ -1.6
MSH6-209ENST00000538136 HBDP02042 147 aa5.06□□□□□ -1.6
MSH6-209ENST00000538136 PTTG1IPP53801 180 aa5.06□□□□□ -1.6
MSH6-209ENST00000538136 ORMDL2Q53FV1 153 aa5.06□□□□□ -1.6
MSH6-209ENST00000538136 STPG4Q8N801 248 aa5.06□□□□□ -1.6
MSH6-209ENST00000538136 XAGE1AQ9HD64 81 aa5.06□□□□□ -1.6
MSH6-209ENST00000538136 CARHSP1Q9Y2V2 147 aaKnown RBP5.06□□□□□ -1.6
MSH6-209ENST00000538136 GCSHP23434 173 aa5.05□□□□□ -1.6
MSH6-209ENST00000538136 UBE2BP63146 152 aa5.05□□□□□ -1.6
MSH6-209ENST00000538136 ORAOV1Q8WV07 137 aa5.05□□□□□ -1.6
MSH6-209ENST00000538136 SMIM27A0A1W2PRY6 76 aa5.05□□□□□ -1.6
MSH6-209ENST00000538136 LGALS3P17931 250 aaKnown RBP5.05□□□□□ -1.6
MSH6-209ENST00000538136 ZFP2Q6ZN57 461 aa5.05□□□□□ -1.6
MSH6-209ENST00000538136 DAND5Q8N907 189 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms