RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 DPH3P1Q9H4G8 78 aa7.9□□□□□ -1.15
CLIP1-210ENST00000538120 H3BMM0 161 aa7.89□□□□□ -1.15
CLIP1-210ENST00000538120 CCL24O00175 119 aa7.89□□□□□ -1.15
CLIP1-210ENST00000538120 RBMY1A1P0DJD3 496 aaKnown RBP7.89□□□□□ -1.15
CLIP1-210ENST00000538120 RBMY1CP0DJD4 496 aa7.89□□□□□ -1.15
CLIP1-210ENST00000538120 RBMY1FQ15415 496 aaKnown RBP7.89□□□□□ -1.15
CLIP1-210ENST00000538120 CD300EQ496F6 205 aaPredicted RBP7.89□□□□□ -1.15
CLIP1-210ENST00000538120 GAGE13Q4V321 117 aa7.89□□□□□ -1.15
CLIP1-210ENST00000538120 NEXN-AS1Q8NBZ9 246 aa7.89□□□□□ -1.15
CLIP1-210ENST00000538120 C9orf85Q96MD7 179 aa7.89□□□□□ -1.15
CLIP1-210ENST00000538120 MDFICQ9P1T7 246 aa7.89□□□□□ -1.15
CLIP1-210ENST00000538120 F5H768 121 aa7.89□□□□□ -1.15
CLIP1-210ENST00000538120 SUMO2P61956 95 aaKnown RBP7.89□□□□□ -1.15
CLIP1-210ENST00000538120 DYNLRB2Q8TF09 96 aa7.89□□□□□ -1.15
CLIP1-210ENST00000538120 PLEKHB2Q96CS7 222 aa7.89□□□□□ -1.15
CLIP1-210ENST00000538120 ERG28Q9UKR5 140 aa7.89□□□□□ -1.15
CLIP1-210ENST00000538120 IGHV1OR15-1A0A075B7D0 117 aa7.88□□□□□ -1.15
CLIP1-210ENST00000538120 TRAV12-1A0A0B4J245 112 aa7.88□□□□□ -1.15
CLIP1-210ENST00000538120 LY6G6DO95868 133 aa7.88□□□□□ -1.15
CLIP1-210ENST00000538120 Q8N1Y9 231 aa7.88□□□□□ -1.15
CLIP1-210ENST00000538120 BAALCQ8WXS3 180 aa7.88□□□□□ -1.15
CLIP1-210ENST00000538120 TOMM6Q96B49 74 aa7.88□□□□□ -1.15
CLIP1-210ENST00000538120 JPT2Q9H910 190 aa7.88□□□□□ -1.15
CLIP1-210ENST00000538120 MAP6D1Q9H9H5 199 aa7.88□□□□□ -1.15
CLIP1-210ENST00000538120 ZNF256Q9Y2P7 627 aaPredicted RBP7.88□□□□□ -1.15
CLIP1-210ENST00000538120 MUC4Q99102 2169 aa7.88□□□□□ -1.15
CLIP1-210ENST00000538120 EMP1P54849 157 aa7.88□□□□□ -1.15
CLIP1-210ENST00000538120 ZNF418Q8TF45 676 aaPredicted RBP7.88□□□□□ -1.15
CLIP1-210ENST00000538120 PRADC1Q9BSG0 188 aa7.88□□□□□ -1.15
CLIP1-210ENST00000538120 PPDPFQ9H3Y8 114 aa7.88□□□□□ -1.15
CLIP1-210ENST00000538120 HECTD1Q9ULT8 2610 aa7.87□□□□□ -1.15
CLIP1-210ENST00000538120 A0A1B0GWB2 263 aa7.87□□□□□ -1.15
CLIP1-210ENST00000538120 MGPP08493 103 aa7.87□□□□□ -1.15
CLIP1-210ENST00000538120 C2orf66Q6UXQ4 117 aa7.87□□□□□ -1.15
CLIP1-210ENST00000538120 MRPL16Q9NX20 251 aaKnown RBP7.87□□□□□ -1.15
CLIP1-210ENST00000538120 KIR2DL5BQ8NHK3 375 aa7.87□□□□□ -1.15
CLIP1-210ENST00000538120 LINC01620Q4KN68 170 aa7.86□□□□□ -1.15
CLIP1-210ENST00000538120 ORMDL2Q53FV1 153 aa7.86□□□□□ -1.15
CLIP1-210ENST00000538120 SPATA25Q9BR10 227 aa7.86□□□□□ -1.15
CLIP1-210ENST00000538120 C20orf78Q9BR46 151 aa7.86□□□□□ -1.15
CLIP1-210ENST00000538120 SORL1Q92673 2214 aa7.86□□□□□ -1.15
CLIP1-210ENST00000538120 LINC01549A6NIU2 74 aa7.86□□□□□ -1.15
CLIP1-210ENST00000538120 ZNF815PA8K554 130 aa7.86□□□□□ -1.15
CLIP1-210ENST00000538120 NDUFA7O95182 113 aa7.86□□□□□ -1.15
CLIP1-210ENST00000538120 CRYGDP07320 174 aa7.85□□□□□ -1.15
CLIP1-210ENST00000538120 PROK1P58294 105 aa7.85□□□□□ -1.15
CLIP1-210ENST00000538120 SERTAD4-AS1Q5TG53 156 aa7.85□□□□□ -1.15
CLIP1-210ENST00000538120 ZFP2Q6ZN57 461 aa7.85□□□□□ -1.15
CLIP1-210ENST00000538120 MTORP42345 2549 aa7.85□□□□□ -1.15
CLIP1-210ENST00000538120 J3QR89 54 aa7.85□□□□□ -1.15
CLIP1-210ENST00000538120 ODF3L2Q3SX64 289 aa7.85□□□□□ -1.15
CLIP1-210ENST00000538120 SCGB1D4Q6XE38 83 aa7.85□□□□□ -1.15
CLIP1-210ENST00000538120 V9GYY9 64 aa7.85□□□□□ -1.15
CLIP1-210ENST00000538120 TSHBP01222 138 aa7.84□□□□□ -1.15
CLIP1-210ENST00000538120 OTOGQ6ZRI0 2925 aa7.84□□□□□ -1.15
CLIP1-210ENST00000538120 APOMO95445 188 aa7.84□□□□□ -1.16
CLIP1-210ENST00000538120 PRM2P04554 102 aa7.84□□□□□ -1.16
CLIP1-210ENST00000538120 KRTAP10-3P60369 221 aa7.84□□□□□ -1.16
CLIP1-210ENST00000538120 SRSF9Q13242 221 aaKnown RBP eCLIP7.84□□□□□ -1.16
CLIP1-210ENST00000538120 SUMO4Q6EEV6 95 aa7.84□□□□□ -1.16
CLIP1-210ENST00000538120 NFE4Q86UQ8 179 aa7.84□□□□□ -1.16
CLIP1-210ENST00000538120 LOC107984156A0A0G2JMH3 177 aa7.83□□□□□ -1.16
CLIP1-210ENST00000538120 C11orf86A6NJI1 115 aa7.83□□□□□ -1.16
CLIP1-210ENST00000538120 USP17L23D6RBM5 183 aa7.83□□□□□ -1.16
CLIP1-210ENST00000538120 ARL17AQ8IVW1 177 aa7.83□□□□□ -1.16
CLIP1-210ENST00000538120 TRGV11A0A075B6L2 103 aa7.83□□□□□ -1.16
CLIP1-210ENST00000538120 PSMB2P49721 201 aa7.83□□□□□ -1.16
CLIP1-210ENST00000538120 RPL39P62891 51 aaKnown RBP7.83□□□□□ -1.16
CLIP1-210ENST00000538120 CFAP126Q5VTH2 177 aa7.83□□□□□ -1.16
CLIP1-210ENST00000538120 IGLV4-69A0A075B6H9 119 aa7.82□□□□□ -1.16
CLIP1-210ENST00000538120 UBE2D1P51668 147 aa7.82□□□□□ -1.16
CLIP1-210ENST00000538120 SYT8Q8NBV8 401 aa7.82□□□□□ -1.16
CLIP1-210ENST00000538120 TSPEAR-AS2P59090 65 aa7.81□□□□□ -1.16
CLIP1-210ENST00000538120 FOXI1Q12951 378 aa7.81□□□□□ -1.16
CLIP1-210ENST00000538120 TP53TG1Q9Y2A0 90 aa7.81□□□□□ -1.16
CLIP1-210ENST00000538120 B5MCH6 92 aa7.8□□□□□ -1.16
CLIP1-210ENST00000538120 INAFM1C9JVW0 142 aa7.8□□□□□ -1.16
CLIP1-210ENST00000538120 PPP1R17O96001 155 aa7.8□□□□□ -1.16
CLIP1-210ENST00000538120 VPREB1P12018 145 aa7.8□□□□□ -1.16
CLIP1-210ENST00000538120 HTN1P15515 57 aa7.8□□□□□ -1.16
CLIP1-210ENST00000538120 POLR2KP53803 58 aaKnown RBP7.8□□□□□ -1.16
CLIP1-210ENST00000538120 NSUN5P1Q3KNT7 163 aa7.8□□□□□ -1.16
CLIP1-210ENST00000538120 ZNF876PQ49A33 203 aa7.8□□□□□ -1.16
CLIP1-210ENST00000538120 RNF183Q96D59 192 aa7.8□□□□□ -1.16
CLIP1-210ENST00000538120 HIVEP2P31629 2446 aa7.8□□□□□ -1.16
CLIP1-210ENST00000538120 A0A0J9YY99 117 aa7.8□□□□□ -1.16
CLIP1-210ENST00000538120 FAM74A4Q5TZK3 123 aa7.8□□□□□ -1.16
CLIP1-210ENST00000538120 LINC00467Q9BRT7 94 aa7.8□□□□□ -1.16
CLIP1-210ENST00000538120 C1QTNF4Q9BXJ3 329 aa7.8□□□□□ -1.16
CLIP1-210ENST00000538120 IGIPA6NJ69 53 aa7.79□□□□□ -1.16
CLIP1-210ENST00000538120 F5H697 171 aa7.79□□□□□ -1.16
CLIP1-210ENST00000538120 M0QY20 66 aa7.79□□□□□ -1.16
CLIP1-210ENST00000538120 TRBV6-5A0A0K0K1A5 114 aa7.79□□□□□ -1.16
CLIP1-210ENST00000538120 TRPT1Q86TN4 253 aaKnown RBP7.79□□□□□ -1.16
CLIP1-210ENST00000538120 NDUFA11Q86Y39 141 aa7.79□□□□□ -1.16
CLIP1-210ENST00000538120 ZNRF2Q8NHG8 242 aa7.79□□□□□ -1.16
CLIP1-210ENST00000538120 DNAJC30Q96LL9 226 aa7.79□□□□□ -1.16
CLIP1-210ENST00000538120 TCL1BO95988 128 aa7.78□□□□□ -1.16
CLIP1-210ENST00000538120 IGLV1-51P01701 117 aa7.78□□□□□ -1.16
CLIP1-210ENST00000538120 UBE2D3P61077 147 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms