RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 SMIM12Q96EX1 92 aa5.39□□□□□ -1.55
USP28-203ENST00000537490 DPH3P1Q9H4G8 78 aa5.39□□□□□ -1.55
USP28-203ENST00000537490 NIT2Q9NQR4 276 aa5.39□□□□□ -1.55
USP28-203ENST00000537490 MED9Q9NWA0 146 aa5.39□□□□□ -1.55
USP28-203ENST00000537490 PLA2G2DQ9UNK4 145 aa5.39□□□□□ -1.55
USP28-203ENST00000537490 FAT3Q8TDW7 4589 aa5.38□□□□□ -1.55
USP28-203ENST00000537490 XKRY2A2RUG3 117 aa5.38□□□□□ -1.55
USP28-203ENST00000537490 IFNA1P01562 189 aa5.38□□□□□ -1.55
USP28-203ENST00000537490 TRGC1P0CF51 173 aa5.38□□□□□ -1.55
USP28-203ENST00000537490 CHTF8P0CG12 524 aa5.38□□□□□ -1.55
USP28-203ENST00000537490 MT1HL1P0DM35 61 aa5.38□□□□□ -1.55
USP28-203ENST00000537490 SULT1A2P50226 295 aa5.38□□□□□ -1.55
USP28-203ENST00000537490 MEF2BQ02080 365 aaPredicted RBP5.38□□□□□ -1.55
USP28-203ENST00000537490 C9orf62Q8N4C0 152 aa5.38□□□□□ -1.55
USP28-203ENST00000537490 NUDT10Q8NFP7 164 aa5.38□□□□□ -1.55
USP28-203ENST00000537490 NUDT11Q96G61 164 aa5.38□□□□□ -1.55
USP28-203ENST00000537490 PGLYRP4Q96LB8 373 aa5.38□□□□□ -1.55
USP28-203ENST00000537490 IGHV3-64A0A075B6Q5 118 aa5.37□□□□□ -1.55
USP28-203ENST00000537490 A0A087WYN8 130 aa5.37□□□□□ -1.55
USP28-203ENST00000537490 UBE2L6O14933 153 aa5.37□□□□□ -1.55
USP28-203ENST00000537490 PDE6DO43924 150 aa5.37□□□□□ -1.55
USP28-203ENST00000537490 AMTP48728 403 aa5.37□□□□□ -1.55
USP28-203ENST00000537490 COTL1Q14019 142 aa5.37□□□□□ -1.55
USP28-203ENST00000537490 WDR73Q6P4I2 378 aa5.37□□□□□ -1.55
USP28-203ENST00000537490 GATD1Q8NB37 220 aa5.37□□□□□ -1.55
USP28-203ENST00000537490 DPH3Q96FX2 82 aa5.37□□□□□ -1.55
USP28-203ENST00000537490 AP5S1Q9NUS5 200 aa5.37□□□□□ -1.55
USP28-203ENST00000537490 TRAV26-2A0A0B4J265 109 aa5.36□□□□□ -1.55
USP28-203ENST00000537490 IGKV3OR2-268A0A0C4DH90 116 aa5.36□□□□□ -1.55
USP28-203ENST00000537490 GAGE12HA6NDE8 117 aa5.36□□□□□ -1.55
USP28-203ENST00000537490 TEX46H3BTG2 121 aa5.36□□□□□ -1.55
USP28-203ENST00000537490 BCL2P10415 239 aa5.36□□□□□ -1.55
USP28-203ENST00000537490 CTRLP40313 264 aa5.36□□□□□ -1.55
USP28-203ENST00000537490 TWIST1Q15672 202 aa5.36□□□□□ -1.55
USP28-203ENST00000537490 EIF5AL1Q6IS14 154 aaKnown RBP5.36□□□□□ -1.55
USP28-203ENST00000537490 Q6ZRU5 148 aa5.36□□□□□ -1.55
USP28-203ENST00000537490 C15orf56Q8N910 161 aa5.36□□□□□ -1.55
USP28-203ENST00000537490 RNASE7Q9H1E1 156 aaKnown RBP5.36□□□□□ -1.55
USP28-203ENST00000537490 BIN3Q9NQY0 253 aa5.36□□□□□ -1.55
USP28-203ENST00000537490 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.35□□□□□ -1.55
USP28-203ENST00000537490 K7EN84 100 aa5.35□□□□□ -1.55
USP28-203ENST00000537490 FOXA3P55318 350 aaPredicted RBP5.35□□□□□ -1.55
USP28-203ENST00000537490 HIGD2BQ4VC39 106 aa5.35□□□□□ -1.55
USP28-203ENST00000537490 Q6ZNX1 250 aa5.35□□□□□ -1.55
USP28-203ENST00000537490 OCC1Q8TAD7 63 aa5.35□□□□□ -1.55
USP28-203ENST00000537490 SPACA4Q8TDM5 124 aa5.35□□□□□ -1.55
USP28-203ENST00000537490 RPL39LQ96EH5 51 aaKnown RBP5.35□□□□□ -1.55
USP28-203ENST00000537490 RNF185Q96GF1 192 aa5.35□□□□□ -1.55
USP28-203ENST00000537490 CNFNQ9BYD5 112 aa5.35□□□□□ -1.55
USP28-203ENST00000537490 RPP21Q9H633 154 aaKnown RBP5.35□□□□□ -1.55
USP28-203ENST00000537490 HMCN2Q8NDA2 5059 aa5.34□□□□□ -1.55
USP28-203ENST00000537490 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.34□□□□□ -1.55
USP28-203ENST00000537490 IGKV2-29A2NJV5 120 aaPredicted RBP5.34□□□□□ -1.55
USP28-203ENST00000537490 RPS10P46783 165 aaKnown RBP5.34□□□□□ -1.55
USP28-203ENST00000537490 COX6A2Q02221 97 aa5.34□□□□□ -1.55
USP28-203ENST00000537490 CFAP161Q6P656 301 aa5.34□□□□□ -1.55
USP28-203ENST00000537490 PRSS3P2Q8NHM4 247 aa5.34□□□□□ -1.55
USP28-203ENST00000537490 GTSF1Q8WW33 167 aa5.34□□□□□ -1.55
USP28-203ENST00000537490 CHCHD10Q8WYQ3 142 aaPredicted RBP5.34□□□□□ -1.55
USP28-203ENST00000537490 PLAC8Q9NZF1 115 aa5.34□□□□□ -1.55
USP28-203ENST00000537490 PHOX2AO14813 284 aa5.33□□□□□ -1.56
USP28-203ENST00000537490 NCR2O95944 276 aa5.33□□□□□ -1.56
USP28-203ENST00000537490 GHRHP01286 108 aa5.33□□□□□ -1.56
USP28-203ENST00000537490 AMMECR1LQ6DCA0 310 aa5.33□□□□□ -1.56
USP28-203ENST00000537490 RNASEKQ6P5S7 137 aaKnown RBP5.33□□□□□ -1.56
USP28-203ENST00000537490 SLC51BQ86UW2 128 aa5.33□□□□□ -1.56
USP28-203ENST00000537490 PKHD1L1Q86WI1 4243 aa5.33□□□□□ -1.56
USP28-203ENST00000537490 IGKV2-24A0A0C4DH68 120 aa5.32□□□□□ -1.56
USP28-203ENST00000537490 FAM231BA6NCW3 169 aa5.32□□□□□ -1.56
USP28-203ENST00000537490 SDHAF1A6NFY7 115 aa5.32□□□□□ -1.56
USP28-203ENST00000537490 NDUFS6O75380 124 aaKnown RBP5.32□□□□□ -1.56
USP28-203ENST00000537490 GAS8-AS1O95177 125 aa5.32□□□□□ -1.56
USP28-203ENST00000537490 FGF6P10767 208 aa5.32□□□□□ -1.56
USP28-203ENST00000537490 FOXI1Q12951 378 aa5.32□□□□□ -1.56
USP28-203ENST00000537490 MAJINQ3KP22 176 aa5.32□□□□□ -1.56
USP28-203ENST00000537490 TCTE3Q8IZS6 198 aa5.32□□□□□ -1.56
USP28-203ENST00000537490 GVQW2A0A096LPI5 108 aaPredicted RBP5.31□□□□□ -1.56
USP28-203ENST00000537490 H7C423 109 aa5.31□□□□□ -1.56
USP28-203ENST00000537490 GATCO43716 136 aaKnown RBP5.31□□□□□ -1.56
USP28-203ENST00000537490 APCSP02743 223 aa5.31□□□□□ -1.56
USP28-203ENST00000537490 PMCHP20382 165 aa5.31□□□□□ -1.56
USP28-203ENST00000537490 TAGLN2P37802 199 aaKnown RBP5.31□□□□□ -1.56
USP28-203ENST00000537490 SMIM15Q7Z3B0 74 aa5.31□□□□□ -1.56
USP28-203ENST00000537490 STPG4Q8N801 248 aa5.31□□□□□ -1.56
USP28-203ENST00000537490 OR5A1Q8NGJ0 315 aa5.31□□□□□ -1.56
USP28-203ENST00000537490 C7orf33Q8WU49 177 aa5.31□□□□□ -1.56
USP28-203ENST00000537490 A0A096LNI7 61 aa5.3□□□□□ -1.56
USP28-203ENST00000537490 TRBV6-5A0A0K0K1A5 114 aa5.3□□□□□ -1.56
USP28-203ENST00000537490 LINC00959A0A1B0GUT2 108 aa5.3□□□□□ -1.56
USP28-203ENST00000537490 I3L3M4 83 aa5.3□□□□□ -1.56
USP28-203ENST00000537490 ESDP10768 282 aa5.3□□□□□ -1.56
USP28-203ENST00000537490 TEX261Q6UWH6 196 aa5.3□□□□□ -1.56
USP28-203ENST00000537490 FAM231DQ6ZW35 169 aa5.3□□□□□ -1.56
USP28-203ENST00000537490 LYPD6BQ8NI32 183 aa5.3□□□□□ -1.56
USP28-203ENST00000537490 LINC00526Q96FQ7 95 aa5.3□□□□□ -1.56
USP28-203ENST00000537490 A8MWL6 223 aa5.29□□□□□ -1.56
USP28-203ENST00000537490 CCL25O15444 150 aa5.29□□□□□ -1.56
USP28-203ENST00000537490 TSHBP01222 138 aa5.29□□□□□ -1.56
USP28-203ENST00000537490 ZNF25P17030 456 aaPredicted RBP5.29□□□□□ -1.56
USP28-203ENST00000537490 XCL1P47992 114 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms