RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 RPL35P42766 123 aaKnown RBP9□□□□□ -0.97
LPCAT3-206ENST00000537179 EPDR1Q9UM22 224 aa9□□□□□ -0.97
LPCAT3-206ENST00000537179 TMSB15BA0A087X1C1 80 aa8.99□□□□□ -0.97
LPCAT3-206ENST00000537179 TRAV34A0A0B4J273 112 aa8.99□□□□□ -0.97
LPCAT3-206ENST00000537179 IGKV3OR2-268A0A0C4DH90 116 aa8.99□□□□□ -0.97
LPCAT3-206ENST00000537179 ARL14EPLP0DKL9 152 aa8.99□□□□□ -0.97
LPCAT3-206ENST00000537179 CRIP1P50238 77 aa8.99□□□□□ -0.97
LPCAT3-206ENST00000537179 AKR1D1P51857 326 aa8.99□□□□□ -0.97
LPCAT3-206ENST00000537179 GAGE2BQ13066 116 aa8.99□□□□□ -0.97
LPCAT3-206ENST00000537179 PHF5AQ7RTV0 110 aaKnown RBP8.99□□□□□ -0.97
LPCAT3-206ENST00000537179 TMEM243Q9BU79 118 aa8.99□□□□□ -0.97
LPCAT3-206ENST00000537179 SH2D1AO60880 128 aa8.98□□□□□ -0.97
LPCAT3-206ENST00000537179 CHCHD10Q8WYQ3 142 aaPredicted RBP8.98□□□□□ -0.97
LPCAT3-206ENST00000537179 A0A1W2PPV4 95 aa8.97□□□□□ -0.97
LPCAT3-206ENST00000537179 F5H697 171 aa8.97□□□□□ -0.97
LPCAT3-206ENST00000537179 SUMO1P63165 101 aaKnown RBP8.97□□□□□ -0.97
LPCAT3-206ENST00000537179 C9orf116Q5BN46 136 aaPredicted RBP8.97□□□□□ -0.97
LPCAT3-206ENST00000537179 Q86TA4 180 aa8.97□□□□□ -0.97
LPCAT3-206ENST00000537179 C9orf62Q8N4C0 152 aa8.97□□□□□ -0.97
LPCAT3-206ENST00000537179 CDIP1Q9H305 208 aa8.97□□□□□ -0.97
LPCAT3-206ENST00000537179 OR10AG1Q8NH19 301 aa8.96□□□□□ -0.98
LPCAT3-206ENST00000537179 EIF5AP63241 154 aaKnown RBP8.95□□□□□ -0.98
LPCAT3-206ENST00000537179 LINC01559Q495D7 138 aa8.95□□□□□ -0.98
LPCAT3-206ENST00000537179 SFT2D1Q8WV19 159 aa8.95□□□□□ -0.98
LPCAT3-206ENST00000537179 SDHCQ99643 169 aaPredicted RBP8.95□□□□□ -0.98
LPCAT3-206ENST00000537179 HSPB11Q9Y547 144 aa8.95□□□□□ -0.98
LPCAT3-206ENST00000537179 LOC107984640A0A0U1RRK4 108 aa8.94□□□□□ -0.98
LPCAT3-206ENST00000537179 FOXI1Q12951 378 aa8.94□□□□□ -0.98
LPCAT3-206ENST00000537179 UBE2L6O14933 153 aa8.93□□□□□ -0.98
LPCAT3-206ENST00000537179 SYCNQ0VAF6 134 aa8.93□□□□□ -0.98
LPCAT3-206ENST00000537179 TPRXLQ17RH7 258 aa8.93□□□□□ -0.98
LPCAT3-206ENST00000537179 ZNF674Q2M3X9 581 aa8.93□□□□□ -0.98
LPCAT3-206ENST00000537179 FAM162BQ5T6X4 162 aa8.93□□□□□ -0.98
LPCAT3-206ENST00000537179 KRTAP11-1Q8IUC1 163 aa8.93□□□□□ -0.98
LPCAT3-206ENST00000537179 C2orf88Q9BSF0 95 aa8.93□□□□□ -0.98
LPCAT3-206ENST00000537179 STAG3L2P0CL84 134 aa8.92□□□□□ -0.98
LPCAT3-206ENST00000537179 STAG3L3P0CL85 134 aa8.92□□□□□ -0.98
LPCAT3-206ENST00000537179 GCHFRP30047 84 aa8.92□□□□□ -0.98
LPCAT3-206ENST00000537179 TRIQKQ629K1 86 aa8.92□□□□□ -0.98
LPCAT3-206ENST00000537179 RETNLBQ9BQ08 111 aa8.92□□□□□ -0.98
LPCAT3-206ENST00000537179 SSBP4Q9BWG4 385 aaPredicted RBP8.92□□□□□ -0.98
LPCAT3-206ENST00000537179 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.91□□□□□ -0.98
LPCAT3-206ENST00000537179 BCL2P10415 239 aa8.91□□□□□ -0.98
LPCAT3-206ENST00000537179 RPL12P30050 165 aaKnown RBP8.91□□□□□ -0.98
LPCAT3-206ENST00000537179 SCGB1C1Q8TD33 95 aa8.91□□□□□ -0.98
LPCAT3-206ENST00000537179 ZNF471Q9BX82 626 aaPredicted RBP8.91□□□□□ -0.98
LPCAT3-206ENST00000537179 NUDT15Q9NV35 164 aa8.91□□□□□ -0.98
LPCAT3-206ENST00000537179 CARHSP1Q9Y2V2 147 aaKnown RBP8.91□□□□□ -0.98
LPCAT3-206ENST00000537179 A0A087WZ39 114 aa8.9□□□□□ -0.98
LPCAT3-206ENST00000537179 IGHV1-58A0A0C4DH39 117 aa8.9□□□□□ -0.98
LPCAT3-206ENST00000537179 HSBP1L1C9JCN9 74 aa8.9□□□□□ -0.98
LPCAT3-206ENST00000537179 H0YIZ8 118 aa8.9□□□□□ -0.98
LPCAT3-206ENST00000537179 CDC34P49427 236 aaPredicted RBP8.9□□□□□ -0.98
LPCAT3-206ENST00000537179 LCE2CQ5TA81 110 aa8.9□□□□□ -0.98
LPCAT3-206ENST00000537179 COX8CQ7Z4L0 72 aa8.9□□□□□ -0.98
LPCAT3-206ENST00000537179 MLST8Q9BVC4 326 aa8.9□□□□□ -0.98
LPCAT3-206ENST00000537179 NIT2Q9NQR4 276 aa8.9□□□□□ -0.98
LPCAT3-206ENST00000537179 MUC21A0A140T8X8 626 aa8.89□□□□□ -0.99
LPCAT3-206ENST00000537179 FGF6P10767 208 aa8.89□□□□□ -0.99
LPCAT3-206ENST00000537179 LRRC37A5PQ49AS3 106 aa8.89□□□□□ -0.99
LPCAT3-206ENST00000537179 PGLYRP4Q96LB8 373 aa8.89□□□□□ -0.99
LPCAT3-206ENST00000537179 SMIM3Q9BZL3 60 aa8.89□□□□□ -0.99
LPCAT3-206ENST00000537179 M0QY20 66 aa8.88□□□□□ -0.99
LPCAT3-206ENST00000537179 CAMPP49913 170 aa8.88□□□□□ -0.99
LPCAT3-206ENST00000537179 C21orf62-AS1Q17RA5 79 aa8.88□□□□□ -0.99
LPCAT3-206ENST00000537179 RPP21Q9H633 154 aaKnown RBP8.88□□□□□ -0.99
LPCAT3-206ENST00000537179 ZNF561-AS1K7EIQ3 104 aa8.87□□□□□ -0.99
LPCAT3-206ENST00000537179 PEX7O00628 323 aa8.87□□□□□ -0.99
LPCAT3-206ENST00000537179 CRYGAP11844 174 aa8.87□□□□□ -0.99
LPCAT3-206ENST00000537179 XCL1P47992 114 aa8.87□□□□□ -0.99
LPCAT3-206ENST00000537179 MZT2BQ6NZ67 158 aa8.87□□□□□ -0.99
LPCAT3-206ENST00000537179 MED28Q9H204 178 aa8.87□□□□□ -0.99
LPCAT3-206ENST00000537179 A0A1B0GV90 55 aa8.86□□□□□ -0.99
LPCAT3-206ENST00000537179 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.86□□□□□ -0.99
LPCAT3-206ENST00000537179 TCAPO15273 167 aa8.86□□□□□ -0.99
LPCAT3-206ENST00000537179 SNAI2O43623 268 aa8.86□□□□□ -0.99
LPCAT3-206ENST00000537179 SMIM17P0DL12 118 aa8.86□□□□□ -0.99
LPCAT3-206ENST00000537179 MEF2BQ02080 365 aaPredicted RBP8.86□□□□□ -0.99
LPCAT3-206ENST00000537179 RPL18AQ02543 176 aaKnown RBP8.86□□□□□ -0.99
LPCAT3-206ENST00000537179 SPANXN1Q5VSR9 72 aa8.86□□□□□ -0.99
LPCAT3-206ENST00000537179 SUMO4Q6EEV6 95 aa8.86□□□□□ -0.99
LPCAT3-206ENST00000537179 RAB24Q969Q5 203 aa8.86□□□□□ -0.99
LPCAT3-206ENST00000537179 MARVELD1Q9BSK0 173 aa8.86□□□□□ -0.99
LPCAT3-206ENST00000537179 TMEM167BQ9NRX6 74 aa8.86□□□□□ -0.99
LPCAT3-206ENST00000537179 APOMO95445 188 aa8.85□□□□□ -0.99
LPCAT3-206ENST00000537179 MBP02144 154 aa8.85□□□□□ -0.99
LPCAT3-206ENST00000537179 MGPP08493 103 aa8.85□□□□□ -0.99
LPCAT3-206ENST00000537179 LINC00614P0C842 121 aa8.85□□□□□ -0.99
LPCAT3-206ENST00000537179 NUP35Q8NFH5 326 aa8.85□□□□□ -0.99
LPCAT3-206ENST00000537179 AP1S3Q96PC3 154 aa8.85□□□□□ -0.99
LPCAT3-206ENST00000537179 ZFP30Q9Y2G7 519 aa8.85□□□□□ -0.99
LPCAT3-206ENST00000537179 A0A1W2PRE2 83 aa8.84□□□□□ -0.99
LPCAT3-206ENST00000537179 C5orf52A6NGY3 159 aa8.84□□□□□ -0.99
LPCAT3-206ENST00000537179 ISOC2Q96AB3 205 aa8.84□□□□□ -0.99
LPCAT3-206ENST00000537179 KRTAP4-1Q9BYQ7 146 aa8.84□□□□□ -0.99
LPCAT3-206ENST00000537179 NKX6-2Q9C056 277 aaPredicted RBP8.84□□□□□ -0.99
LPCAT3-206ENST00000537179 WFDC1Q9HC57 220 aa8.84□□□□□ -0.99
LPCAT3-206ENST00000537179 ALG5Q9Y673 324 aa8.84□□□□□ -0.99
LPCAT3-206ENST00000537179 IGLV4-69A0A075B6H9 119 aa8.83□□□□□ -1
LPCAT3-206ENST00000537179 CCL25O15444 150 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms