RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 FOXA3P55318 350 aaPredicted RBP9.74□□□□□ -0.85
UBC-204ENST00000536661 FAM210AQ96ND0 272 aa9.74□□□□□ -0.85
UBC-204ENST00000536661 SMIM7Q9BQ49 75 aa9.74□□□□□ -0.85
UBC-204ENST00000536661 IGLV4-60A0A075B6I1 120 aa9.73□□□□□ -0.85
UBC-204ENST00000536661 A8MWL6 223 aa9.73□□□□□ -0.85
UBC-204ENST00000536661 NDUFS6O75380 124 aaKnown RBP9.73□□□□□ -0.85
UBC-204ENST00000536661 REG3AQ06141 175 aa9.73□□□□□ -0.85
UBC-204ENST00000536661 COTL1Q14019 142 aa9.73□□□□□ -0.85
UBC-204ENST00000536661 SCXQ7RTU7 201 aa9.73□□□□□ -0.85
UBC-204ENST00000536661 RPL39LQ96EH5 51 aaKnown RBP9.73□□□□□ -0.85
UBC-204ENST00000536661 GFRA4Q9GZZ7 299 aa9.73□□□□□ -0.85
UBC-204ENST00000536661 IGLV10-54A0A075B6I4 117 aa9.72□□□□□ -0.85
UBC-204ENST00000536661 A0A1B0GUV1 79 aa9.72□□□□□ -0.85
UBC-204ENST00000536661 SRP19P09132 144 aaKnown RBP9.72□□□□□ -0.85
UBC-204ENST00000536661 AMTP48728 403 aa9.72□□□□□ -0.85
UBC-204ENST00000536661 CT83Q5H943 113 aa9.72□□□□□ -0.85
UBC-204ENST00000536661 SMIM15Q7Z3B0 74 aa9.72□□□□□ -0.85
UBC-204ENST00000536661 LINC01551Q86U37 167 aa9.72□□□□□ -0.85
UBC-204ENST00000536661 FLG2Q5D862 2391 aaPredicted RBP9.72□□□□□ -0.85
UBC-204ENST00000536661 ZNF727A8MUV8 499 aa9.71□□□□□ -0.86
UBC-204ENST00000536661 PRSS1P07477 247 aa9.71□□□□□ -0.86
UBC-204ENST00000536661 LINC00528Q8N1L1 170 aa9.71□□□□□ -0.86
UBC-204ENST00000536661 DMBT1Q9UGM3 2413 aaPredicted RBP9.7□□□□□ -0.86
UBC-204ENST00000536661 UBE2L6O14933 153 aa9.7□□□□□ -0.86
UBC-204ENST00000536661 CHAC1Q9BUX1 264 aa9.69□□□□□ -0.86
UBC-204ENST00000536661 TRAV8-4A0A0B4J246 113 aa9.68□□□□□ -0.86
UBC-204ENST00000536661 HIGD1CA8MV81 97 aa9.68□□□□□ -0.86
UBC-204ENST00000536661 CIRBP-AS1Q8TBR5 109 aa9.68□□□□□ -0.86
UBC-204ENST00000536661 TSKUQ8WUA8 353 aa9.68□□□□□ -0.86
UBC-204ENST00000536661 BORCS7Q96B45 105 aa9.68□□□□□ -0.86
UBC-204ENST00000536661 OSTCQ9NRP0 149 aa9.68□□□□□ -0.86
UBC-204ENST00000536661 A0A1B0GUT8 65 aa9.67□□□□□ -0.86
UBC-204ENST00000536661 SDHAF1A6NFY7 115 aa9.67□□□□□ -0.86
UBC-204ENST00000536661 GAS8-AS1O95177 125 aa9.67□□□□□ -0.86
UBC-204ENST00000536661 NCR2O95944 276 aa9.67□□□□□ -0.86
UBC-204ENST00000536661 PLA2G1BP04054 148 aaKnown RBP9.67□□□□□ -0.86
UBC-204ENST00000536661 TEX261Q6UWH6 196 aa9.67□□□□□ -0.86
UBC-204ENST00000536661 APCSP02743 223 aa9.66□□□□□ -0.86
UBC-204ENST00000536661 DGAT2L7PQ6IED9 249 aa9.66□□□□□ -0.86
UBC-204ENST00000536661 V9GYV3 84 aa9.66□□□□□ -0.86
UBC-204ENST00000536661 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.65□□□□□ -0.86
UBC-204ENST00000536661 TRBV6-5A0A0K0K1A5 114 aa9.65□□□□□ -0.86
UBC-204ENST00000536661 IGKV2-29A2NJV5 120 aaPredicted RBP9.65□□□□□ -0.86
UBC-204ENST00000536661 FAM231BA6NCW3 169 aa9.65□□□□□ -0.86
UBC-204ENST00000536661 C9JQL5 133 aa9.65□□□□□ -0.86
UBC-204ENST00000536661 C9orf163Q8N9P6 203 aa9.65□□□□□ -0.86
UBC-204ENST00000536661 ISOC2Q96AB3 205 aa9.65□□□□□ -0.86
UBC-204ENST00000536661 RNF185Q96GF1 192 aa9.65□□□□□ -0.86
UBC-204ENST00000536661 TMEM191AQ9H0A3 160 aa9.65□□□□□ -0.86
UBC-204ENST00000536661 IGKV3OR2-268A0A0C4DH90 116 aa9.64□□□□□ -0.87
UBC-204ENST00000536661 RPL23P62829 140 aaKnown RBP9.64□□□□□ -0.87
UBC-204ENST00000536661 AMMECR1LQ6DCA0 310 aa9.64□□□□□ -0.87
UBC-204ENST00000536661 CLRN3Q8NCR9 226 aa9.64□□□□□ -0.87
UBC-204ENST00000536661 hDV102S1A0JD36 115 aa9.63□□□□□ -0.87
UBC-204ENST00000536661 I3L3M4 83 aa9.63□□□□□ -0.87
UBC-204ENST00000536661 RAB4AP20338 218 aa9.63□□□□□ -0.87
UBC-204ENST00000536661 PMCHP20382 165 aa9.63□□□□□ -0.87
UBC-204ENST00000536661 RPS10P46783 165 aaKnown RBP9.63□□□□□ -0.87
UBC-204ENST00000536661 SRSF3P84103 164 aaKnown RBP9.63□□□□□ -0.87
UBC-204ENST00000536661 TMEM241Q24JQ0 296 aa9.63□□□□□ -0.87
UBC-204ENST00000536661 FAM74A3Q4VXF1 159 aa9.63□□□□□ -0.87
UBC-204ENST00000536661 RNASEKQ6P5S7 137 aaKnown RBP9.63□□□□□ -0.87
UBC-204ENST00000536661 AMN1Q8IY45 258 aa9.63□□□□□ -0.87
UBC-204ENST00000536661 NUP35Q8NFH5 326 aa9.63□□□□□ -0.87
UBC-204ENST00000536661 TMEM242Q9NWH2 141 aa9.63□□□□□ -0.87
UBC-204ENST00000536661 GAGE12HA6NDE8 117 aa9.62□□□□□ -0.87
UBC-204ENST00000536661 H7C423 109 aa9.62□□□□□ -0.87
UBC-204ENST00000536661 TSHBP01222 138 aa9.62□□□□□ -0.87
UBC-204ENST00000536661 FGF6P10767 208 aa9.62□□□□□ -0.87
UBC-204ENST00000536661 KRTAP10-4P60372 401 aaPredicted RBP9.62□□□□□ -0.87
UBC-204ENST00000536661 CNBPP62633 177 aaKnown RBP9.62□□□□□ -0.87
UBC-204ENST00000536661 ADIRFQ15847 76 aa9.62□□□□□ -0.87
UBC-204ENST00000536661 MRAP2Q96G30 205 aa9.62□□□□□ -0.87
UBC-204ENST00000536661 ST20Q9HBF5 79 aa9.62□□□□□ -0.87
UBC-204ENST00000536661 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.62□□□□□ -0.87
UBC-204ENST00000536661 ESDP10768 282 aa9.61□□□□□ -0.87
UBC-204ENST00000536661 RIGQ13278 110 aa9.61□□□□□ -0.87
UBC-204ENST00000536661 C15orf56Q8N910 161 aa9.61□□□□□ -0.87
UBC-204ENST00000536661 NAT8Q9UHE5 227 aa9.61□□□□□ -0.87
UBC-204ENST00000536661 SMKR1H3BMG3 65 aa9.6□□□□□ -0.87
UBC-204ENST00000536661 PANO1I0J062 215 aa9.6□□□□□ -0.87
UBC-204ENST00000536661 SLPIP03973 132 aa9.6□□□□□ -0.87
UBC-204ENST00000536661 ZNF25P17030 456 aaPredicted RBP9.6□□□□□ -0.87
UBC-204ENST00000536661 POLR2KP53803 58 aaKnown RBP9.6□□□□□ -0.87
UBC-204ENST00000536661 SDIM1Q6ZPB5 146 aa9.6□□□□□ -0.87
UBC-204ENST00000536661 PEA15Q15121 130 aa9.59□□□□□ -0.87
UBC-204ENST00000536661 CHCHD10Q8WYQ3 142 aaPredicted RBP9.59□□□□□ -0.87
UBC-204ENST00000536661 AP5S1Q9NUS5 200 aa9.59□□□□□ -0.87
UBC-204ENST00000536661 NAT8BQ9UHF3 227 aa9.59□□□□□ -0.87
UBC-204ENST00000536661 LRP1Q07954 4544 aaKnown RBP9.59□□□□□ -0.87
UBC-204ENST00000536661 TRBV27A0A0K0K1C4 114 aa9.58□□□□□ -0.88
UBC-204ENST00000536661 OR5A1Q8NGJ0 315 aa9.58□□□□□ -0.88
UBC-204ENST00000536661 BTF3L4Q96K17 158 aa9.58□□□□□ -0.88
UBC-204ENST00000536661 PKHD1L1Q86WI1 4243 aa9.58□□□□□ -0.88
UBC-204ENST00000536661 SMIM27A0A1W2PRY6 76 aa9.57□□□□□ -0.88
UBC-204ENST00000536661 NRACQ8N912 160 aa9.57□□□□□ -0.88
UBC-204ENST00000536661 SMDT1Q9H4I9 107 aa9.57□□□□□ -0.88
UBC-204ENST00000536661 FAT3Q8TDW7 4589 aa9.57□□□□□ -0.88
UBC-204ENST00000536661 IGHV3-64A0A075B6Q5 118 aa9.56□□□□□ -0.88
UBC-204ENST00000536661 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms