RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 SFTA3P0C7M3 94 aa3.19□□□□□ -1.9
CLIP1-207ENST00000536634 AKR1C4P17516 323 aa3.19□□□□□ -1.9
CLIP1-207ENST00000536634 SULT1A1P50225 295 aa3.19□□□□□ -1.9
CLIP1-207ENST00000536634 BAXQ07812 192 aa3.19□□□□□ -1.9
CLIP1-207ENST00000536634 C10orf126Q8N4M7 172 aa3.19□□□□□ -1.9
CLIP1-207ENST00000536634 MRAP2Q96G30 205 aa3.19□□□□□ -1.9
CLIP1-207ENST00000536634 TRGV9Q99603 122 aa3.19□□□□□ -1.9
CLIP1-207ENST00000536634 RBKSQ9H477 322 aa3.19□□□□□ -1.9
CLIP1-207ENST00000536634 PRO0255Q9UI72 69 aa3.19□□□□□ -1.9
CLIP1-207ENST00000536634 KLF12Q9Y4X4 402 aa3.19□□□□□ -1.9
CLIP1-207ENST00000536634 TRAV5A0A0B4J249 113 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 TRAV12-3A0A0B4J271 114 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 A0A0J9YXY3 114 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 KANTRA0A1W2PQU2 76 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 IGSF23A1L1A6 192 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 NAP1L6A6NFF2 107 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 SMIM17P0DL12 118 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 ORM2P19652 201 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 SRIP30626 198 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 RPS10P46783 165 aaKnown RBP3.18□□□□□ -1.9
CLIP1-207ENST00000536634 AKR1C1Q04828 323 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 MRPL23Q16540 153 aaKnown RBP3.18□□□□□ -1.9
CLIP1-207ENST00000536634 LINC01556Q5JQF7 62 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 ACOT7LQ6ZUV0 252 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 ZNF546Q86UE3 836 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 LHFPL1Q86WI0 220 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 NIT1Q86X76 327 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 LGI3Q8N145 548 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 ISOC2Q96AB3 205 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 TMEM101Q96IK0 257 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.18□□□□□ -1.9
CLIP1-207ENST00000536634 LYRM2Q9NU23 88 aaPredicted RBP3.18□□□□□ -1.9
CLIP1-207ENST00000536634 MRPL16Q9NX20 251 aaKnown RBP3.18□□□□□ -1.9
CLIP1-207ENST00000536634 FLVCR2Q9UPI3 526 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 PSG8Q9UQ74 426 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 HHLA3Q9XRX5 114 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 C14orf166Q9Y224 244 aaKnown RBP3.18□□□□□ -1.9
CLIP1-207ENST00000536634 FSIP2Q5CZC0 6907 aa3.18□□□□□ -1.9
CLIP1-207ENST00000536634 FXYD6-FXYD2A0A087WZ82 144 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 LOC100131303A0A0U1RQF7 123 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 H3BRN7 92 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 M0R036 132 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 CDS2O95674 445 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 IGHV3-30P01768 117 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 IGHV3-33P01772 117 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 TRGC1P0CF51 173 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 IGHV3-30-3P0DP02 117 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 IGHV3-30-5P0DP03 117 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 PRSS3P35030 304 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 TCL1AP56279 114 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 GCSAMLQ5JQS6 135 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 TEX43Q6ZNM6 134 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 Q6ZQT7 251 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 Q6ZRU5 148 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 ERASQ7Z444 233 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 BLNKQ8WV28 456 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 PTH2Q96A98 100 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 NAT8Q9UHE5 227 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 TNFSF18Q9UNG2 199 aa3.17□□□□□ -1.9
CLIP1-207ENST00000536634 GABARAPH6UMI1 98 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 M0QXV9 152 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 SLC17A3O00476 420 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 MRPS12O15235 138 aaKnown RBP3.16□□□□□ -1.9
CLIP1-207ENST00000536634 PDE6DO43924 150 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 ESDP10768 282 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 ELOBQ15370 118 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 VAMP3Q15836 100 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 ACOT6Q3I5F7 207 aaPredicted RBP3.16□□□□□ -1.9
CLIP1-207ENST00000536634 UBE2NLQ5JXB2 153 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 TOMM5Q8N4H5 51 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 C20orf203Q8NBC4 194 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 LYPD6BQ8NI32 183 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 BAALCQ8WXS3 180 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 S100A16Q96FQ6 103 aaKnown RBP3.16□□□□□ -1.9
CLIP1-207ENST00000536634 GPR82Q96P67 336 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 SIGMAR1Q99720 223 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 SHANK2-AS3Q9BTD1 123 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 TMEM147Q9BVK8 224 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 MRPL32Q9BYC8 188 aaKnown RBP3.16□□□□□ -1.9
CLIP1-207ENST00000536634 TMEM222Q9H0R3 208 aa3.16□□□□□ -1.9
CLIP1-207ENST00000536634 TRGV4A0A0C4DH28 118 aa3.15□□□□□ -1.91
CLIP1-207ENST00000536634 RBFOX3A6NFN3 312 aa3.15□□□□□ -1.91
CLIP1-207ENST00000536634 TPT1P13693 172 aaKnown RBP3.15□□□□□ -1.91
CLIP1-207ENST00000536634 RPL7P18124 248 aaKnown RBP3.15□□□□□ -1.91
CLIP1-207ENST00000536634 CTRLP40313 264 aa3.15□□□□□ -1.91
CLIP1-207ENST00000536634 S100A10P60903 97 aa3.15□□□□□ -1.91
CLIP1-207ENST00000536634 TMEM183BQ1AE95 376 aa3.15□□□□□ -1.91
CLIP1-207ENST00000536634 PDZD11Q5EBL8 140 aa3.15□□□□□ -1.91
CLIP1-207ENST00000536634 PRR9Q5T870 116 aa3.15□□□□□ -1.91
CLIP1-207ENST00000536634 TMEM252Q8N6L7 170 aa3.15□□□□□ -1.91
CLIP1-207ENST00000536634 FER1L6-AS1Q8NA97 138 aa3.15□□□□□ -1.91
CLIP1-207ENST00000536634 MARCH1Q8TCQ1 289 aa3.15□□□□□ -1.91
CLIP1-207ENST00000536634 DNAJC30Q96LL9 226 aa3.15□□□□□ -1.91
CLIP1-207ENST00000536634 CIB3Q96Q77 187 aaPredicted RBP3.15□□□□□ -1.91
CLIP1-207ENST00000536634 IMMP2LQ96T52 175 aa3.15□□□□□ -1.91
CLIP1-207ENST00000536634 PSMG3Q9BT73 122 aaPredicted RBP3.15□□□□□ -1.91
CLIP1-207ENST00000536634 SMDT1Q9H4I9 107 aa3.15□□□□□ -1.91
CLIP1-207ENST00000536634 NAA60Q9H7X0 242 aa3.15□□□□□ -1.91
CLIP1-207ENST00000536634 SPANXA1Q9NS26 97 aa3.15□□□□□ -1.91
CLIP1-207ENST00000536634 SS18L2Q9UHA2 77 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms